Abstract
The natural biotic capacity of soils to degrade gamma-hexachlorocyclohexane (gamma-HCH, lindane) was estimated using an enrichment technique based on the ability of soil bacteria to develop on synthetic media and degrade the xenobiotic compound, used as the sole source of carbon and energy. Bacterial inocula from relatively highly contaminated soils (from wood treatment factories) were found to promote efficiently the degradation of gamma-HCH, which subsequently permitted isolation of a competent gamma-HCH-degrading microorganism. The decrease of gamma-HCH concurrently with the release of chloride ions and the production of CO2 demonstrated the complete mineralization of gamma-HCH mediated by the isolate. This was confirmed by gas chromatography-mass spectrometry analyses showing that degradation subproducts of gamma-HCH included an unidentified tetrachlorinated compound and subsequently 1,2,4-trichlorobenzene and 2,5-dichlorophenol. The two linA- and linB-like genes coding, respectively, for a gamma-HCH dehydrochlorinase and a dehalogenase were characterized by using a PCR strategy based on sequence homologies with previously published sequences from Sphingomonas paucimobilis UT26. Nucleotide sequence analysis of the linA-like region revealed the presence of a 472-bp open reading frame exhibiting high homology with the linA gene from S. paucimobilis, while a preliminary study also indicated strong homology among the two linB genes. All enzymes involved in the gamma-HCH degradative pathway appear to be extracellular and encoded by genes located on the chromosome, although numerous cryptic plasmids have been detected.
Full Text
The Full Text of this article is available as a PDF (581.1 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Bachmann A., Walet P., Wijnen P., de Bruin W., Huntjens J. L., Roelofsen W., Zehnder A. J. Biodegradation of alpha- and beta-hexachlorocyclohexane in a soil slurry under different redox conditions. Appl Environ Microbiol. 1988 Jan;54(1):143–149. doi: 10.1128/aem.54.1.143-149.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bachmann A., de Bruin W., Jumelet J. C., Rijnaarts H. H., Zehnder A. J. Aerobic biomineralization of alpha-hexachlorocyclohexane in contaminated soil. Appl Environ Microbiol. 1988 Feb;54(2):548–554. doi: 10.1128/aem.54.2.548-554.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bagdasarian M., Lurz R., Rückert B., Franklin F. C., Bagdasarian M. M., Frey J., Timmis K. N. Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene. 1981 Dec;16(1-3):237–247. doi: 10.1016/0378-1119(81)90080-9. [DOI] [PubMed] [Google Scholar]
- Eckhardt T. A rapid method for the identification of plasmid desoxyribonucleic acid in bacteria. Plasmid. 1978 Sep;1(4):584–588. doi: 10.1016/0147-619x(78)90016-1. [DOI] [PubMed] [Google Scholar]
- Francis A. J., Spanggord R. J., Ouchi G. I. Degradation of lindane by Escherichia coli. Appl Microbiol. 1975 Apr;29(4):567–568. doi: 10.1128/am.29.4.567-568.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hardman D. J., Gowland P. C., Slater J. H. Large plasmids from soil bacteria enriched on halogenated alkanoic acids. Appl Environ Microbiol. 1986 Jan;51(1):44–51. doi: 10.1128/aem.51.1.44-51.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hill D. W., McCarty P. L. Anaerobic degradation of selected chlorinated hydrocarbon pesticides. J Water Pollut Control Fed. 1967 Aug;39(8):1259–1277. [PubMed] [Google Scholar]
- Imai R., Nagata Y., Fukuda M., Takagi M., Yano K. Molecular cloning of a Pseudomonas paucimobilis gene encoding a 17-kilodalton polypeptide that eliminates HCl molecules from gamma-hexachlorocyclohexane. J Bacteriol. 1991 Nov;173(21):6811–6819. doi: 10.1128/jb.173.21.6811-6819.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
- MacRae I. C., Raghu K., Bautista E. M. Anaerobic degradation of the insecticide lindane by Clostridium sp. Nature. 1969 Mar 1;221(5183):859–860. doi: 10.1038/221859a0. [DOI] [PubMed] [Google Scholar]
- Macrina F. L., Kopecko D. J., Jones K. R., Ayers D. J., McCowen S. M. A multiple plasmid-containing Escherichia coli strain: convenient source of size reference plasmid molecules. Plasmid. 1978 Jun;1(3):417–420. doi: 10.1016/0147-619x(78)90056-2. [DOI] [PubMed] [Google Scholar]
- Nagata Y., Nariya T., Ohtomo R., Fukuda M., Yano K., Takagi M. Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis. J Bacteriol. 1993 Oct;175(20):6403–6410. doi: 10.1128/jb.175.20.6403-6410.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ohisa N., Yamaguchi M., Kurihara N. Lindane degradation by cell-free extracts of Clostridium rectum. Arch Microbiol. 1980 Apr;125(3):221–225. doi: 10.1007/BF00446880. [DOI] [PubMed] [Google Scholar]
- Sahu S. K., Patnaik K. K., Sharmila M., Sethunathan N. Degradation of Alpha-, Beta-, and Gamma-Hexachlorocyclohexane by a Soil Bacterium under Aerobic Conditions. Appl Environ Microbiol. 1990 Nov;56(11):3620–3622. doi: 10.1128/aem.56.11.3620-3622.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Simonet P., Grosjean M. C., Misra A. K., Nazaret S., Cournoyer B., Normand P. Frankia genus-specific characterization by polymerase chain reaction. Appl Environ Microbiol. 1991 Nov;57(11):3278–3286. doi: 10.1128/aem.57.11.3278-3286.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Smit E., van Elsas J. D., van Veen J. A., de Vos W. M. Detection of Plasmid Transfer from Pseudomonas fluorescens to Indigenous Bacteria in Soil by Using Bacteriophage phiR2f for Donor Counterselection. Appl Environ Microbiol. 1991 Dec;57(12):3482–3488. doi: 10.1128/aem.57.12.3482-3488.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tu C. M. Utilization and degradation of lindane by soil microorganisms. Arch Microbiol. 1976 Jul;108(3):259–263. doi: 10.1007/BF00454850. [DOI] [PubMed] [Google Scholar]
