Abstract
In an effort to localize a gene for ataxia-telangiectasia (A-T), we have genotyped 27 affected Costa Rican families, with 13 markers, in the chromosome 11q22-23 region. Significant linkage disequilibrium was detected for 9/13 markers between D11S1816 and D11S1391. Recombination events observed in these pedigrees places A-T between D11S1819 and D11S1960. One ancestral haplotype is common to 24/54 affected chromosomes and roughly two-thirds of the families. Inferred (ancestral) recombination events involving this common haplotype in earlier generations suggest that A-T is distal to D11S384 and proximal to D11S1960. Several other common haplotypes were identified, consistent with multiple mutations in a single gene. When considered together with all other evidence, this study further sublocalizes the major A-T locus to ≈200 kb, between markers S384 and S535.
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- Ambrose H. J., Byrd P. J., McConville C. M., Cooper P. R., Stankovic T., Riley J. H., Shiloh Y., McNamara J. O., Fukao T., Taylor A. M. A physical map across chromosome 11q22-q23 containing the major locus for ataxia telangiectasia. Genomics. 1994 Jun;21(3):612–619. doi: 10.1006/geno.1994.1321. [DOI] [PubMed] [Google Scholar]
- Foroud T., Wei S., Ziv Y., Sobel E., Lange E., Chao A., Goradia T., Huo Y., Tolun A., Chessa L. Localization of an ataxia-telangiectasia locus to a 3-cM interval on chromosome 11q23: linkage analysis of 111 families by an international consortium. Am J Hum Genet. 1991 Dec;49(6):1263–1279. [PMC free article] [PubMed] [Google Scholar]
- Gatti R. A., Berkel I., Boder E., Braedt G., Charmley P., Concannon P., Ersoy F., Foroud T., Jaspers N. G., Lange K. Localization of an ataxia-telangiectasia gene to chromosome 11q22-23. Nature. 1988 Dec 8;336(6199):577–580. doi: 10.1038/336577a0. [DOI] [PubMed] [Google Scholar]
- Gatti R. A., Boder E., Vinters H. V., Sparkes R. S., Norman A., Lange K. Ataxia-telangiectasia: an interdisciplinary approach to pathogenesis. Medicine (Baltimore) 1991 Mar;70(2):99–117. [PubMed] [Google Scholar]
- Gatti R. A., Lange E., Rotman G., Chen X., Uhrhammer N., Liang T., Chiplunkar S., Yang L., Udar N., Dandekar S. Genetic haplotyping of ataxia-telangiectasia families localizes the major gene to an approximately 850 kb region on chromosome 11q23.1. Int J Radiat Biol. 1994 Dec;66(6 Suppl):S57–S62. [PubMed] [Google Scholar]
- Gatti R. A., McConville C. M., Taylor A. M. Sixth international workshop on ataxia-telangiectasia. Cancer Res. 1994 Nov 15;54(22):6007–6010. [PubMed] [Google Scholar]
- Gyapay G., Morissette J., Vignal A., Dib C., Fizames C., Millasseau P., Marc S., Bernardi G., Lathrop M., Weissenbach J. The 1993-94 Généthon human genetic linkage map. Nat Genet. 1994 Jun;7(2 Spec No):246–339. doi: 10.1038/ng0694supp-246. [DOI] [PubMed] [Google Scholar]
- Hästbacka J., de la Chapelle A., Mahtani M. M., Clines G., Reeve-Daly M. P., Daly M., Hamilton B. A., Kusumi K., Trivedi B., Weaver A. The diastrophic dysplasia gene encodes a novel sulfate transporter: positional cloning by fine-structure linkage disequilibrium mapping. Cell. 1994 Sep 23;78(6):1073–1087. doi: 10.1016/0092-8674(94)90281-x. [DOI] [PubMed] [Google Scholar]
- Jaspers N. G., Gatti R. A., Baan C., Linssen P. C., Bootsma D. Genetic complementation analysis of ataxia telangiectasia and Nijmegen breakage syndrome: a survey of 50 patients. Cytogenet Cell Genet. 1988;49(4):259–263. doi: 10.1159/000132673. [DOI] [PubMed] [Google Scholar]
- Julier C., Gill J., Nakamura Y., Lathrop G. M., Lalouel J. M., White R. Isolation and mapping of a polymorphic DNA sequence (CJ52.193) on chromosome 11 [D11S384]. Nucleic Acids Res. 1989 Nov 25;17(22):9501–9501. doi: 10.1093/nar/17.22.9501. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kerem B., Rommens J. M., Buchanan J. A., Markiewicz D., Cox T. K., Chakravarti A., Buchwald M., Tsui L. C. Identification of the cystic fibrosis gene: genetic analysis. Science. 1989 Sep 8;245(4922):1073–1080. doi: 10.1126/science.2570460. [DOI] [PubMed] [Google Scholar]
- Komatsu K., Kodama S., Okumura Y., Koi M., Oshimura M. Restoration of radiation resistance in ataxia telangiectasia cells by the introduction of normal human chromosome 11. Mutat Res. 1990 Mar;235(2):59–63. doi: 10.1016/0921-8777(90)90058-d. [DOI] [PubMed] [Google Scholar]
- Kwiatkowski D. J., Henske E. P., Weimer K., Ozelius L., Gusella J. F., Haines J. Construction of a GT polymorphism map of human 9q. Genomics. 1992 Feb;12(2):229–240. doi: 10.1016/0888-7543(92)90370-8. [DOI] [PubMed] [Google Scholar]
- Lange E., Borresen A. L., Chen X., Chessa L., Chiplunkar S., Concannon P., Dandekar S., Gerken S., Lange K., Liang T. Localization of an ataxia-telangiectasia gene to an approximately 500-kb interval on chromosome 11q23.1: linkage analysis of 176 families by an international consortium. Am J Hum Genet. 1995 Jul;57(1):112–119. [PMC free article] [PubMed] [Google Scholar]
- Rotman G., Savitski K., Vanagaite L., Bar-Shira A., Ziv Y., Gilad S., Uchenik V., Smith S., Shiloh Y. Physical and genetic mapping at the ATA/ATC locus on chromosome 11q22-23. Int J Radiat Biol. 1994 Dec;66(6 Suppl):S63–S66. [PubMed] [Google Scholar]
- Sanal O., Wei S., Foroud T., Malhotra U., Concannon P., Charmley P., Salser W., Lange K., Gatti R. A. Further mapping of an ataxia-telangiectasia locus to the chromosome 11q23 region. Am J Hum Genet. 1990 Nov;47(5):860–866. [PMC free article] [PubMed] [Google Scholar]
- Spielman R. S., McGinnis R. E., Ewens W. J. Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM). Am J Hum Genet. 1993 Mar;52(3):506–516. [PMC free article] [PubMed] [Google Scholar]
- Straub R. E., Speer M. C., Luo Y., Rojas K., Overhauser J., Ott J., Gilliam T. C. A microsatellite genetic linkage map of human chromosome 18. Genomics. 1993 Jan;15(1):48–56. doi: 10.1006/geno.1993.1008. [DOI] [PubMed] [Google Scholar]
- Sulisalo T., Klockars J., Mäkitie O., Francomano C. A., de la Chapelle A., Kaitila I., Sistonen P. High-resolution linkage-disequilibrium mapping of the cartilage-hair hypoplasia gene. Am J Hum Genet. 1994 Nov;55(5):937–945. [PMC free article] [PubMed] [Google Scholar]
- Swift M., Morrell D., Massey R. B., Chase C. L. Incidence of cancer in 161 families affected by ataxia-telangiectasia. N Engl J Med. 1991 Dec 26;325(26):1831–1836. doi: 10.1056/NEJM199112263252602. [DOI] [PubMed] [Google Scholar]
- Taylor A. M., McConville C. M., Rotman G., Shiloh Y., Byrd P. J. A haplotype common to intermediate radiosensitivity variants of ataxia-telangiectasia in the UK. Int J Radiat Biol. 1994 Dec;66(6 Suppl):S35–S41. [PubMed] [Google Scholar]
- Terwilliger J. D., Ott J. A haplotype-based 'haplotype relative risk' approach to detecting allelic associations. Hum Hered. 1992;42(6):337–346. doi: 10.1159/000154096. [DOI] [PubMed] [Google Scholar]
- Uhrhammer N., Concannon P., Huo Y., Nakamura Y., Gatti R. A. A pulsed-field gel electrophoresis map in the ataxia-telangiectasia region of chromosome 11q22.3. Genomics. 1994 Mar 15;20(2):278–280. doi: 10.1006/geno.1994.1165. [DOI] [PubMed] [Google Scholar]
- Ziv Y., Rotman G., Frydman M., Dagan J., Cohen T., Foroud T., Gatti R. A., Shiloh Y. The ATC (ataxia-telangiectasia complementation group C) locus localizes to 11q22-q23. Genomics. 1991 Feb;9(2):373–375. doi: 10.1016/0888-7543(91)90268-j. [DOI] [PubMed] [Google Scholar]

