Abstract
DNA sequence analysis of regions from plasmid pIP417 and chromosome BF8 which encode 5-nitroimidazole resistance in Bacteroides strains allowed the identification of two open reading frames corresponding to new genes, nimA (528 bp) and nimB (492 bp). Either gene may confer 5-nitroimidazole resistance to susceptible strains of Bacteroides. The encoded polypeptides have deduced molecular masses of 20.1 and 18.6 kDa, respectively, and share about 73% identity and 85% similarity. A new insertion sequence (IS) element named IS1168 lies 14 bases upstream of the nimA gene. The complete sequence of IS1168 was determined. A similar IS exists 12 bp upstream of the nimB gene. About 60% of the BF8 IS element was also sequenced and shown to be almost identical to IS1168.
Full text
PDFSelected References
These references are in PubMed. This may not be the complete list of references from this article.
- Boyer H. W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol. 1969 May 14;41(3):459–472. doi: 10.1016/0022-2836(69)90288-5. [DOI] [PubMed] [Google Scholar]
- Breuil J., Dublanchet A., Truffaut N., Sebald M. Transferable 5-nitroimidazole resistance in the Bacteroides fragilis group. Plasmid. 1989 Mar;21(2):151–154. doi: 10.1016/0147-619x(89)90060-7. [DOI] [PubMed] [Google Scholar]
- Edwards D. I. Nitroimidazole drugs--action and resistance mechanisms. I. Mechanisms of action. J Antimicrob Chemother. 1993 Jan;31(1):9–20. doi: 10.1093/jac/31.1.9. [DOI] [PubMed] [Google Scholar]
- Edwards D. I. Nitroimidazole drugs--action and resistance mechanisms. II. Mechanisms of resistance. J Antimicrob Chemother. 1993 Feb;31(2):201–210. doi: 10.1093/jac/31.2.201. [DOI] [PubMed] [Google Scholar]
- Haggoud A., Reysset G., Sebald M. Cloning of a Bacteroides fragilis chromosomal determinant coding for 5-nitroimidazole resistance. FEMS Microbiol Lett. 1992 Aug 1;74(1):1–5. doi: 10.1016/0378-1097(92)90728-7. [DOI] [PubMed] [Google Scholar]
- Knight A. I., Ni H., Cartwright K. A., McFadden J. J. Identification and characterization of a novel insertion sequence, IS1106, downstream of the porA gene in B15 Neisseria meningitidis. Mol Microbiol. 1992 Jun;6(11):1565–1573. doi: 10.1111/j.1365-2958.1992.tb00878.x. [DOI] [PubMed] [Google Scholar]
- Kröger M., Hobom G. Structural analysis of insertion sequence IS5. Nature. 1982 May 13;297(5862):159–162. doi: 10.1038/297159a0. [DOI] [PubMed] [Google Scholar]
- Privitera G., Dublanchet A., Sebald M. Transfer of multiple antibiotic resistance between subspecies of Bacteroides fragilis. J Infect Dis. 1979 Jan;139(1):97–101. doi: 10.1093/infdis/139.1.97. [DOI] [PubMed] [Google Scholar]
- Rasmussen B. A., Kovacs E. Identification and DNA sequence of a new Bacteroides fragilis insertion sequence-like element. Plasmid. 1991 Mar;25(2):141–144. doi: 10.1016/0147-619x(91)90027-t. [DOI] [PubMed] [Google Scholar]
- Rasmussen J. L., Odelson D. A., Macrina F. L. Complete nucleotide sequence and transcription of ermF, a macrolide-lincosamide-streptogramin B resistance determinant from Bacteroides fragilis. J Bacteriol. 1986 Nov;168(2):523–533. doi: 10.1128/jb.168.2.523-533.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rasmussen J. L., Odelson D. A., Macrina F. L. Complete nucleotide sequence of insertion element IS4351 from Bacteroides fragilis. J Bacteriol. 1987 Aug;169(8):3573–3580. doi: 10.1128/jb.169.8.3573-3580.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Reysset G., Haggoud A., Sebald M. Genetics of resistance of Bacteroides species to 5-nitroimidazole. Clin Infect Dis. 1993 Jun;16 (Suppl 4):S401–S403. doi: 10.1093/clinids/16.supplement_4.s401. [DOI] [PubMed] [Google Scholar]
- Reysset G., Haggoud A., Su W. J., Sebald M. Genetic and molecular analysis of pIP417 and pIP419: Bacteroides plasmids encoding 5-nitroimidazole resistance. Plasmid. 1992 May;27(3):181–190. doi: 10.1016/0147-619x(92)90020-b. [DOI] [PubMed] [Google Scholar]
- Smith C. J. Development and use of cloning systems for Bacteroides fragilis: cloning of a plasmid-encoded clindamycin resistance determinant. J Bacteriol. 1985 Oct;164(1):294–301. doi: 10.1128/jb.164.1.294-301.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Smith C. J. Nucleotide sequence analysis of Tn4551: use of ermFS operon fusions to detect promoter activity in Bacteroides fragilis. J Bacteriol. 1987 Oct;169(10):4589–4596. doi: 10.1128/jb.169.10.4589-4596.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wehnert G. U., Abratt V. R., Woods D. R. Molecular analysis of a gene from Bacteroides fragilis involved in metronidazole resistance in Escherichia coli. Plasmid. 1992 May;27(3):242–245. doi: 10.1016/0147-619x(92)90027-8. [DOI] [PubMed] [Google Scholar]
- Weisburg W. G., Oyaizu Y., Oyaizu H., Woese C. R. Natural relationship between bacteroides and flavobacteria. J Bacteriol. 1985 Oct;164(1):230–236. doi: 10.1128/jb.164.1.230-236.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yamada T., Lee P. D., Kosuge T. Insertion sequence elements of Pseudomonas savastanoi: Nucleotide sequence and homology with Agrobacterium tumefaciens transfer DNA. Proc Natl Acad Sci U S A. 1986 Nov;83(21):8263–8267. doi: 10.1073/pnas.83.21.8263. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. doi: 10.1016/0378-1119(85)90120-9. [DOI] [PubMed] [Google Scholar]