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. 1995 Feb;69(2):1310–1314. doi: 10.1128/jvi.69.2.1310-1314.1995

The transcripts from the sequences flanking the short component of Marek's disease virus during latent infection form a unique family of 3'-coterminal RNAs.

E A McKie 1, E Ubukata 1, S Hasegawa 1, S Zhang 1, M Nonoyama 1, A Tanaka 1
PMCID: PMC188711  PMID: 7815512

Abstract

We have constructed a cDNA library using poly(A)+ RNA from the stably transformed Marek's disease virus cell line MKT-1 and isolated cDNAs specific to the short internal repeat region of the BamHI-A fragment of the viral genome. Four distinct classes of cDNA were identified through sequence analysis of the 5' and 3' termini of each clone isolated, and a representative of each class was chosen for complete sequencing. These cDNAs were mapped on the basis of the genomic nucleotide sequence of this region, and a family of 3'-coterminal overlapping transcripts consisting of several highly spliced species, was identified. PCR was used to amplify specific regions of each cDNA, which were subcloned and used to generate riboprobes. These riboprobes hybridized to a variety of transcripts in poly(A)+ RNA fractions isolated from cells either lytically or latently infected with Marek's disease virus.

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Selected References

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  1. Anderson A. S., Francesconi A., Morgan R. W. Complete nucleotide sequence of the Marek's disease virus ICP4 gene. Virology. 1992 Aug;189(2):657–667. doi: 10.1016/0042-6822(92)90589-h. [DOI] [PubMed] [Google Scholar]
  2. Bradley G., Hayashi M., Lancz G., Tanaka A., Nonoyama M. Structure of the Marek's disease virus BamHI-H gene family: genes of putative importance for tumor induction. J Virol. 1989 Jun;63(6):2534–2542. doi: 10.1128/jvi.63.6.2534-2542.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Bradley G., Lancz G., Tanaka A., Nonoyama M. Loss of Marek's disease virus tumorigenicity is associated with truncation of RNAs transcribed within BamHI-H. J Virol. 1989 Oct;63(10):4129–4135. doi: 10.1128/jvi.63.10.4129-4135.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Breathnach R., Chambon P. Organization and expression of eucaryotic split genes coding for proteins. Annu Rev Biochem. 1981;50:349–383. doi: 10.1146/annurev.bi.50.070181.002025. [DOI] [PubMed] [Google Scholar]
  5. Calnek B. W., Shek W. R., Schat K. A. Spontaneous and induced herpesvirus genome expression in Marek's disease tumor cell lines. Infect Immun. 1981 Nov;34(2):483–491. doi: 10.1128/iai.34.2.483-491.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Delecluse H. J., Hammerschmidt W. Status of Marek's disease virus in established lymphoma cell lines: herpesvirus integration is common. J Virol. 1993 Jan;67(1):82–92. doi: 10.1128/jvi.67.1.82-92.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Dynan W. S., Tjian R. Isolation of transcription factors that discriminate between different promoters recognized by RNA polymerase II. Cell. 1983 Mar;32(3):669–680. doi: 10.1016/0092-8674(83)90053-3. [DOI] [PubMed] [Google Scholar]
  8. Fukuchi K., Sudo M., Lee Y. S., Tanaka A., Nonoyama M. Structure of Marek's disease virus DNA: detailed restriction enzyme map. J Virol. 1984 Jul;51(1):102–109. doi: 10.1128/jvi.51.1.102-109.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Fukuchi K., Tanaka A., Schierman L. W., Witter R. L., Nonoyama M. The structure of Marek disease virus DNA: the presence of unique expansion in nonpathogenic viral DNA. Proc Natl Acad Sci U S A. 1985 Feb;82(3):751–754. doi: 10.1073/pnas.82.3.751. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Graves B. J., Johnson P. F., McKnight S. L. Homologous recognition of a promoter domain common to the MSV LTR and the HSV tk gene. Cell. 1986 Feb 28;44(4):565–576. doi: 10.1016/0092-8674(86)90266-7. [DOI] [PubMed] [Google Scholar]
  11. Iwata A., Ueda S., Ishihama A., Hirai K. Sequence determination of cDNA clones of transcripts from the tumor-associated region of the Marek's disease virus genome. Virology. 1992 Apr;187(2):805–808. doi: 10.1016/0042-6822(92)90483-6. [DOI] [PubMed] [Google Scholar]
  12. Kozak M. Structural features in eukaryotic mRNAs that modulate the initiation of translation. J Biol Chem. 1991 Oct 25;266(30):19867–19870. [PubMed] [Google Scholar]
  13. Lee L. F., Kieff E. D., Bachenheimer S. L., Roizman B., Spear P. G., Burmester B. R., Nazerian K. Size and composition of Marek's disease virus deoxyribonucleic acid. J Virol. 1971 Mar;7(3):289–294. doi: 10.1128/jvi.7.3.289-294.1971. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Li D. S., Pastorek J., Zelník V., Smith G. D., Ross L. J. Identification of novel transcripts complementary to the Marek's disease virus homologue of the ICP4 gene of herpes simplex virus. J Gen Virol. 1994 Jul;75(Pt 7):1713–1722. doi: 10.1099/0022-1317-75-7-1713. [DOI] [PubMed] [Google Scholar]
  15. Maotani K., Kanamori A., Ikuta K., Ueda S., Kato S., Hirai K. Amplification of a tandem direct repeat within inverted repeats of Marek's disease virus DNA during serial in vitro passage. J Virol. 1986 May;58(2):657–660. doi: 10.1128/jvi.58.2.657-660.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Mount S. M. A catalogue of splice junction sequences. Nucleic Acids Res. 1982 Jan 22;10(2):459–472. doi: 10.1093/nar/10.2.459. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Ohashi K., O'Connell P. H., Schat K. A. Characterization of Marek's disease virus BamHI-A-specific cDNA clones obtained from a Marek's disease lymphoblastoid cell line. Virology. 1994 Mar;199(2):275–283. doi: 10.1006/viro.1994.1125. [DOI] [PubMed] [Google Scholar]
  18. Ohashi K., Zhou W., O'Connell P. H., Schat K. A. Characterization of a Marek's disease virus BamHI-L-specific cDNA clone obtained from a Marek's disease lymphoblastoid cell line. J Virol. 1994 Feb;68(2):1191–1195. doi: 10.1128/jvi.68.2.1191-1195.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Peng F., Bradley G., Tanaka A., Lancz G., Nonoyama M. Isolation and characterization of cDNAs from BamHI-H gene family RNAs associated with the tumorigenicity of Marek's disease virus. J Virol. 1992 Dec;66(12):7389–7396. doi: 10.1128/jvi.66.12.7389-7396.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Rispens B. H., van Vloten H., Mastenbroek N., Maas H. J., Schat K. A. Control of Marek's disease in the Netherlands. I. Isolation of an avirulent Marek's disease virus (strain CVI 988) and its use in laboratory vaccination trials. Avian Dis. 1972 Apr;16(1):108–125. [PubMed] [Google Scholar]
  21. Schat K. A., Buckmaster A., Ross L. J. Partial transcription map of Marek's disease herpesvirus in lytically infected cells and lymphoblastoid cell lines. Int J Cancer. 1989 Jul 15;44(1):101–109. doi: 10.1002/ijc.2910440119. [DOI] [PubMed] [Google Scholar]
  22. Schiewe U., Neipel F., Schreiner D., Fleckenstein B. Structure and transcription of an immediate-early region in the human herpesvirus 6 genome. J Virol. 1994 May;68(5):2978–2985. doi: 10.1128/jvi.68.5.2978-2985.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Spivack J. G., Fraser N. W. Detection of herpes simplex virus type 1 transcripts during latent infection in mice. J Virol. 1987 Dec;61(12):3841–3847. doi: 10.1128/jvi.61.12.3841-3847.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Sugaya K., Bradley G., Nonoyama M., Tanaka A. Latent transcripts of Marek's disease virus are clustered in the short and long repeat regions. J Virol. 1990 Dec;64(12):5773–5782. doi: 10.1128/jvi.64.12.5773-5782.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Tanaka A., Silver S., Nonoyama M. Biochemical evidence of the nonintegrated status of Marek's disease virus DNA in virus-transformed lymphoblastoid cells of chicken. Virology. 1978 Jul 1;88(1):19–24. doi: 10.1016/0042-6822(78)90105-8. [DOI] [PubMed] [Google Scholar]

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