Skip to main content
Journal of Virology logoLink to Journal of Virology
. 1996 Nov;70(11):7859–7866. doi: 10.1128/jvi.70.11.7859-7866.1996

Use of transdominant mutants of the origin-binding protein (UL9) of herpes simplex virus type 1 to define functional domains.

A K Malik 1, S K Weller 1
PMCID: PMC190857  PMID: 8892908

Abstract

UL9, the origin-binding protein of herpes simplex virus type 1, contains six sequence motifs conserved in a large superfamily of RNA and DNA helicases. Single-amino-acid substitution mutations in these motifs inactivate UL9 function in vivo (R. Martinez, L. Shao, and S. K. Weller, J. Virol. 66:6735-6746, 1992). Overexpression of wild-type UL9 is inhibitory to plaque formation in a transfection assay which measures viral plaque formation by infectious herpes simplex virus type 1 DNA. Constructs containing mutations in motif I, II, or VI exhibit even stronger inhibitory effects in the same assay and thus can be considered strong transdominant inhibitors of plaque formation by the wild-type virus. The transdominant phenotype can be relieved by introducing a second mutation in the DNA-binding domain or by deleting the N-terminal 35 amino acids of the protein. The inhibitory effects of wild-type UL9 can also be partially relieved by deletion of amino acids 292 to 404. We propose that the N-terminal 35 amino acids of UL9 and residues 292 to 404 may define new functional domains of the UL9 protein.

Full Text

The Full Text of this article is available as a PDF (754.1 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Arbuckle M. I., Stow N. D. A mutational analysis of the DNA-binding domain of the herpes simplex virus type 1 UL9 protein. J Gen Virol. 1993 Jul;74(Pt 7):1349–1355. doi: 10.1099/0022-1317-74-7-1349. [DOI] [PubMed] [Google Scholar]
  2. Blümel J., Matz B. Thermosensitive UL9 gene function is required for early stages of herpes simplex virus type 1 DNA synthesis. J Gen Virol. 1995 Dec;76(Pt 12):3119–3124. doi: 10.1099/0022-1317-76-12-3119. [DOI] [PubMed] [Google Scholar]
  3. Boehmer P. E., Craigie M. C., Stow N. D., Lehman I. R. Association of origin binding protein and single strand DNA-binding protein, ICP8, during herpes simplex virus type 1 DNA replication in vivo. J Biol Chem. 1994 Nov 18;269(46):29329–29334. [PubMed] [Google Scholar]
  4. Boehmer P. E., Lehman I. R. Physical interaction between the herpes simplex virus 1 origin-binding protein and single-stranded DNA-binding protein ICP8. Proc Natl Acad Sci U S A. 1993 Sep 15;90(18):8444–8448. doi: 10.1073/pnas.90.18.8444. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Bruckner R. C., Crute J. J., Dodson M. S., Lehman I. R. The herpes simplex virus 1 origin binding protein: a DNA helicase. J Biol Chem. 1991 Feb 5;266(4):2669–2674. [PubMed] [Google Scholar]
  6. Dabrowski C. E., Carmillo P. J., Schaffer P. A. Cellular protein interactions with herpes simplex virus type 1 oriS. Mol Cell Biol. 1994 Apr;14(4):2545–2555. doi: 10.1128/mcb.14.4.2545. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Dabrowski C. E., Schaffer P. A. Herpes simplex virus type 1 origin-specific binding protein: oriS-binding properties and effects of cellular proteins. J Virol. 1991 Jun;65(6):3140–3150. doi: 10.1128/jvi.65.6.3140-3150.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Deb S., Deb S. P. A 269-amino-acid segment with a pseudo-leucine zipper and a helix-turn-helix motif codes for the sequence-specific DNA-binding domain of herpes simplex virus type 1 origin-binding protein. J Virol. 1991 Jun;65(6):2829–2838. doi: 10.1128/jvi.65.6.2829-2838.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Elias P., Gustafsson C. M., Hammarsten O., Stow N. D. Structural elements required for the cooperative binding of the herpes simplex virus origin binding protein to oriS reside in the N-terminal part of the protein. J Biol Chem. 1992 Aug 25;267(24):17424–17429. [PubMed] [Google Scholar]
  10. Elias P., Gustafsson C. M., Hammarsten O. The origin binding protein of herpes simplex virus 1 binds cooperatively to the viral origin of replication oris. J Biol Chem. 1990 Oct 5;265(28):17167–17173. [PubMed] [Google Scholar]
  11. Fanning E., Knippers R. Structure and function of simian virus 40 large tumor antigen. Annu Rev Biochem. 1992;61:55–85. doi: 10.1146/annurev.bi.61.070192.000415. [DOI] [PubMed] [Google Scholar]
  12. Fierer D. S., Challberg M. D. Purification and characterization of UL9, the herpes simplex virus type 1 origin-binding protein. J Virol. 1992 Jul;66(7):3986–3995. doi: 10.1128/jvi.66.7.3986-3995.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Fierer D. S., Challberg M. D. The stoichiometry of binding of the herpes simplex virus type 1 origin binding protein, UL9, to OriS. J Biol Chem. 1995 Mar 31;270(13):7330–7334. doi: 10.1074/jbc.270.13.7330. [DOI] [PubMed] [Google Scholar]
  14. Friedman A. D., Triezenberg S. J., McKnight S. L. Expression of a truncated viral trans-activator selectively impedes lytic infection by its cognate virus. Nature. 1988 Sep 29;335(6189):452–454. doi: 10.1038/335452a0. [DOI] [PubMed] [Google Scholar]
  15. Gorbalenya A. E., Koonin E. V., Donchenko A. P., Blinov V. M. A novel superfamily of nucleoside triphosphate-binding motif containing proteins which are probably involved in duplex unwinding in DNA and RNA replication and recombination. FEBS Lett. 1988 Aug 1;235(1-2):16–24. doi: 10.1016/0014-5793(88)81226-2. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Gorbalenya A. E., Koonin E. V., Donchenko A. P., Blinov V. M. Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes. Nucleic Acids Res. 1989 Jun 26;17(12):4713–4730. doi: 10.1093/nar/17.12.4713. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Hazuda D. J., Perry H. C., McClements W. L. Cooperative interactions between replication origin-bound molecules of herpes simplex virus origin-binding protein are mediated via the amino terminus of the protein. J Biol Chem. 1992 Jul 15;267(20):14309–14315. [PubMed] [Google Scholar]
  18. Herskowitz I. Functional inactivation of genes by dominant negative mutations. Nature. 1987 Sep 17;329(6136):219–222. doi: 10.1038/329219a0. [DOI] [PubMed] [Google Scholar]
  19. Hodgman T. C. A new superfamily of replicative proteins. Nature. 1988 May 5;333(6168):22–23. doi: 10.1038/333022b0. [DOI] [PubMed] [Google Scholar]
  20. Kouzarides T., Ziff E. The role of the leucine zipper in the fos-jun interaction. Nature. 1988 Dec 15;336(6200):646–651. doi: 10.1038/336646a0. [DOI] [PubMed] [Google Scholar]
  21. Kunkel T. A. Rapid and efficient site-specific mutagenesis without phenotypic selection. Proc Natl Acad Sci U S A. 1985 Jan;82(2):488–492. doi: 10.1073/pnas.82.2.488. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Landschulz W. H., Johnson P. F., McKnight S. L. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science. 1988 Jun 24;240(4860):1759–1764. doi: 10.1126/science.3289117. [DOI] [PubMed] [Google Scholar]
  23. Lanford R. E., Butel J. S. Construction and characterization of an SV40 mutant defective in nuclear transport of T antigen. Cell. 1984 Jul;37(3):801–813. doi: 10.1016/0092-8674(84)90415-x. [DOI] [PubMed] [Google Scholar]
  24. Lanford R. E., Butel J. S. Inhibition of nuclear migration of wild-type SV40 tumor antigen by a transport-defective mutant of SV40-adenovirus 7 hybrid virus. Virology. 1980 Sep;105(2):303–313. doi: 10.1016/0042-6822(80)90032-x. [DOI] [PubMed] [Google Scholar]
  25. Lee S. S., Dong Q., Wang T. S., Lehman I. R. Interaction of herpes simplex virus 1 origin-binding protein with DNA polymerase alpha. Proc Natl Acad Sci U S A. 1995 Aug 15;92(17):7882–7886. doi: 10.1073/pnas.92.17.7882. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. MacArthur M. W., Thornton J. M. Influence of proline residues on protein conformation. J Mol Biol. 1991 Mar 20;218(2):397–412. doi: 10.1016/0022-2836(91)90721-h. [DOI] [PubMed] [Google Scholar]
  27. Makhov A. M., Boehmer P. E., Lehman I. R., Griffith J. D. The herpes simplex virus type 1 origin-binding protein carries out origin specific DNA unwinding and forms stem-loop structures. EMBO J. 1996 Apr 1;15(7):1742–1750. [PMC free article] [PubMed] [Google Scholar]
  28. Malik A. K., Martinez R., Muncy L., Carmichael E. P., Weller S. K. Genetic analysis of the herpes simplex virus type 1 UL9 gene: isolation of a LacZ insertion mutant and expression in eukaryotic cells. Virology. 1992 Oct;190(2):702–715. doi: 10.1016/0042-6822(92)90908-8. [DOI] [PubMed] [Google Scholar]
  29. Martinez R., Shao L., Weller S. K. The conserved helicase motifs of the herpes simplex virus type 1 origin-binding protein UL9 are important for function. J Virol. 1992 Nov;66(11):6735–6746. doi: 10.1128/jvi.66.11.6735-6746.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. McGeoch D. J., Dalrymple M. A., Dolan A., McNab D., Perry L. J., Taylor P., Challberg M. D. Structures of herpes simplex virus type 1 genes required for replication of virus DNA. J Virol. 1988 Feb;62(2):444–453. doi: 10.1128/jvi.62.2.444-453.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. McLean G. W., Abbotts A. P., Parry M. E., Marsden H. S., Stow N. D. The herpes simplex virus type 1 origin-binding protein interacts specifically with the viral UL8 protein. J Gen Virol. 1994 Oct;75(Pt 10):2699–2706. doi: 10.1099/0022-1317-75-10-2699. [DOI] [PubMed] [Google Scholar]
  32. Mocarski E. S., Roizman B. Herpesvirus-dependent amplification and inversion of cell-associated viral thymidine kinase gene flanked by viral a sequences and linked to an origin of viral DNA replication. Proc Natl Acad Sci U S A. 1982 Sep;79(18):5626–5630. doi: 10.1073/pnas.79.18.5626. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Olivo P. D., Nelson N. J., Challberg M. D. Herpes simplex virus DNA replication: the UL9 gene encodes an origin-binding protein. Proc Natl Acad Sci U S A. 1988 Aug;85(15):5414–5418. doi: 10.1073/pnas.85.15.5414. [DOI] [PMC free article] [PubMed] [Google Scholar]
  34. Olivo P. D., Nelson N. J., Challberg M. D. Herpes simplex virus type 1 gene products required for DNA replication: identification and overexpression. J Virol. 1989 Jan;63(1):196–204. doi: 10.1128/jvi.63.1.196-204.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  35. Pause A., Sonenberg N. Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A. EMBO J. 1992 Jul;11(7):2643–2654. doi: 10.1002/j.1460-2075.1992.tb05330.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  36. Perry H. C., Hazuda D. J., McClements W. L. The DNA binding domain of herpes simplex virus type 1 origin binding protein is a transdominant inhibitor of virus replication. Virology. 1993 Mar;193(1):73–79. doi: 10.1006/viro.1993.1104. [DOI] [PubMed] [Google Scholar]
  37. Shepard A. A., Tolentino P., DeLuca N. A. trans-dominant inhibition of herpes simplex virus transcriptional regulatory protein ICP4 by heterodimer formation. J Virol. 1990 Aug;64(8):3916–3926. doi: 10.1128/jvi.64.8.3916-3926.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  38. Skaliter R., Lehman I. R. Rolling circle DNA replication in vitro by a complex of herpes simplex virus type 1-encoded enzymes. Proc Natl Acad Sci U S A. 1994 Oct 25;91(22):10665–10669. doi: 10.1073/pnas.91.22.10665. [DOI] [PMC free article] [PubMed] [Google Scholar]
  39. Stabell E. C., Olivo P. D. A truncated herpes simplex virus origin binding protein which contains the carboxyl terminal origin binding domain binds to the origin of replication but does not alter its conformation. Nucleic Acids Res. 1993 Nov 11;21(22):5203–5211. doi: 10.1093/nar/21.22.5203. [DOI] [PMC free article] [PubMed] [Google Scholar]
  40. Stow N. D., Hammarsten O., Arbuckle M. I., Elias P. Inhibition of herpes simplex virus type 1 DNA replication by mutant forms of the origin-binding protein. Virology. 1993 Oct;196(2):413–418. doi: 10.1006/viro.1993.1496. [DOI] [PubMed] [Google Scholar]
  41. Stow N. D. Herpes simplex virus type 1 origin-dependent DNA replication in insect cells using recombinant baculoviruses. J Gen Virol. 1992 Feb;73(Pt 2):313–321. doi: 10.1099/0022-1317-73-2-313. [DOI] [PubMed] [Google Scholar]
  42. Stow N. D. Localization of an origin of DNA replication within the TRS/IRS repeated region of the herpes simplex virus type 1 genome. EMBO J. 1982;1(7):863–867. doi: 10.1002/j.1460-2075.1982.tb01261.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  43. Stow N. D., McMonagle E. C. Characterization of the TRS/IRS origin of DNA replication of herpes simplex virus type 1. Virology. 1983 Oct 30;130(2):427–438. doi: 10.1016/0042-6822(83)90097-1. [DOI] [PubMed] [Google Scholar]
  44. Walker J. E., Saraste M., Runswick M. J., Gay N. J. Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J. 1982;1(8):945–951. doi: 10.1002/j.1460-2075.1982.tb01276.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  45. Weber P. C., Wigdahl B. Identification of dominant-negative mutants of the herpes simplex virus type 1 immediate-early protein ICP0. J Virol. 1992 Apr;66(4):2261–2267. doi: 10.1128/jvi.66.4.2261-2267.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  46. Weller S. K., Lee K. J., Sabourin D. J., Schaffer P. A. Genetic analysis of temperature-sensitive mutants which define the gene for the major herpes simplex virus type 1 DNA-binding protein. J Virol. 1983 Jan;45(1):354–366. doi: 10.1128/jvi.45.1.354-366.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  47. Weller S. K., Spadaro A., Schaffer J. E., Murray A. W., Maxam A. M., Schaffer P. A. Cloning, sequencing, and functional analysis of oriL, a herpes simplex virus type 1 origin of DNA synthesis. Mol Cell Biol. 1985 May;5(5):930–942. doi: 10.1128/mcb.5.5.930. [DOI] [PMC free article] [PubMed] [Google Scholar]
  48. Zhu L., Weller S. K. UL5, a protein required for HSV DNA synthesis: genetic analysis, overexpression in Escherichia coli, and generation of polyclonal antibodies. Virology. 1988 Oct;166(2):366–378. doi: 10.1016/0042-6822(88)90507-7. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Virology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES