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American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1996 Sep;59(3):676–683.

Genetic variability in the tumor necrosis factor-lymphotoxin region influences susceptibility to rheumatoid arthritis.

B Mulcahy 1, F Waldron-Lynch 1, M F McDermott 1, C Adams 1, C I Amos 1, D K Zhu 1, R H Ward 1, D O Clegg 1, F Shanahan 1, M G Molloy 1, F O'Gara 1
PMCID: PMC1914921  PMID: 8751869

Abstract

The major histocompatibility complex class III tumor necrosis factor-lymphotoxin (TNF-LT) region (6p21.3) was investigated as a possible susceptibility locus for rheumatoid arthritis (RA). Inheritance of five TNF microsatellite markers was determined in 50 multiplex families. Overall, 47 different haplotypes were observed. One of these, the TNF a6, b5, c1, d3, e3 (H1) haplotype, was present in 35.3% of affected, but in only 20.5% of unaffected, individuals (P < .005). This haplotype accounted for 21.5% of the parental haplotypes transmitted to affected offspring and only 7.3% not transmitted to affected offspring (P = .0003). The TNF a6 and TNF c1 alleles were individually associated with RA (P = .0005 and .0008, respectively), as were the HLA-DRB1 "shared epitope" (SE) (P = .0001) and HLA-DRB1*0401 (P = .0018). Both univariate and bivariate conditional logistic regression analysis showed significant effects of TNF c1 and SE in increasing risk to RA (P < .001). Stratification by the presence of SE indicated an independent effect of the TNFc1 allele (P = .0003) and the HLA A1, B8, DR3 extended haplotype (always TNFa2, b3, c1, d1, e3) (P = .0027) in SE heterozygotes, while the H1 haplotype was associated with RA in SE homozygotes (P = .0018). The TNF-LT region appears to influence susceptibility to RA, distinct from HLA-DR.

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Selected References

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  1. Albani S., Keystone E. C., Nelson J. L., Ollier W. E., La Cava A., Montemayor A. C., Weber D. A., Montecucco C., Martini A., Carson D. A. Positive selection in autoimmunity: abnormal immune responses to a bacterial dnaJ antigenic determinant in patients with early rheumatoid arthritis. Nat Med. 1995 May;1(5):448–452. doi: 10.1038/nm0595-448. [DOI] [PubMed] [Google Scholar]
  2. Bennett S. T., Lucassen A. M., Gough S. C., Powell E. E., Undlien D. E., Pritchard L. E., Merriman M. E., Kawaguchi Y., Dronsfield M. J., Pociot F. Susceptibility to human type 1 diabetes at IDDM2 is determined by tandem repeat variation at the insulin gene minisatellite locus. Nat Genet. 1995 Mar;9(3):284–292. doi: 10.1038/ng0395-284. [DOI] [PubMed] [Google Scholar]
  3. Boki K. A., Panayi G. S., Vaughan R. W., Drosos A. A., Moutsopoulos H. M., Lanchbury J. S. HLA class II sequence polymorphisms and susceptibility to rheumatoid arthritis in Greeks. The HLA-DR beta shared-epitope hypothesis accounts for the disease in only a minority of Greek patients. Arthritis Rheum. 1992 Jul;35(7):749–755. doi: 10.1002/art.1780350706. [DOI] [PubMed] [Google Scholar]
  4. Brennan F. M., Maini R. N., Feldmann M. TNF alpha--a pivotal role in rheumatoid arthritis? Br J Rheumatol. 1992 May;31(5):293–298. doi: 10.1093/rheumatology/31.5.293. [DOI] [PubMed] [Google Scholar]
  5. Dizier M. H., Eliaou J. F., Babron M. C., Combe B., Sany J., Clot J., Clerget-Darpoux F. Investigation of the HLA component involved in rheumatoid arthritis (RA) by using the marker association-segregation chi-square (MASC) method: rejection of the unifying-shared-epitope hypothesis. Am J Hum Genet. 1993 Sep;53(3):715–721. [PMC free article] [PubMed] [Google Scholar]
  6. Elliott M. J., Maini R. N., Feldmann M., Long-Fox A., Charles P., Katsikis P., Brennan F. M., Walker J., Bijl H., Ghrayeb J. Treatment of rheumatoid arthritis with chimeric monoclonal antibodies to tumor necrosis factor alpha. Arthritis Rheum. 1993 Dec;36(12):1681–1690. doi: 10.1002/art.1780361206. [DOI] [PubMed] [Google Scholar]
  7. Elliott M. J., Maini R. N., Feldmann M., Long-Fox A., Charles P., Katsikis P., Brennan F. M., Walker J., Bijl H., Ghrayeb J. Treatment of rheumatoid arthritis with chimeric monoclonal antibodies to tumor necrosis factor alpha. Arthritis Rheum. 1993 Dec;36(12):1681–1690. doi: 10.1002/art.1780361206. [DOI] [PubMed] [Google Scholar]
  8. Festenstein H., Awad J., Hitman G. A., Cutbush S., Groves A. V., Cassell P., Ollier W., Sachs J. A. New HLA DNA polymorphisms associated with autoimmune diseases. Nature. 1986 Jul 3;322(6074):64–67. doi: 10.1038/322064a0. [DOI] [PubMed] [Google Scholar]
  9. Grau G. E., Fajardo L. F., Piguet P. F., Allet B., Lambert P. H., Vassalli P. Tumor necrosis factor (cachectin) as an essential mediator in murine cerebral malaria. Science. 1987 Sep 4;237(4819):1210–1212. doi: 10.1126/science.3306918. [DOI] [PubMed] [Google Scholar]
  10. Gregersen P. K., Silver J., Winchester R. J. The shared epitope hypothesis. An approach to understanding the molecular genetics of susceptibility to rheumatoid arthritis. Arthritis Rheum. 1987 Nov;30(11):1205–1213. doi: 10.1002/art.1780301102. [DOI] [PubMed] [Google Scholar]
  11. Griffiths R. J., Pettipher E. R., Koch K., Farrell C. A., Breslow R., Conklyn M. J., Smith M. A., Hackman B. C., Wimberly D. J., Milici A. J. Leukotriene B4 plays a critical role in the progression of collagen-induced arthritis. Proc Natl Acad Sci U S A. 1995 Jan 17;92(2):517–521. doi: 10.1073/pnas.92.2.517. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Harris E. D., Jr Rheumatoid arthritis. Pathophysiology and implications for therapy. N Engl J Med. 1990 May 3;322(18):1277–1289. doi: 10.1056/NEJM199005033221805. [DOI] [PubMed] [Google Scholar]
  13. Hasstedt S. J., Clegg D. O., Ingles L., Ward R. H. HLA-linked rheumatoid arthritis. Am J Hum Genet. 1994 Oct;55(4):738–746. [PMC free article] [PubMed] [Google Scholar]
  14. Jacob C. O., Fronek Z., Lewis G. D., Koo M., Hansen J. A., McDevitt H. O. Heritable major histocompatibility complex class II-associated differences in production of tumor necrosis factor alpha: relevance to genetic predisposition to systemic lupus erythematosus. Proc Natl Acad Sci U S A. 1990 Feb;87(3):1233–1237. doi: 10.1073/pnas.87.3.1233. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Jacob C. O., McDevitt H. O. Tumour necrosis factor-alpha in murine autoimmune 'lupus' nephritis. Nature. 1988 Jan 28;331(6154):356–358. doi: 10.1038/331356a0. [DOI] [PubMed] [Google Scholar]
  16. Jawaheer D., Ollier W. E., Thomson W. Multiplex ARMS-RFLP: a simple and rapid method for HLA-DR4 subtyping. Eur J Immunogenet. 1993 Jun;20(3):175–187. doi: 10.1111/j.1744-313x.1993.tb00108.x. [DOI] [PubMed] [Google Scholar]
  17. Keffer J., Probert L., Cazlaris H., Georgopoulos S., Kaslaris E., Kioussis D., Kollias G. Transgenic mice expressing human tumour necrosis factor: a predictive genetic model of arthritis. EMBO J. 1991 Dec;10(13):4025–4031. doi: 10.1002/j.1460-2075.1991.tb04978.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Kendall E., Sargent C. A., Campbell R. D. Human major histocompatibility complex contains a new cluster of genes between the HLA-D and complement C4 loci. Nucleic Acids Res. 1990 Dec 25;18(24):7251–7257. doi: 10.1093/nar/18.24.7251. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Kennedy G. C., German M. S., Rutter W. J. The minisatellite in the diabetes susceptibility locus IDDM2 regulates insulin transcription. Nat Genet. 1995 Mar;9(3):293–298. doi: 10.1038/ng0395-293. [DOI] [PubMed] [Google Scholar]
  20. Lucassen A. M., Screaton G. R., Julier C., Elliott T. J., Lathrop M., Bell J. I. Regulation of insulin gene expression by the IDDM associated, insulin locus haplotype. Hum Mol Genet. 1995 Apr;4(4):501–506. doi: 10.1093/hmg/4.4.501. [DOI] [PubMed] [Google Scholar]
  21. McDermott M., Kastner D. L., Holloman J. D., Schmidt-Wolf G., Lundberg A. S., Sinha A. A., Hsu C., Cashin P., Molloy M. G., Mulcahy B. The role of T cell receptor beta chain genes in susceptibility to rheumatoid arthritis. Arthritis Rheum. 1995 Jan;38(1):91–95. doi: 10.1002/art.1780380114. [DOI] [PubMed] [Google Scholar]
  22. McDermott M., Molloy M., Cashin P., McMahon M., Spencer S., Jennings S., Sneyd A., Greally J., Silman A., Ollier W. A multicase family study of rheumatoid arthritis in south west Ireland. Dis Markers. 1986 Jun;4(1-2):103–111. [PubMed] [Google Scholar]
  23. McGuire W., Hill A. V., Allsopp C. E., Greenwood B. M., Kwiatkowski D. Variation in the TNF-alpha promoter region associated with susceptibility to cerebral malaria. Nature. 1994 Oct 6;371(6497):508–510. doi: 10.1038/371508a0. [DOI] [PubMed] [Google Scholar]
  24. Moxley G. Variable-constant segment genotype of immunoglobulin kappa is associated with increased risk for rheumatoid arthritis. Arthritis Rheum. 1992 Jan;35(1):19–25. doi: 10.1002/art.1780350104. [DOI] [PubMed] [Google Scholar]
  25. Plater-Zyberk C., Bonnefoy J. Y. Marked amelioration of established collagen-induced arthritis by treatment with antibodies to CD23 in vivo. Nat Med. 1995 Aug;1(8):781–785. doi: 10.1038/nm0895-781. [DOI] [PubMed] [Google Scholar]
  26. Plevy S. E., Targan S. R., Yang H., Fernandez D., Rotter J. I., Toyoda H. Tumor necrosis factor microsatellites define a Crohn's disease-associated haplotype on chromosome 6. Gastroenterology. 1996 Apr;110(4):1053–1060. doi: 10.1053/gast.1996.v110.pm8612993. [DOI] [PubMed] [Google Scholar]
  27. Pociot F., Briant L., Jongeneel C. V., Mölvig J., Worsaae H., Abbal M., Thomsen M., Nerup J., Cambon-Thomsen A. Association of tumor necrosis factor (TNF) and class II major histocompatibility complex alleles with the secretion of TNF-alpha and TNF-beta by human mononuclear cells: a possible link to insulin-dependent diabetes mellitus. Eur J Immunol. 1993 Jan;23(1):224–231. doi: 10.1002/eji.1830230135. [DOI] [PubMed] [Google Scholar]
  28. Pujol-Borrell R., Todd I., Doshi M., Bottazzo G. F., Sutton R., Gray D., Adolf G. R., Feldmann M. HLA class II induction in human islet cells by interferon-gamma plus tumour necrosis factor or lymphotoxin. Nature. 1987 Mar 19;326(6110):304–306. doi: 10.1038/326304a0. [DOI] [PubMed] [Google Scholar]
  29. Raine C. S. Multiple sclerosis: TNF revisited, with promise. Nat Med. 1995 Mar;1(3):211–214. doi: 10.1038/nm0395-211. [DOI] [PubMed] [Google Scholar]
  30. Rigby A. S., Silman A. J., Voelm L., Gregory J. C., Ollier W. E., Khan M. A., Nepom G. T., Thomson G. Investigating the HLA component in rheumatoid arthritis: an additive (dominant) mode of inheritance is rejected, a recessive mode is preferred. Genet Epidemiol. 1991;8(3):153–175. doi: 10.1002/gepi.1370080303. [DOI] [PubMed] [Google Scholar]
  31. Sakkas L. I., Demaine A. G., Vaughan R. W., Welsh K. I., Panayi G. S. The association of DNA variants at or near the IgH locus with rheumatoid arthritis. J Immunogenet. 1987 Aug-Oct;14(4-5):189–196. doi: 10.1111/j.1744-313x.1987.tb00380.x. [DOI] [PubMed] [Google Scholar]
  32. Saklatvala J. Tumour necrosis factor alpha stimulates resorption and inhibits synthesis of proteoglycan in cartilage. Nature. 1986 Aug 7;322(6079):547–549. doi: 10.1038/322547a0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Santamaria P., Gehrz R. C., Bryan M. K., Barbosa J. J. Involvement of class II MHC molecules in the LPS-induction of IL-1/TNF secretions by human monocytes. Quantitative differences at the polymorphic level. J Immunol. 1989 Aug 1;143(3):913–922. [PubMed] [Google Scholar]
  34. Selmaj K., Raine C. S., Farooq M., Norton W. T., Brosnan C. F. Cytokine cytotoxicity against oligodendrocytes. Apoptosis induced by lymphotoxin. J Immunol. 1991 Sep 1;147(5):1522–1529. [PubMed] [Google Scholar]
  35. Spielman R. S., McGinnis R. E., Ewens W. J. Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM). Am J Hum Genet. 1993 Mar;52(3):506–516. [PMC free article] [PubMed] [Google Scholar]
  36. Spies T., Morton C. C., Nedospasov S. A., Fiers W., Pious D., Strominger J. L. Genes for the tumor necrosis factors alpha and beta are linked to the human major histocompatibility complex. Proc Natl Acad Sci U S A. 1986 Nov;83(22):8699–8702. doi: 10.1073/pnas.83.22.8699. [DOI] [PMC free article] [PubMed] [Google Scholar]
  37. Stastny P. Association of the B-cell alloantigen DRw4 with rheumatoid arthritis. N Engl J Med. 1978 Apr 20;298(16):869–871. doi: 10.1056/NEJM197804202981602. [DOI] [PubMed] [Google Scholar]
  38. TERASAKI P. I., MCCLELLAND J. D. MICRODROPLET ASSAY OF HUMAN SERUM CYTOTOXINS. Nature. 1964 Dec 5;204:998–1000. doi: 10.1038/204998b0. [DOI] [PubMed] [Google Scholar]
  39. Thomsen M., Mølvig J., Zerbib A., de Preval C., Abbal M., Dugoujon J. M., Ohayon E., Svejgaard A., Cambon-Thomsen A., Nerup J. The susceptibility to insulin-dependent diabetes mellitus is associated with C4 allotypes independently of the association with HLA-DQ alleles in HLA-DR3,4 heterozygotes. Immunogenetics. 1988;28(5):320–327. doi: 10.1007/BF00364230. [DOI] [PubMed] [Google Scholar]
  40. Udalova I. A., Nedospasov S. A., Webb G. C., Chaplin D. D., Turetskaya R. L. Highly informative typing of the human TNF locus using six adjacent polymorphic markers. Genomics. 1993 Apr;16(1):180–186. doi: 10.1006/geno.1993.1156. [DOI] [PubMed] [Google Scholar]
  41. Webb G. C., Chaplin D. D. Genetic variability at the human tumor necrosis factor loci. J Immunol. 1990 Aug 15;145(4):1278–1285. [PubMed] [Google Scholar]
  42. Weyand C. M., Hicok K. C., Conn D. L., Goronzy J. J. The influence of HLA-DRB1 genes on disease severity in rheumatoid arthritis. Ann Intern Med. 1992 Nov 15;117(10):801–806. doi: 10.7326/0003-4819-117-10-801. [DOI] [PubMed] [Google Scholar]
  43. Winchester R., Dwyer E., Rose S. The genetic basis of rheumatoid arthritis. The shared epitope hypothesis. Rheum Dis Clin North Am. 1992 Nov;18(4):761–783. [PubMed] [Google Scholar]
  44. Worthington J., Ollier W. E., Leach M. K., Smith I., Hay E. M., Thomson W., Pepper L., Carthy D., Farhan A., Martin S. The Arthritis and Rheumatism Council's National Repository of Family Material: pedigrees from the first 100 rheumatoid arthritis families containing affected sibling pairs. Br J Rheumatol. 1994 Oct;33(10):970–976. doi: 10.1093/rheumatology/33.10.970. [DOI] [PubMed] [Google Scholar]
  45. Zheng L., Fisher G., Miller R. E., Peschon J., Lynch D. H., Lenardo M. J. Induction of apoptosis in mature T cells by tumour necrosis factor. Nature. 1995 Sep 28;377(6547):348–351. doi: 10.1038/377348a0. [DOI] [PubMed] [Google Scholar]

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