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. 1993 Dec;59(12):4017–4023. doi: 10.1128/aem.59.12.4017-4023.1993

Ubiquity of lignin-degrading peroxidases among various wood-degrading fungi.

A B Orth 1, D J Royse 1, M Tien 1
PMCID: PMC195861  PMID: 8285705

Abstract

Phanerochaete chrysosporium is rapidly becoming a model system for the study of lignin biodegradation. Numerous studies on the physiology, biochemistry, chemistry, and genetics of this system have been performed. However, P. chrysosporium is not the only fungus to have a lignin-degrading enzyme system. Many other ligninolytic species of fungi, as well as other distantly related organisms which are known to produce lignin peroxidases, are described in this paper. In this study, we demonstrated the presence of the peroxidative enzymes in nine species not previously investigated. The fungi studied produced significant manganese peroxidase activity when they were grown on an oak sawdust substrate supplemented with wheat bran, millet, and sucrose. Many of the fungi also exhibited laccase and/or glyoxal oxidase activity. Inhibitors present in the medium prevented measurement of lignin peroxidase activity. However, Western blots (immunoblots) revealed that several of the fungi produced lignin peroxidase proteins. We concluded from this work that lignin-degrading peroxidases are present in nearly all ligninolytic fungi, but may be expressed differentially in different species. Substantial variability exists in the levels and types of ligninolytic enzymes produced by different white not fungi.

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  1. Addleman K., Archibald F. Kraft Pulp Bleaching and Delignification by Dikaryons and Monokaryons of Trametes versicolor. Appl Environ Microbiol. 1993 Jan;59(1):266–273. doi: 10.1128/aem.59.1.266-273.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Archibald F. S. Lignin Peroxidase Activity Is Not Important in Biological Bleaching and Delignification of Unbleached Kraft Pulp by Trametes versicolor. Appl Environ Microbiol. 1992 Sep;58(9):3101–3109. doi: 10.1128/aem.58.9.3101-3109.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Black A. K., Reddy C. A. Cloning and characterization of a lignin peroxidase gene from the white-rot fungus Trametes versicolor. Biochem Biophys Res Commun. 1991 Aug 30;179(1):428–435. doi: 10.1016/0006-291x(91)91388-s. [DOI] [PubMed] [Google Scholar]
  4. Blanchette R. A., Abad A. R., Farrell R. L., Leathers T. D. Detection of lignin peroxidase and xylanase by immunocytochemical labeling in wood decayed by basidiomycetes. Appl Environ Microbiol. 1989 Jun;55(6):1457–1465. doi: 10.1128/aem.55.6.1457-1465.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Bollag J. M., Leonowicz A. Comparative studies of extracellular fungal laccases. Appl Environ Microbiol. 1984 Oct;48(4):849–854. doi: 10.1128/aem.48.4.849-854.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Bumpus J. A., Tien M., Wright D., Aust S. D. Oxidation of persistent environmental pollutants by a white rot fungus. Science. 1985 Jun 21;228(4706):1434–1436. doi: 10.1126/science.3925550. [DOI] [PubMed] [Google Scholar]
  7. Datta A., Bettermann A., Kirk T. K. Identification of a specific manganese peroxidase among ligninolytic enzymes secreted by Phanerochaete chrysosporium during wood decay. Appl Environ Microbiol. 1991 May;57(5):1453–1460. doi: 10.1128/aem.57.5.1453-1460.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Faison B. D., Kirk T. K. Relationship Between Lignin Degradation and Production of Reduced Oxygen Species by Phanerochaete chrysosporium. Appl Environ Microbiol. 1983 Nov;46(5):1140–1145. doi: 10.1128/aem.46.5.1140-1145.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Forney L. J., Reddy C. A., Tien M., Aust S. D. The involvement of hydroxyl radical derived from hydrogen peroxide in lignin degradation by the white rot fungus Phanerochaete chrysosporium. J Biol Chem. 1982 Oct 10;257(19):11455–11462. [PubMed] [Google Scholar]
  10. Forrester I. T., Grabski A. C., Mishra C., Kelley B. D., Strickland W. N., Leatham G. F., Burgess R. R. Characteristics and N-terminal amino acid sequence of a manganese peroxidase purified from Lentinula edodes cultures grown on a commercial wood substrate. Appl Microbiol Biotechnol. 1990 Jun;33(3):359–365. doi: 10.1007/BF00164536. [DOI] [PubMed] [Google Scholar]
  11. Glenn J. K., Gold M. H. Purification and characterization of an extracellular Mn(II)-dependent peroxidase from the lignin-degrading basidiomycete, Phanerochaete chrysosporium. Arch Biochem Biophys. 1985 Nov 1;242(2):329–341. doi: 10.1016/0003-9861(85)90217-6. [DOI] [PubMed] [Google Scholar]
  12. Glenn J. K., Morgan M. A., Mayfield M. B., Kuwahara M., Gold M. H. An extracellular H2O2-requiring enzyme preparation involved in lignin biodegradation by the white rot basidiomycete Phanerochaete chrysosporium. Biochem Biophys Res Commun. 1983 Aug 12;114(3):1077–1083. doi: 10.1016/0006-291x(83)90672-1. [DOI] [PubMed] [Google Scholar]
  13. Hammel K. E., Jensen K. A., Jr, Mozuch M. D., Landucci L. L., Tien M., Pease E. A. Ligninolysis by a purified lignin peroxidase. J Biol Chem. 1993 Jun 15;268(17):12274–12281. [PubMed] [Google Scholar]
  14. Huoponen K., Ollikka P., Kälin M., Walther I., Mäntsälä P., Reiser J. Characterization of lignin peroxidase-encoding genes from lignin-degrading basidiomycetes. Gene. 1990 Apr 30;89(1):145–150. doi: 10.1016/0378-1119(90)90218-g. [DOI] [PubMed] [Google Scholar]
  15. Johansson T., Welinder K. G., Nyman P. O. Isozymes of lignin peroxidase and manganese(II) peroxidase from the white-rot basidiomycete Trametes versicolor. II. Partial sequences, peptide maps, and amino acid and carbohydrate compositions. Arch Biochem Biophys. 1993 Jan;300(1):57–62. doi: 10.1006/abbi.1993.1008. [DOI] [PubMed] [Google Scholar]
  16. Jönsson L., Nyman P. O. Characterization of a lignin peroxidase gene from the white-rot fungus Trametes versicolor. Biochimie. 1992 Feb;74(2):177–182. doi: 10.1016/0300-9084(92)90043-e. [DOI] [PubMed] [Google Scholar]
  17. Karhunen E., Kantelinen A., Niku-Paavola M. L. Mn-dependent peroxidase from the lignin-degrading white rot fungus Phlebia radiata. Arch Biochem Biophys. 1990 May 15;279(1):25–31. doi: 10.1016/0003-9861(90)90458-b. [DOI] [PubMed] [Google Scholar]
  18. Kersten P. J., Kirk T. K. Involvement of a new enzyme, glyoxal oxidase, in extracellular H2O2 production by Phanerochaete chrysosporium. J Bacteriol. 1987 May;169(5):2195–2201. doi: 10.1128/jb.169.5.2195-2201.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Kimura Y., Asada Y., Oka T., Kuwahara M. Molecular analysis of a Bjerkandera adusta lignin peroxidase gene. Appl Microbiol Biotechnol. 1991 Jul;35(4):510–514. doi: 10.1007/BF00169758. [DOI] [PubMed] [Google Scholar]
  20. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  21. Paice M. G., Reid I. D., Bourbonnais R., Archibald F. S., Jurasek L. Manganese Peroxidase, Produced by Trametes versicolor during Pulp Bleaching, Demethylates and Delignifies Kraft Pulp. Appl Environ Microbiol. 1993 Jan;59(1):260–265. doi: 10.1128/aem.59.1.260-265.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Perez J., Jeffries T. W. Mineralization of C-Ring-Labeled Synthetic Lignin Correlates with the Production of Lignin Peroxidase, not of Manganese Peroxidase or Laccase. Appl Environ Microbiol. 1990 Jun;56(6):1806–1812. doi: 10.1128/aem.56.6.1806-1812.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Périé F. H., Gold M. H. Manganese regulation of manganese peroxidase expression and lignin degradation by the white rot fungus Dichomitus squalens. Appl Environ Microbiol. 1991 Aug;57(8):2240–2245. doi: 10.1128/aem.57.8.2240-2245.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Ramachandra M., Crawford D. L., Hertel G. Characterization of an extracellular lignin peroxidase of the lignocellulolytic actinomycete Streptomyces viridosporus. Appl Environ Microbiol. 1988 Dec;54(12):3057–3063. doi: 10.1128/aem.54.12.3057-3063.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Saloheimo M., Barajas V., Niku-Paavola M. L., Knowles J. K. A lignin peroxidase-encoding cDNA from the white-rot fungus Phlebia radiata: characterization and expression in Trichoderma reesei. Gene. 1989 Dec 28;85(2):343–351. doi: 10.1016/0378-1119(89)90427-7. [DOI] [PubMed] [Google Scholar]
  26. Sarkanen S., Razal R. A., Piccariello T., Yamamoto E., Lewis N. G. Lignin peroxidase: toward a clarification of its role in vivo. J Biol Chem. 1991 Feb 25;266(6):3636–3643. [PubMed] [Google Scholar]
  27. Schreiner R. P., Stevens S. E., Tien M. Oxidation of Thianthrene by the Ligninase of Phanerochaete chrysosporium. Appl Environ Microbiol. 1988 Jul;54(7):1858–1860. doi: 10.1128/aem.54.7.1858-1860.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  28. Tien M., Kirk T. K. Lignin-Degrading Enzyme from the Hymenomycete Phanerochaete chrysosporium Burds. Science. 1983 Aug 12;221(4611):661–663. doi: 10.1126/science.221.4611.661. [DOI] [PubMed] [Google Scholar]
  29. Tien M., Kirk T. K. Lignin-degrading enzyme from Phanerochaete chrysosporium: Purification, characterization, and catalytic properties of a unique H(2)O(2)-requiring oxygenase. Proc Natl Acad Sci U S A. 1984 Apr;81(8):2280–2284. doi: 10.1073/pnas.81.8.2280. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Tu C. P., Weiss M. J., Karakawa W. W., Reddy C. C. Cloning and sequence analysis of a cDNA plasmid for one of the rat liver glutathione S-transferase subunits. Nucleic Acids Res. 1982 Sep 25;10(18):5407–5419. doi: 10.1093/nar/10.18.5407. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Wang Z. M., Bleakley B. H., Crawford D. L., Hertel G., Rafii F. Cloning and expression of a lignin peroxidase gene from Streptomyces viridosporus in Streptomyces lividans. J Biotechnol. 1990 Feb;13(2-3):131–144. doi: 10.1016/0168-1656(90)90099-w. [DOI] [PubMed] [Google Scholar]
  32. Wariishi H., Valli K., Gold M. H. In vitro depolymerization of lignin by manganese peroxidase of Phanerochaete chrysosporium. Biochem Biophys Res Commun. 1991 Apr 15;176(1):269–275. doi: 10.1016/0006-291x(91)90919-x. [DOI] [PubMed] [Google Scholar]
  33. de Jong E., Field J. A., de Bont J. A. Evidence for a new extracellular peroxidase. Manganese-inhibited peroxidase from the white-rot fungus Bjerkandera sp. BOS 55. FEBS Lett. 1992 Mar 24;299(1):107–110. doi: 10.1016/0014-5793(92)80111-s. [DOI] [PubMed] [Google Scholar]

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