Skip to main content
Journal of Bacteriology logoLink to Journal of Bacteriology
. 1994 Nov;176(22):6836–6841. doi: 10.1128/jb.176.22.6836-6841.1994

Single-step purification of Proteus mirabilis urease accessory protein UreE, a protein with a naturally occurring histidine tail, by nickel chelate affinity chromatography.

B Sriwanthana 1, M D Island 1, D Maneval 1, H L Mobley 1
PMCID: PMC197051  PMID: 7961442

Abstract

Proteus mirabilis urease, a nickel metalloenzyme, is essential for the virulence of this species in the urinary tract. Escherichia coli containing cloned structural genes ureA, ureB, and ureC and accessory genes ureD, ureE, ureF, and ureG displays urease activity when cultured in M9 minimal medium. To study the involvement of one of these accessory genes in the synthesis of active urease, deletion mutations were constructed. Cultures of a ureE deletion mutant did not produce an active urease in minimal medium. Urease activity, however, was partially restored by the addition of 5 microM NiCl2 to the medium. The predicted amino acid sequence of UreE, which concludes with seven histidine residues among the last eight C-terminal residues (His-His-His-His-Asp-His-His-His), suggested that UreE may act as a Ni2+ chelator for the urease operon. To exploit this potential metal-binding motif, we attempted to purify UreE from cytoplasmic extracts of E. coli containing cloned urease genes. Soluble protein was loaded onto a nickel-nitrilotriacetic acid column, a metal chelate resin with high affinity for polyhistidine tails, and bound protein was eluted with a 0 to 0.5 M imidazole gradient. A single polypeptide of 20-kDa apparent molecular size, as shown by sodium dodecyl sulfate-10 to 20% polyacrylamide gel electrophoresis, was eluted between 0.25 and 0.4 M imidazole. The N-terminal 10 amino acids of the eluted polypeptide exactly matched the deduced amino acid sequence of P. mirabilis UreE. The molecular size of the native protein was estimated on a Superdex 75 column to be 36 kDa, suggesting that the protein is a dimer. These data suggest that UreE is a Ni(2)+-binding protein that is necessary for synthesis of a catalytically active urease at low Ni(2+) concentrations.

Full text

PDF
6836

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Cussac V., Ferrero R. L., Labigne A. Expression of Helicobacter pylori urease genes in Escherichia coli grown under nitrogen-limiting conditions. J Bacteriol. 1992 Apr;174(8):2466–2473. doi: 10.1128/jb.174.8.2466-2473.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Dyke B., Hegenauer J., Saltman P., Laurs R. M. Isolation and characterization of a new zinc-binding protein from albacore tuna plasma. Biochemistry. 1987 Jun 2;26(11):3228–3234. doi: 10.1021/bi00385a044. [DOI] [PubMed] [Google Scholar]
  3. Gherardini F. C., Hobbs M. M., Stamm L. V., Bassford P. J., Jr Complementation of an Escherichia coli proC mutation by a gene cloned from Treponema pallidum. J Bacteriol. 1990 Jun;172(6):2996–3002. doi: 10.1128/jb.172.6.2996-3002.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Griffith D. P., Musher D. M., Itin C. Urease. The primary cause of infection-induced urinary stones. Invest Urol. 1976 Mar;13(5):346–350. [PubMed] [Google Scholar]
  5. Hamilton-Miller J. M., Gargan R. A. Rapid screening for urease inhibitors. Invest Urol. 1979 Mar;16(5):327–328. [PubMed] [Google Scholar]
  6. Hausinger R. P. Nickel utilization by microorganisms. Microbiol Rev. 1987 Mar;51(1):22–42. doi: 10.1128/mr.51.1.22-42.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Hu L. T., Nicholson E. B., Jones B. D., Lynch M. J., Mobley H. L. Morganella morganii urease: purification, characterization, and isolation of gene sequences. J Bacteriol. 1990 Jun;172(6):3073–3080. doi: 10.1128/jb.172.6.3073-3080.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Janknecht R., de Martynoff G., Lou J., Hipskind R. A., Nordheim A., Stunnenberg H. G. Rapid and efficient purification of native histidine-tagged protein expressed by recombinant vaccinia virus. Proc Natl Acad Sci U S A. 1991 Oct 15;88(20):8972–8976. doi: 10.1073/pnas.88.20.8972. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Johnson D. E., Russell R. G., Lockatell C. V., Zulty J. C., Warren J. W., Mobley H. L. Contribution of Proteus mirabilis urease to persistence, urolithiasis, and acute pyelonephritis in a mouse model of ascending urinary tract infection. Infect Immun. 1993 Jul;61(7):2748–2754. doi: 10.1128/iai.61.7.2748-2754.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Jones B. D., Lockatell C. V., Johnson D. E., Warren J. W., Mobley H. L. Construction of a urease-negative mutant of Proteus mirabilis: analysis of virulence in a mouse model of ascending urinary tract infection. Infect Immun. 1990 Apr;58(4):1120–1123. doi: 10.1128/iai.58.4.1120-1123.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Jones B. D., Mobley H. L. Genetic and biochemical diversity of ureases of Proteus, Providencia, and Morganella species isolated from urinary tract infection. Infect Immun. 1987 Sep;55(9):2198–2203. doi: 10.1128/iai.55.9.2198-2203.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Jones B. D., Mobley H. L. Proteus mirabilis urease: genetic organization, regulation, and expression of structural genes. J Bacteriol. 1988 Aug;170(8):3342–3349. doi: 10.1128/jb.170.8.3342-3349.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Jones B. D., Mobley H. L. Proteus mirabilis urease: nucleotide sequence determination and comparison with jack bean urease. J Bacteriol. 1989 Dec;171(12):6414–6422. doi: 10.1128/jb.171.12.6414-6422.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  15. Lee M. H., Mulrooney S. B., Hausinger R. P. Purification, characterization, and in vivo reconstitution of Klebsiella aerogenes urease apoenzyme. J Bacteriol. 1990 Aug;172(8):4427–4431. doi: 10.1128/jb.172.8.4427-4431.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Lee M. H., Mulrooney S. B., Renner M. J., Markowicz Y., Hausinger R. P. Klebsiella aerogenes urease gene cluster: sequence of ureD and demonstration that four accessory genes (ureD, ureE, ureF, and ureG) are involved in nickel metallocenter biosynthesis. J Bacteriol. 1992 Jul;174(13):4324–4330. doi: 10.1128/jb.174.13.4324-4330.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Lee M. H., Pankratz H. S., Wang S., Scott R. A., Finnegan M. G., Johnson M. K., Ippolito J. A., Christianson D. W., Hausinger R. P. Purification and characterization of Klebsiella aerogenes UreE protein: a nickel-binding protein that functions in urease metallocenter assembly. Protein Sci. 1993 Jun;2(6):1042–1052. doi: 10.1002/pro.5560020617. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Maeda M., Hidaka M., Nakamura A., Masaki H., Uozumi T. Cloning, sequencing, and expression of thermophilic Bacillus sp. strain TB-90 urease gene complex in Escherichia coli. J Bacteriol. 1994 Jan;176(2):432–442. doi: 10.1128/jb.176.2.432-442.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Mobley H. L., Hausinger R. P. Microbial ureases: significance, regulation, and molecular characterization. Microbiol Rev. 1989 Mar;53(1):85–108. doi: 10.1128/mr.53.1.85-108.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Mobley H. L., Jones B. D., Jerse A. E. Cloning of urease gene sequences from Providencia stuartii. Infect Immun. 1986 Oct;54(1):161–169. doi: 10.1128/iai.54.1.161-169.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Moos M., Jr, Nguyen N. Y., Liu T. Y. Reproducible high yield sequencing of proteins electrophoretically separated and transferred to an inert support. J Biol Chem. 1988 May 5;263(13):6005–6008. [PubMed] [Google Scholar]
  22. Mulrooney S. B., Hausinger R. P. Sequence of the Klebsiella aerogenes urease genes and evidence for accessory proteins facilitating nickel incorporation. J Bacteriol. 1990 Oct;172(10):5837–5843. doi: 10.1128/jb.172.10.5837-5843.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Nicholson E. B., Concaugh E. A., Foxall P. A., Island M. D., Mobley H. L. Proteus mirabilis urease: transcriptional regulation by UreR. J Bacteriol. 1993 Jan;175(2):465–473. doi: 10.1128/jb.175.2.465-473.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Park I. S., Hausinger R. P. Site-directed mutagenesis of Klebsiella aerogenes urease: identification of histidine residues that appear to function in nickel ligation, substrate binding, and catalysis. Protein Sci. 1993 Jun;2(6):1034–1041. doi: 10.1002/pro.5560020616. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Rando D., Steglitz U., Mörsdorf G., Kaltwasser H. Nickel availability and urease expression in Proteus mirabilis. Arch Microbiol. 1990;154(5):428–432. doi: 10.1007/BF00245222. [DOI] [PubMed] [Google Scholar]
  26. Sriwanthana B., Island M. D., Mobley H. L. Sequence of the Proteus mirabilis urease accessory gene ureG. Gene. 1993 Jul 15;129(1):103–106. doi: 10.1016/0378-1119(93)90703-6. [DOI] [PubMed] [Google Scholar]
  27. Sriwanthana B., Mobley H. L. Proteus mirabilis urease: histidine 320 of UreC is essential for urea hydrolysis and nickel ion binding within the native enzyme. Infect Immun. 1993 Jun;61(6):2570–2577. doi: 10.1128/iai.61.6.2570-2577.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  28. Warren J. W., Tenney J. H., Hoopes J. M., Muncie H. L., Anthony W. C. A prospective microbiologic study of bacteriuria in patients with chronic indwelling urethral catheters. J Infect Dis. 1982 Dec;146(6):719–723. doi: 10.1093/infdis/146.6.719. [DOI] [PubMed] [Google Scholar]
  29. Wülfing C., Lombardero J., Plückthun A. An Escherichia coli protein consisting of a domain homologous to FK506-binding proteins (FKBP) and a new metal binding motif. J Biol Chem. 1994 Jan 28;269(4):2895–2901. [PubMed] [Google Scholar]

Articles from Journal of Bacteriology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES