Abstract
We previously applied selective breeding on outbred mice to increase maternal aggression (maternal defense). In this study, we compared gene expression within a continuous region of the CNS involved in maternal aggression (hypothalamus and preoptic regions) between lactating selected (S) and non-selected control (C) mice (n = 6 per group). Using microarrays representing over 40,000 genes or expressed sequence tags, two statistical algorithms were used to identify significant differences in gene expression: robust multi array and the probe logarithmic intensity error method. ∼ 200 genes were identified as significant using an intersection from both techniques. A subset of genes were examined for confirmation by real-time PCR. Significant decreases were found in S mice for neurotensin and neuropeptide Y receptor Y2 (both confirmed by PCR). Significant increases were found in S mice for neuronal nitric oxide synthase (confirmed by PCR), the K+ channel subunit, Kcna1 (confirmed by PCR), corticotrophin releasing factor binding protein (just above significance using PCR; p = 0.051), and GABA A receptor subunit 1A (not confirmed by PCR, but similar direction). S mice also exhibited significantly higher levels of the neurotransmitter receptor, adenosine A1 receptor, and the transcription factors, c-Fos, and Egr-1. Interestingly, for 24 genes related to metabolism, all were significantly elevated in S mice, suggesting altered metabolism in these mice. Together, this study provides a list of candidate genes (some previously implicated in maternal aggression and some novel) that may play an important role in the production of this behavior.
Keywords (5-10): maternal aggression, microarray, lactation, hypothalamus, selection, preoptic area, nNOS, NPY, CRF
Introduction
Maternal aggression (also termed maternal defense behavior) is conserved in mammals and birds. In rodents, maternal defense behavior involves attacks against intruders by lactating females that is hypothesized to protect the offspring from potential harm (Agrell et al. 1998; Gammie & Lonstein 2005; Parmigiani et al. 1999; Wolff 1985, 1993). However, not all studies find maternal aggression to be a deterrent to infanticide, including in mice (Ebensperger 1998) and common voles (Heise & Lippke 1997), although in the latter study heightened aggression was associated with decreases in rate of infanticide. For reviews of the ecological relevance of maternal aggression, see (Lonstein & Gammie 2002; Wolff & Peterson 1998). One previous approach for understanding the genetic basis of defense behavior involved using quantitative trait loci to identify chromosomal regions that corresponded with levels of maternal behavior, including aggression (Peripato et al. 2002). However, the actual genes contributing to the phenotype have yet to be isolated. Another, more common approach has been to study whether or how this behavior is altered in knockout mice. For example, maternal aggression is decreased in mice missing either neuronal nitric oxide synthase (Nos1) (Gammie & Nelson 1999), a subset of pheromone receptors (Del Punta et al. 2002), or the trp2 ion channel that transduces pheromonal inputs (Leypold et al. 2002). Conversely, maternal aggression is significantly increased in mice missing estrogen receptor β (Ogawa et al. 2005). Another approach for examining the genetics of behavior has been to conduct selection studies and then perform high density gene expression analysis of the CNS to uncover gene candidates (Bronikowski et al. 2004; Feldker et al. 2003a; Feldker et al. 2003b). To date, this approach has not been used for studies on maternal aggression.
We have recently applied selection for high maternal aggression on outbred mice of the hsd:ICR (CD-1) strain (Gammie et al. 2006). We found a realized heritability of this trait of 0.40 and by maintaining selected (S) and non-selected control (C) lines, we set up the possibility of examining gene expression differences between groups that could provide insights into the genetic basis of maternal aggression. This study involved examining differences in gene expression between S and C mice in continuous portion of the CNS (including preoptic and hypothalamic regions) that contains regions previously implicated in maternal aggression. For example, medial preoptic area and nucleus show altered brain activity in association with maternal aggression (Gammie & Nelson 1999, 2001; Hasen & Gammie 2005). Paraventricular nucleus likewise exhibits altered neuronal activity with maternal aggression testing (Gammie & Nelson 2001; Hasen & Gammie 2005) and lesions of this region alter maternal aggression output (Consiglio & Lucion 1996; Giovenardi et al. 1998). Lateral hypothalamus is the sole brain region containing of hypocretin neurons and recent work found this peptide to modulate maternal aggression (D'Anna & Gammie 2006). The use of high-density oligonucleotide microarrays allowed for the simultaneous examination of ∼ 40,000 genes or expressed sequence tags. The aim of study was to identify genes that could contribute to maternal aggression output. We report here the gene expression profiles of S and C mice using high-density oligonucleotide microarrays, identify new genes of interest, compare results to known regulators of maternal aggression, and discuss the relevance of gene expression changes to the biology of maternal aggression.
Materials and methods
Experimental Subjects
Female (focal) mice came from an on-going selection study for high maternal aggression. The founding population of S and C mice were derived from outbred hsd:ICR mice (Mus domesticus) (Harlan, Madison, WI). The test mice in this study came from the second litter of S and C dams tested in Generation 5 of the selection study (Gammie et al. 2006). All animals were age matched (∼70 days old at time of dissection). For mating, each female was housed with a single breeder male (hsd:ICR strain; purchased separately from Harlan and not related to focal mice) for 2 weeks. When breeder males were removed, each female was housed singly and provided precut nesting material until dissections. Polypropylene cages were changed once weekly, but when pups were born (postpartum Day 0), cages were not changed for any animals for the remainder of the experiment. Pups were culled to 12 on postpartum Day 0. All animals were housed in the same room and cages of S and C females were alternated with one another on the same shelves. All dissections occurred on postpartum Day 5. A 14:10 light/dark cycle with lights on at 0600 CST was used. Female mice were given ad lib access to breeder chow (Harlan) and tap water whereas breeder and intruder males were provided with regular rodent chow. Intruder male mice were of the hsd:ICR strain and were group housed 4 per cage. All animal work was conducted with accepted standards of humane care and studies were approved by the University of Wisconsin animal care and use committee.
Maternal aggression testing
On postpartum Day 5, each dam was exposed to an intruder male for 4 min in her home cage between 0900 and 1130 h. The pups were removed from the cage just prior to the behavioral test. Removal of the pups from a dam just before an aggressive test does not diminish the expression of maternal aggression in mice (Svare et al. 1981). The day of testing occurred within the window of peak maternal aggression that occurs from postpartum Day 4 though 10 in mice (Svare 1990). An intruder male mouse was placed in the dam's home cage and the test session was recorded on videotape and subsequently analyzed off-line to quantify maternal aggression. Maternal aggression scoring was conducted by individuals blind to experimental conditions and treatments. For quantification of maternal aggression total duration of attacks was examined. At the completion of each test, the dams were immediately killed and brain tissue collected as described below.
Tissue collection
On postpartum Day 5, brains were removed from 13 S and 14 C females immediately following a 4 min aggression test. Dissections occurred between 0900 and 1130h. Dissections of the 12 mice (6 S and 6 C) used for gene expression analysis all occurred within the same week. S mice used for array analysis all met criterion (at least 40 sec of total time aggression) and C mice were randomly chosen from a group that was within 2 standard deviations of the C group mean time aggressive (4 sec). Animals were killed by cervical dislocation and then decapitated. The whole brain was removed and immediately placed ventral side up on a covered Petri dish filled with ice. Major cuts to the whole brain were performed using a razor blade and smaller cuts were performed using a scalpel. All cuts were made under a dissecting microscope. Vertical cuts were made at Bregma −0.70mm and Bregma −2.06mm using external landmarks and were verified after cutting by identifying key landmarks on the cut surface of the brain. Focal tissue was separated by running the scalpel blade along the line of the optic nerve as it ascends into the brain and then cutting laterally toward the midline using the bottom of the lateral ventricle as a landmark (see Fig. 1).
Fig. 1.
Schematic representation of the brain regions (light, non-gray) dissected for gene array analysis. Abbreviation are: anterior hypothalamic area (AH); arcuate nucleus (Arc); bed nucleus of the stria terminalis, ventral (BNSTv); dorsomedial nucleus of the hypothalamus (DM); lateral hypothalamus (LH); medial preoptic area (MPA); medial preoptic nucleus (MPN); and ventromedial nucleus of the hypothalamus (VMH).
The dissected region was frozen in a plastic tube on dry ice and stored at -80 C until processing. Total RNA was isolated using a GenElute Mammalian Total RNA Miniprep Kit (Cat#RTN-70, Sigma-Aldrich, St. Louis, MO). Following isolation, RNA concentration was determined using a BioMate 3 spectrophotometer (Thermo Spectronic, Lanham, MD) and stored at −70°C until being processed for either gene array analysis or real-time PCR.
High-Density Oligonucleotide Array Hybridization
Microarray analysis was performed with Mouse Genome 430 2.0 GeneChip arrays (Affymetrix, Santa Clara, CA) using targets derived from total RNA isolated from mouse CNS as described above. RNA was prepared and labeled following the protocols and procedures described in the Affymetrix Expression Analysis Technical Manual (www.affymetrix.com). In brief, after total RNA was isolated, double stranded cDNA was synthesized from purified RNA and was used as a template to synthesize biotin-labeled cRNA by in vitro transcription using the GeneChip array IVT Labeling kit (Affymetrix). Amplified cRNA was fragmented and hybridized to the arrays according to the manufacturer's procedures (www.affymetrix.com). Target preparation, hybridization and data collection were performed by the Gene Expression Center at the University of Wisconsin-Madison. To extract the fluorescent signal from each feature on the GeneChip array, all arrays were scanned at 570 nm using the Affymetrix GC3000 Scanner. Fluorescent signals corresponding to hybridization intensities were analyzed with the Affymetrix GCOS vs 1.2.1 software using the following settings: Algorithm defaults, Alpha1, 0.05; alpha2, 0.065; Tau, 0.015; Gamma 1L 0.0045; Gamma 1H 0.0045; Gamma 2L 0.006; Gamma2H 0.006; Perturbation 1.1. In all analyses the probe sets were scaled to a target signal of 1000 using the “Scale” function in the GCOS software.
Statistical Analysis
Two statistical approaches were used for analysis. First, robust multiarray analysis (RMA) (Han et al. 2004; Irizarry et al. 2003) was run on the data set using ArrayAssist (Iobian Informatics, La Jolla, CA). RMA models are additive on the log2 intensity scale with additive error and are fit iteratively for each probe set. Second, the Probe Logarithmic Intensity Error (PLIER) method (Affymetrix) employing perfect match signaling was used. PLIER accounts for the difference between probes by means of probe affinities which represent the strength of signal produced at a specific concentration for a given probe. Probe affinities are calculated using experimental data across multiple arrays. PLIER was designed to improve analysis of both high and low intensity signals.
Verification of microarray with real-time PCR
RNA was purified as described above and was taken from the same mice as used for array analysis. A StrataScript First Strand Synthesis system kit (Cat# 200420, Stratagene, Cedar Creek, TX) was used to reverse transcribe 1 μg of RNA to cDNA in an Eppendorf MasterCycler Personal PCR machine. The cDNA was then amplified using Invitrogen LUX primers (Invitrogen, Carlsbad, CA) in combination with hypoxanthine phosphorybosyltransferase 1 (HPRT1, Cat#105M-02, Invitrogen). All primers were designed using Invitrogen D-LUX Designer (Invitrogen) (locations shown in Table 1) and were targeted to regions of the gene identified as being significantly altered in expression by the Affymetrix gene array probes. The genes were chosen for PCR analysis with a focus on possible maternal aggression pathways. For example, Nos1 had previously been implicated in maternal aggression. Although neither Crhbp, neurotensin, Gabr1a, nor Npy2r had specifically been implicated in aggression, they are parts of pathways regulating stress reactivity that could modulate aggression. The K+ channel, Kcna1, was examined because more than one probe set identified this gene as significant (see Supplemental Table 1) and other K+ channel subunits were upregulated in S mice (see Table 2), so altered K+ channel activity could indicate an important, but not obvious, means for regulating aggression In all cases (except for Gabra1) the standard gene accession number was used to load the gene sequence on which the D-LUX Designer created the probe. For Gabra1, the mouse RNA transcript, AK141596, was used as this allowed for targeting near the distal end of the gene identified as having altered expression in S mice. However, these primers used still were not able to cover the region identified by the Affymetrix probe. HPRT1 is commonly used as a reference gene in Real-Time PCR. Primers labeled with either the fluorogenic reporter dyes 6-carboxy-fluorescein (FAM) or 6-carboxy-4′, 5′-dichloro-2′, 7′-dimethyoxyfluorescein (JOE) were multiplexed in the same tube during the Real-Time PCR reaction. This allowed for the amplification of the target and control gene within the same reaction tube. Kcna1, neurotensin, Nos1, Npy2r, Crhbp, and Gabra1 were labeled with FAM, which is read at 492 -516 nm wavelengths. HPRT1 was labeled with JOE, which is read at 535 -555nm wavelengths. In order to more tightly control for variation in the amplification procedure, we performed a dilution curve using the HPRT1 primers so that the range of amplification more closely resembled that of the gene of interest.
Table 1.
List of genes and the primers used (along with primer position) for real-time PCR analysis.
| Gene | Primer | Primer position | |
|---|---|---|---|
| Kcna1 | Forward | 5′-CCA TGA CCA CTG TGG GAT ACG-3′ | 2198 |
| Reverse | 5′-GCC TCC AAC TGT CAC AGG G-3′ | 2206 | |
| Neurotensin | Forward | 5′-TAA ATA ACG TGA ACA GCC-3′ | 305 |
| Reverse | 5′-CCA ACA AGG TCG TCA TCCA TGC-3′ | 326 | |
| Nos1 | Forward | 5′-TCA AGT ACG CCA CCA ACA AAG G-3′ | 1456 |
| Reverse | 5′-TGA GGG AAT ATA GTG ATG GC-3′ | 1468 | |
| Npy2r | Forward | 5′-CAT CAT ATC TTT CTC CTA CAC C -3′ | 1010 |
| Reverse | 5′-GAC GTG GTT CCT CAG CTT ACT CC -3′ | 1016 | |
| Crhbp | Forward | 5′-AGC TAG AAA CCT CGA CCG GAA AC-3′ | 1028 |
| Reverse | 5′-CAT GTC AAT CAC TGA AGC-3′ | 1067 | |
| Gabra1 | Forward | 5′-CCT TAG TGC AGT GAA GTG GCA AT-3′ | 4417 |
| Reverse | 5′-GTT TTG CTA AAC TCT GGA AAG-3′ | 4462 |
Table 2.
List of genes showing highest significant differences in gene expression between S and C mice when using an intersection of RMA and PLIER statistics (intersected p<0.018). Fold change greater than 1.0 indicate increases in S relative to C mice.
| Accession # | Fold change | Gene |
|---|---|---|
| Neuropeptide signaling | ||
| AI854101 | 1.278535 | corticotropin releasing hormone binding protein |
| NM_008731 | 0.750767 | neuropeptide Y receptor Y2 |
| NM_024435 | 0.740359 | neurotensin |
| Receptor | ||
| NM_053190 | 1.34706 | endothelial differentiation sphingolipid G-protein-coupled receptor 8 |
| AK013481 | 1.180269 | Eph receptor A4 |
| BE630294 | 1.141175 | adenosine A1 receptor |
| BB279185 | 1.122029 | progestin and adipoQ receptor family member IV |
| BE945884 | 1.118826 | GABA A receptor subunit alpha 1 |
| AW555641 | 1.116437 | attractin like 1 |
| AW121511(2) | 1.081967 | seizure related 6 homolog (mouse)-like 2 |
| Ion channel | ||
| L16912 | 1.978007 | K+ large conductance calcium-activated channel subfamily M alpha member 1 |
| BQ175978(3) | 1.256841 | K+ voltage-gated channel shaker-related subfamily member 1 |
| BB750192 | 1.159445 | K+ voltage gated channel shaw-related subfamily member 1 |
| U31908 | 1.154564 | K+ voltage-gated channel shaker-related subfamily beta member 2 |
| BI408602 | 1.125937 | K+ channel tetramerisation domain containing 17 |
| Kinase/phosphatase | ||
| AK017345 | 1.356632 | pantothenate kinase 1 |
| BB208212 | 1.156457 | phosphatidylinositol 4-kinase type 2 alpha |
| NM_011049 | 1.15546 | PCTAIRE-motif protein kinase 1 |
| U35368 | 1.154432 | protein tyrosine phosphatase receptor type E |
| L28176 | 1.144761 | neurofibromatosis 2 |
| BE136125 | 1.133364 | dual specificity phosphatase 7 |
| BG071931 | 1.123121 | calcium/calmodulin-dependent protein kinase ID |
| Transcription factor | ||
| BB579760 | 1.56199 | zinc finger protein 191 |
| AV026617 | 1.548904 | FBJ osteosarcoma oncogene |
| NM_007913 | 1.335803 | early growth response 1 |
| BB322941 | 1.226015 | nuclear receptor subfamily 4 group A member 2 (nurr1) |
| BC017622 | 1.187674 | zinc finger FYVE domain containing 20 |
| BE947440 | 1.169332 | scratch homolog 1 zinc finger protein |
| AI875447 | 1.168121 | zinc finger DHHC domain containing 9 |
| AV322952 | 1.154524 | forkhead box P2 |
| BE993443 | 1.135146 | POU domain class 3 transcription factor 3 |
| D49658 | 0.491125 | LIM homeobox protein 8 |
| Signal transduction | ||
| BM230524 | 1.379079 | rap guanine nucleotide exchange factor 5 |
| AV291679 | 1.263038 | ras association domain family 4 |
| BC027242 | 1.214817 | vav 3 oncogene |
| BF453885 | 1.222874 | CDC42 effector protein 2 |
| NM_025331 | 1.210454 | guanine nucleotide binding protein gamma 11 |
| AV287690 | 1.209128 | InaD-like |
| AF326561(2) | 1.197196 | SH3-domain GRB2-like 2 |
| NM_019566 | 1.19588 | ras homolog gene family member G |
| NM_009167 | 1.191388 | src homology 2 domain-containing transforming protein C3 |
| BC016250 | 1.185892 | CDC42 effector protein 1 |
| AK020972(2) | 1.185843 | SET binding factor 1 |
| AV214969 | 1.160186 | left-right determination factor 2 |
| NM_009307 | 1.168606 | synaptotagmin 2 |
| NM_011838 | 1.15478 | Ly6/neurotoxin 1 |
| BC024864 | 1.147599 | SH3 and cysteine rich domain 2 |
| BC014803(2) | 1.145801 | complexin 1 |
| AK014572 | 1.133278 | solute carrier family 6 (glycine transporter) member 9 |
| NM_008712 | 1.13129 | nitric oxide synthase 1 neuronal |
| AV276781 | 0.842117 | tripartite motif protein 23 |
| BB025231 | 0.755404 | nischarin |
| BE305862 | 0.712609 | SH3 multiple domains 2 |
| DNA-related function | ||
| NM_007960 | 1.180149 | ets variant gene 1 |
| NM_025822 | 1.15719 | arginine/serine-rich coiled-coil 1 |
| BC027426 | 1.152873 | cellular repressor of E1A-stimulated genes 1 |
| NM_008671 | 1.064322 | nucleosome assembly protein 1-like 2 |
| BB409568 | 0.56779 | euchromatic histone methyltransferase 1 |
| Extracellular signaling | ||
| BI452727 | 1.224902 | follistatin-like 1 |
| AA144045 | 1.178888 | semaphorin 7A |
| BB444134 | 0.625103 | follistatin |
| Metabolism | ||
| NM_013467 | 2.067343 | aldehyde dehydrogenase family 1 subfamily A1 |
| AI596237 | 1.35663 | lysosomal acid lipase 1 |
| BC015253 | 1.269326 | arachidonate 15-lipoxygenase second type |
| AI842353 | 1.256185 | kazal-type serine protease inhibitor domain 1 |
| BM951276 | 1.23124 | fukutin related protein |
| BG067254 | 1.226121 | coproporphyrinogen oxidase |
| BB048942 | 1.223529 | polypeptide N-acetylgalactosaminyltransferase 9 |
| BC003491 | 1.222964 | haloacid dehalogenase-like hydrolase domain containing 3 |
| AK014670 | 1.218375 | CDP-diacylglycerol synthase 1 |
| NM_011224 | 1.214416 | muscle glycogen phosphorylase |
| BC019391 | 1.208962 | glycerol-3-phosphate dehydrogenase 1 |
| AA414485 | 1.200591 | seven in absentia 2 |
| BB707122 | 1.196928 | TCDD-inducible poly(ADP-ribose) polymerase |
| AV231866 | 1.185986 | N-acetylgalactosaminyltransferase T-6 |
| NM_024229 | 1.178394 | phosphate cytidylyltransferase 2 ethanolamine |
| NM_009752 | 1.173722 | galactosidase beta 1 |
| BB366634 | 1.173419 | male sterility domain containing 1 |
| BC026595 | 1.164121 | cystathionine beta-synthase |
| BC017126 | 1.152518 | neurochondrin |
| BC018179 | 1.150765 | ubiquitin specific protease 1 |
| BM944122 | 1.143801 | ATPase type 13A2 |
| NM_013759 | 1.133139 | selenoprotein X 1 |
| BC003329 | 1.127548 | makorin ring finger protein 1 |
| AK018159(2) | 1.112904 | proprotein convertase subtilisin/kexin type 2 |
| Structure | ||
| BC005679 | 1.891608 | syndecan 4 |
| AK011116 | 1.69255 | hemoglobin alpha adult chain 1 |
| NM_010758 | 1.337203 | myelin-associated glycoprotein |
| NM_080454 | 1.336939 | gap junction membrane channel protein alpha 12 |
| BC026833(2) | 1.328426 | gap junction membrane channel protein beta 1 |
| BC006045 | 1.257563 | pleckstrin homology domain containing family H (with MyTH4 domain) member 1 |
| BC016584 | 1.248811 | glycolipid transfer protein |
| NM_019999 | 1.241163 | brain protein 17 |
| AB059644 | 1.235731 | calmin |
| BC011482 | 1.219334 | membrane bound C2 domain containing protein |
| AF291655 | 1.213598 | tenomodulin |
| AK018783(2) | 1.209132 | vesicle-associated membrane protein 1 |
| AV337421(2) | 1.205978 | R7 binding protein |
| M35131 | 1.190867 | neurofilament heavy polypeptide |
| BI328541 | 1.186428 | kinesin family member 5B |
| AK005096 | 1.170625 | fibronectin type III domain containing 5 |
| AV220161 | 1.167709 | RAB6B member RAS oncogene family |
| NM_018790 | 1.165217 | activity regulated cytoskeletal-associated protein |
| BB757269 | 1.164057 | pleckstrin homology domain containing family M (with RUN domain) member 2 |
| BB082407 | 1.16317 | hyaluronan and proteoglycan link protein 4 |
| AF041861 | 1.152035 | synaptojanin 2 |
| NM_133769 | 1.141642 | cytoplasmic FMR1 interacting protein 2 |
| M20480 | 1.137212 | neurofilament light polypeptide |
| BC025568 | 1.110304 | tetraspanin 14 |
| AW556311 | 0.876037 | ELOVL family member 5 elongation of long chain fatty acids (yeast) |
| BB369657 | 0.844514 | pleckstrin homology domain containing family A member 5 |
| NM_011261 | 0.834896 | reelin |
| NM_023289 | 0.832813 | CEA-related cell adhesion molecule 11 |
| BM231698 | 0.830714 | exostoses (multiple) 1 |
| BC019745 | 0.815841 | transmembrane protein 2 |
| NM_019394 | 0.790876 | melanoma inhibitory activity 1 |
| Neurimmune | ||
| AF010586 | 1.194147 | chemokine (C-X3-C motif) ligand 1 |
| NM_010701 | 0.785721 | leukocyte cell derived chemotaxin 1 |
| AV229143 | 0.762351 | interferon activated gene 202B |
| NM_008332 | 0.723433 | interferon-induced protein with tetratricopeptide repeats 2 |
| Cell cycle/death | ||
| NM_130859 | 1.346454 | caspase recruitment domain family member 10 |
| AA201054 | 1.235925 | TNFRSF1A-associated via death domain |
Quantitative Real-Time PCR was carried out in a Stratagene Mx3000P Real-time PCR system. Each sample was run in triplicate. The amplification protocol is as follows: an initial annealing step at 50°C for 2 min and an initial melting step at 95°C for 2 min, followed by 35 cycles of a 95°C melting step for 15 sec, a 55°C annealing step for 30 sec, and a 72°C elongation step for 30 sec. Following amplification, a dissociation curve analysis was performed to insure purity of PCR products. Data were analyzed under the following program term settings: (a) threshold fluorescence-amplification-based, (b) baseline correction-adaptive baseline with Mx4000 v 1.00 to v 3.00 algorithm, and (c) smoothing- moving average with amplification averaging 3 points. Relative mRNA levels were calculated using the ΔΔCT method (Livak & Schmittgen 2001). Briefly, the average CT of the reference gene (HPRT1) was subtracted from the average CT of the gene of interest (i.e., neurotensin or Npy2r) to determine the ΔCT for each sample. The ΔCT of the calibrator (an untreated control) is then subtracted from the ΔCT of each of the samples to determine the ΔΔCT. This number is then used to determine the amount of mRNA relative to the calibrator and normalized by HPRT1, or the n-fold difference. The n-fold difference was calculated by the equation 2(−ΔΔCT). Statistical comparisons were determined using Sigma Stat statistical analysis software for Windows v 3.11 (SPSS Inc, Chicago, IL). One-tailed t tests were used, as we were able to predict direction based on data from the microarrays.
Results
Aggression differences between S and C mice
As expected, S mice were highly aggressive relative to the C mice. The 6 S mice and 6 C mice used for microarray analysis differed significantly in terms of total duration of attacks H(1,11) = 8.6, p = 0.002 (one-way ANOVA on Ranks) (Fig. 2). In terms of sites of attack, no differences statistical differences were found between groups (data not shown). On average for both groups, 77% of attacks were to the back/flank or belly (considered offensive attacks) and 23% of attacks were to the head/neck region (considered defensive attacks).
Fig. 2.
Maternal aggression profile of the six C and six S mice used for microarray analysis in terms of total duration of attacks. ** = p < 0.01 (ANOVA on Ranks).
Gene expression in the preoptic area/hypothalamus
Using an intersection of genes showing the greatest significant differences for RMA and PLIER techniques we identified ∼200 genes with a mean (intersected) p value less than 0.019. That is, for 40,000 genes only ∼200 (or less than 0.5%) were identified as significant. Of those, the known genes are shown in Table 2. The full list of all 40,000 genes, their relative expression, and p-value ranking using both statistical techniques is presented in Supplemental Table 1. The genes that displayed significant differences between S and C mice were distributed across a number of categories (Table 2). The function/category of each gene was determined individually using PubMed and GenBank databases.
Real-time PCR analysis
Confirming the high-density oligonucleotide array results, we found that Kcna1, neurotensin, Nos1, and Npy2r were significantly altered in S relative to C mice (Fig. 2). For Crhbp, the differences between groups were just above significance (p = 0.051) and for Gabra1 there was a trend towards increased expression in S mice, but this did not reach significance.
Discussion
This study used high density oligonucleotide arrays in conjunction with an on-going selection study to identify genes in the CNS that may support maternal aggression. The portion of CNS examined (a continuous region including preoptic and hypothalamic regions) was chosen for examination because it had previously been implicated in the regulation of maternal aggression (see above). Some of genes identified are consistent with previous studies on maternal aggression using different approaches. This work also identified new candidate genes in the regulation of maternal aggression that can be examined in subsequent hypothesis directed studies.
Gene expression differences between S and C mice that could underlie aggression differences
Three neurotransmitter receptors exhibit differential expression in S mice and each could contribute to elevations in maternal aggression. The decrease in neuropeptide Y (NPY) receptor 2 (Npy2r) in S mice is interesting because the knockout of Npy2r results in decreased fear and anxiety (Redrobe et al. 2003; Tschenett et al. 2003) and decreased anxiety has been linked to elevated maternal aggression (Lonstein & Gammie 2002). NPY has anxiolytic effects (Heilig 2004; Karlsson et al. 2005) in addition to its role in regulating feeding behavior (Kalra & Kalra 2003). Because Npy2r is an autoreceptor, it is thought that antagonizing this receptor leads to elevated NPY release and hence decreased anxiety (Heilig 2004). The increase in adenosine A1 receptor (Adora1) in S mice is intriguing because deletion of this gene elevates anxiety in some tests (Gimenez-Llort et al. 2002; Lang et al. 2003). This would suggest that increases in S mice of this receptor could decrease anxiety and thereby elevate aggression. Neither Npy2r nor Adora1 has previously been implicated in the regulation of maternal aggression.
The increases in Gabra1 in S mice were not confirmed by real-time PCR, but high quality PCR probes could not be developed for the specific site of the Gabra1 gene (the distal end) identified by the Affymetrix probes as showing increased expression. The PCR probes used here were upstream of the target, but did not cover it. Increased GABAergic neurotransmission has been shown to facilitate maternal aggression (Hansen et al. 1985; Mos & Olivier 1989), so increased expression of a GABA receptor subunit would not be unexpected in the regulation of maternal aggression. In would be valuable in future work to examine whether the transcript identified by the Affymetrix probe is of biological relevance to maternal aggression or not.
Elevated CRF binding protein (Crhbp) in S mice (almost confirmed by PCR, p=0.051) is interesting because recent work has shown an inhibitory role for CRF (and related peptides) in maternal aggression (D'Anna et al. 2005; Gammie et al. 2004). CRF binding protein acts to blunt CRF action (Seasholtz et al. 2001) and mice missing this gene exhibit elevated anxiety (Karolyi et al. 1999). Thus, in S mice increased production of CRF binding protein could both decrease anxiety and elevate aggression by suppressing CRF action.
The elevation of neuronal nitric oxide (NO) synthase 1 (Nos1) (confirmed by real-time PCR) in S mice suggests increased production of the signaling molecule, NO, could facilitate maternal aggression. This result is consistent with previous work showing that deletion of Nos1 results in dramatic reductions in maternal aggression (Gammie & Nelson 1999) and that pharmacological disruption of NO production decreases maternal aggression in prairie voles (Gammie et al. 2000) and rats (Popeski & Woodside 2004). Additionally, increased production of Nos1 occurs during lactation (Popeski et al. 1999) and one possibility for this change is to support maternal aggression. Thus, increased expression of Nos1 in S mice may have contributed to elevated aggression in these mice.
Decreased expression of neurotensin in S mice is intriguing and somewhat unexpected. Neurotensin is known for its possible role in schizophrenia and action of antipsychotic drugs (Kinkead & Nemeroff 2006) as well as stress induced analgesia (Dobner 2005), but a possible role for this neuropeptide in maternal aggression has not previously been suggested. Neurotensin can modulate CRF activity (Rostene & Alexander 1997; Rowe et al. 1995), a known modulator of maternal aggression (Gammie et al. 2004), so neurotensin may alter aggression through this pathway.
Another unexpected finding was the elevation in S mice of 5 different genes that are part of K+ channel activation. The increase in Kcna1 in S mice was confirmed by real-time PCR. The loss of Kcna1 in mice causes elevated seizure-like activity (Smart et al. 1998), so elevated production of Kcna1 could act to dampen overexcitability. However, a clearer understanding of how changes in K+ conductance supports maternal aggression would require that the identity of the neurons containing these channels be determined before function could be properly tested.
The consistent increase in expression in S mice of genes involved in metabolism (24 out of 24) (Table 2) suggests that the S mice have an altered metabolism that could support increased aggressive output. Metabolism alters during the life-history of a number of animals and an increase in metabolism occurs during lactation in mice (as for other mammals) (Speakman et al. 2004). Thus, the ability to exhibit elevated maternal aggression in S mice may be bootstrapped in part to the ability to exhibit an elevation of metabolism.
The finding of elevated Fos and Egr1 in S mice is consistent with the elevated expression of metabolism genes described above. Further, increases in expression of both Fos and Egr1 occur with lactation and sensory input from pups (Li et al. 1999; Numan & Insel 2003; Numan & Numan 1994; Numan et al. 1998) and it is thought that this activity reflects increased neuronal activity that supports maternal care. One explanation for the elevation of both Fos and Egr1, then, is that baseline neuronal activity is higher in S mice and that this may support the ability to produce higher levels of maternal aggression.
As indicated above, S and C mice show differences in levels of aggression, but not in terms of sites of attacks on the male. The breakdown of sites of attacks in S and C mice seen here is similar to that found in a previous examination of these mice (Gammie et al. 2006). Traditionally, attacks to the back/flank region, including belly, in males, especially rats, has been termed offensive aggression, whereas attacks to the face/neck region have been termed defensive attacks (Blanchard & Blanchard 1981). Hence, maternal aggression contains elements of both forms of aggression. It is not clear to what extent any of the findings here may be relevant to male offensive aggression because both forms of aggression contain overlapping (Parmigiani et al. 1998) and differing (Del Punta et al. 2002; Gammie et al. 2005b; Gammie & Lonstein 2005; Gammie & Nelson 1999; Parmigiani et al. 1998) signaling components. For example, elevated Nos1 in S mice would likely not support intermale aggression because as indicated above NO is positively associated with maternal aggression, but negatively associated with intermale aggression (Demas et al. 1997; Nelson et al. 1995). For other genes, such as Crhbp and Npy2r, the change in expression in S mice would be expected to decrease anxiety and in some cases lower anxiety can alter offensive intermale aggression, for review, see (Blanchard & Blanchard 2005), so these gene changes could support enhanced intermale aggression. To date, we have not finished analysis of intermale aggression in S and C mice, but preliminary results indicate there are no overt differences in aggression between genotype (S.C. Gammie and S.A. Stevenson, unpublished observations). Whether or how gene expression changes found here relate to intermale aggression will have to be addressed in subsequent studies.
Methodological considerations
In this study, we chose to examine a continuous region of the CNS (that included both preoptic and hypothalamic regions) in order to observe gene expression difference in S versus C mice that could support altered aggressive output. As indicated above, this brain area was chosen for analysis because it contains brain regions previously implicated in the regulation of maternal aggression. Additional regions that support maternal aggression, including amygdale, were also collected, but have not been analyzed. These could provide further insights into the regulation of aggression. Although this dissection was focused on preoptic areas and a selected portion of hypothalamus, one drawback could be a dilution effect such that small RNA changes are more difficult to detect as the amount of sampled tissue increases. Another possible drawback is that if changes in gene expression occur in opposite directions within different subregions collected, then changes may cancel each other out. In other studies, array examinations of larger brain regions have proven to be useful. The WebQTL database maintained by the GeneNetwork, www.genenetwork.org, uses array analysis of large forebrain regions for detecting gene expression among recombinant inbred mouse strains and this database has already been used to make important biological insights (Scott et al. 2005). Further, using microarrays and a larger dissected region than used here, we recently confirmed a number of known changes in gene expression that occur with lactation (Gammie et al. 2005a).
In this study we used a brief test (4 min) immediately before tissue collection. Although it is possible that brief exposure to the intruder male differentially altered gene expression in S and C mice, we think this likely had minimal impact on our results for the following reasons. 1) The time-course for onset of expression differences of even the earliest responding genes to stimulus, such as Fos, is at least 10 minutes (Ginsberg et al. 2006) and brains were collected prior to that interval. 2) Many genes that show altered expression in response to stimulus occur in the hours long range, such as genes that responds to elevated glucocorticoids (Morsink et al. 2006), and the stimulus in this study is well short of that range. 3) Although the S mice showed on average 50 more seconds of aggression than the C mice, this still only represented ∼20% of the test time, so for the majority of the 4 min test mice from both groups were in similar non-fighting conditions.
As with any study examining just gene expression, it is not known to what extent mRNA differences are translated into functional protein that then contributes to phenotypic differences. Recent work suggests that in many cases, RNA alterations identified by gene arrays can be highly consistent with changes in protein expression (Kern et al. 2003) or show similarities with varying degrees of concordance (Bianchi et al. 2005; Cham et al. 2003; Li et al. 2004). For two of the genes identified by this study as having altered expression with selection, Nts and Crhbp, a good concordance of RNA levels with protein expression has been found (Chatzaki et al. 2002; Smits et al. 2004). Hypothesis directed studies based on information provided by this study along with examinations of protein expression, then, will be critical steps in understanding whether or how genes identified here contribute to maternal aggression behavior.
Because in this study we compared separated populations, the fixation of gene alleles due to random genetic drift could have contributed to some of our expression differences. However, we think the contributions from random genetic drift are low in this study for a few reasons. 1) The number of generations of separation between S and C populations was relatively low (5 generations of selection). 2) The technique of within-family selection we employed in this study was designed to maximize the effective population size, minimize inbreeding, and hence slow down random fixation (Swallow et al. 1998). 3) 26 breeders were used to maintain each S and C population for each generation (with overall population reaching on average 150 mice each generation) and larger population sizes decrease the rate of fixation (Falconer 1989). As a comparison, a study in Drosophila using 16 breeders per generation (and 117 different populations) found the first fixation of a given gene occurred at generation 4 and that was in only one of the 117 lines (Buri 1956). In computer simulations using a breeding population size of 40, fixation occurs for the first time only after 35 generations (Freeman & Herron 1998). Further, recent work indicates that for selected traits for which there is a strong difference from the non-selected controls (as for us with only a few generations of selection), that most correlated traits are likely associated with the selection itself and not genetic drift (Konarzewski et al. 2005). An important point for this caveat of possible genetic drift as well as the others described above, is that any gene identified in this study not be considered an end-point, but rather a new starting point for developing hypothesis directed studies aimed at understanding the genetic basis of maternal aggression.
Conclusions
In this study we examined gene expression differences between a line of mice selected for high maternal aggression relative to a non-selected control line. Using high density arrays, we were able to identify candidate genes that may regulate maternal aggression. A subset of the identified genes are consistent with work from previous studies using different approaches, but a new interesting set of candidate genes was also identified. One value of this study, then, was to use a unique mouse model to provide insights into the genetics of maternal aggression that can then be followed up with hypothesis directed studies.
Fig. 3.
Real-time PCR analysis of Kcna1, neurotensin, Nos1, Npy2r, Crhbp, and Gabra1 expression. Confirming array results, selection resulted in increased Kcna1 and Nos1 and decreased neurotensin and Npy2r mRNA levels relative to control mice. Increased expression of Crhbp in S mice was almost confirmed by PCR (p = 0.051). mRNA levels are expressed relative to the calibrator (see Methods for more details). * = p < 0.05, one-way ANOVA.
Acknowledgments
This work was supported by National Institutes of Health Grant R01MH066086 to S.C.G. and MH002035 to A.P.A. The authors wish to thank Kate Skogen and Jeff Alexander for animal care and Emily Bethea, Kelly Clinkenbeard, and Allen Irgens for technical assistance.
Supplementary Material
References
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