Abstract
We report a sensitive and rapid method for detection of hiochi bacteria by PCR. This method involves the electrophoresis of amplified DNA. Nucleotide sequences of the spacer region between 16S and 23S rRNA genes of 11 Lactobacillus strains were identified by analysis of PCR products. Five primers were designed by analysis of similarities among these sequences. A single cell of Lactobacillus casei subsp. casei could be detected when purified genomic DNA was used as the template. When various cell concentrations of L. casei subsp. casei were added to 50 ml of pasteurized sake and the cells were recovered, the detection limit was about one cell. No discrete band was observed in electrophoresis after PCR when human, Escherichia coli, mycoplasma, Acholeplasma, yeast, or mold DNA was used as the template.
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- Brosius J., Dull T. J., Sleeter D. D., Noller H. F. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol. 1981 May 15;148(2):107–127. doi: 10.1016/0022-2836(81)90508-8. [DOI] [PubMed] [Google Scholar]
- Green C. J., Stewart G. C., Hollis M. A., Vold B. S., Bott K. F. Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rrnB. Gene. 1985;37(1-3):261–266. doi: 10.1016/0378-1119(85)90281-1. [DOI] [PubMed] [Google Scholar]
- Iwami M., Muto A., Yamao F., Osawa S. Nucleotide sequence of the rrnB 16S ribosomal RNA gene from Mycoplasma capricolum. Mol Gen Genet. 1984;196(2):317–322. doi: 10.1007/BF00328065. [DOI] [PubMed] [Google Scholar]
- Leffers H., Garrett R. A. The nucleotide sequence of the 16S ribosomal RNA gene of the archaebacterium Halococcus morrhua. EMBO J. 1984 Jul;3(7):1613–1619. doi: 10.1002/j.1460-2075.1984.tb02019.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Loughney K., Lund E., Dahlberg J. E. tRNA genes are found between 16S and 23S rRNA genes in Bacillus subtilis. Nucleic Acids Res. 1982 Mar 11;10(5):1607–1624. doi: 10.1093/nar/10.5.1607. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Murzina N. V., Vorozheykina D. P., Matvienko N. I. Nucleotide sequence of Thermus thermophilus HB8 gene coding 16S rRNA. Nucleic Acids Res. 1988 Aug 25;16(16):8172–8172. doi: 10.1093/nar/16.16.8172. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ogasawara N., Moriya S., Yoshikawa H. Structure and organization of rRNA operons in the region of the replication origin of the Bacillus subtilis chromosome. Nucleic Acids Res. 1983 Sep 24;11(18):6301–6318. doi: 10.1093/nar/11.18.6301. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sanger F. Determination of nucleotide sequences in DNA. Science. 1981 Dec 11;214(4526):1205–1210. doi: 10.1126/science.7302589. [DOI] [PubMed] [Google Scholar]
- Suzuki Y., Nagata A., Ono Y., Yamada T. Complete nucleotide sequence of the 16S rRNA gene of Mycobacterium bovis BCG. J Bacteriol. 1988 Jun;170(6):2886–2889. doi: 10.1128/jb.170.6.2886-2889.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Suzuki Y., Yamada T. The nucleotide sequence of 16S rRNA gene from Streptomyces lividans TK21. Nucleic Acids Res. 1988 Jan 11;16(1):370–370. doi: 10.1093/nar/16.1.370. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tamura G., Ando K., Kodama K., Arima K. Production of mevalonic acid by fermentation. Appl Microbiol. 1968 Jul;16(7):965–972. doi: 10.1128/am.16.7.965-972.1968. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Toschka H. Y., Höpfl P., Ludwig W., Schleifer K. H., Ulbrich N., Erdmann V. A. Complete nucleotide sequence of a 16S ribosomal RNA gene from Pseudomonas aeruginosa. Nucleic Acids Res. 1988 Mar 25;16(5):2348–2348. doi: 10.1093/nar/16.5.2348. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Weisburg W. G., Oyaizu Y., Oyaizu H., Woese C. R. Natural relationship between bacteroides and flavobacteria. J Bacteriol. 1985 Oct;164(1):230–236. doi: 10.1128/jb.164.1.230-236.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Woese C. R., Debrunner-Vossbrinck B. A., Oyaizu H., Stackebrandt E., Ludwig W. Gram-positive bacteria: possible photosynthetic ancestry. Science. 1985;229:762–765. doi: 10.1126/science.11539659. [DOI] [PubMed] [Google Scholar]