Skip to main content
Journal of Bacteriology logoLink to Journal of Bacteriology
. 1994 May;176(9):2492–2501. doi: 10.1128/jb.176.9.2492-2501.1994

The fas operon of Rhodococcus fascians encodes new genes required for efficient fasciation of host plants.

M Crespi 1, D Vereecke 1, W Temmerman 1, M Van Montagu 1, J Desomer 1
PMCID: PMC205384  PMID: 8169198

Abstract

Three virulence loci (fas, att, and hyp) of Rhodococcus fascians D188 have been identified on a 200-kb conjugative linear plasmid (pFiD188). The fas locus was delimited to a 6.5-kb DNA fragment by insertion mutagenesis, single homologous disruptive recombination, and in trans complementation of different avirulent insertion mutants. The locus is arranged as a large operon containing six open reading frames whose expression is specifically induced during the interaction with host plants. One predicted protein is homologous to P-450 cytochromes from actinomycetes. The putative ferredoxin component is of a novel type containing additional domains homologous to transketolases from chemoautotrophic, photosynthetic, and methylotrophic microorganisms. Genetic analysis revealed that fas encodes, in addition to the previously identified ipt, at least two new genes that are involved in fasciation development, one of which is only required on older tobacco plants.

Full text

PDF
2492

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Akiyoshi D. E., Regier D. A., Gordon M. P. Cytokinin production by Agrobacterium and Pseudomonas spp. J Bacteriol. 1987 Sep;169(9):4242–4248. doi: 10.1128/jb.169.9.4242-4248.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bradford M. M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 1976 May 7;72:248–254. doi: 10.1006/abio.1976.9999. [DOI] [PubMed] [Google Scholar]
  3. Brutlag D. L., Dautricourt J. P., Maulik S., Relph J. Improved sensitivity of biological sequence database searches. Comput Appl Biosci. 1990 Jul;6(3):237–245. doi: 10.1093/bioinformatics/6.3.237. [DOI] [PubMed] [Google Scholar]
  4. Casadaban M. J., Cohen S. N. Analysis of gene control signals by DNA fusion and cloning in Escherichia coli. J Mol Biol. 1980 Apr;138(2):179–207. doi: 10.1016/0022-2836(80)90283-1. [DOI] [PubMed] [Google Scholar]
  5. Chen J. H., Gibson J. L., McCue L. A., Tabita F. R. Identification, expression, and deduced primary structure of transketolase and other enzymes encoded within the form II CO2 fixation operon of Rhodobacter sphaeroides. J Biol Chem. 1991 Oct 25;266(30):20447–20452. [PubMed] [Google Scholar]
  6. Crespi M., Messens E., Caplan A. B., van Montagu M., Desomer J. Fasciation induction by the phytopathogen Rhodococcus fascians depends upon a linear plasmid encoding a cytokinin synthase gene. EMBO J. 1992 Mar;11(3):795–804. doi: 10.1002/j.1460-2075.1992.tb05116.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Desomer J., Crespi M., Van Montagu M. Illegitimate integration of non-replicative vectors in the genome of Rhodococcus fascians upon electrotransformation as an insertional mutagenesis system. Mol Microbiol. 1991 Sep;5(9):2115–2124. doi: 10.1111/j.1365-2958.1991.tb02141.x. [DOI] [PubMed] [Google Scholar]
  8. Desomer J., Dhaese P., Montagu M. V. Transformation of Rhodococcus fascians by High-Voltage Electroporation and Development of R. fascians Cloning Vectors. Appl Environ Microbiol. 1990 Sep;56(9):2818–2825. doi: 10.1128/aem.56.9.2818-2825.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Desomer J., Dhaese P., Van Montagu M. Conjugative transfer of cadmium resistance plasmids in Rhodococcus fascians strains. J Bacteriol. 1988 May;170(5):2401–2405. doi: 10.1128/jb.170.5.2401-2405.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Desomer J., Vereecke D., Crespi M., Van Montagu M. The plasmid-encoded chloramphenicol-resistance protein of Rhodococcus fascians is homologous to the transmembrane tetracycline efflux proteins. Mol Microbiol. 1992 Aug;6(16):2377–2385. doi: 10.1111/j.1365-2958.1992.tb01412.x. [DOI] [PubMed] [Google Scholar]
  11. Fisher R. F., Long S. R. Rhizobium--plant signal exchange. Nature. 1992 Jun 25;357(6380):655–660. doi: 10.1038/357655a0. [DOI] [PubMed] [Google Scholar]
  12. Gilligan P. H. Microbiology of airway disease in patients with cystic fibrosis. Clin Microbiol Rev. 1991 Jan;4(1):35–51. doi: 10.1128/cmr.4.1.35. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Haydock S. F., Dowson J. A., Dhillon N., Roberts G. A., Cortes J., Leadlay P. F. Cloning and sequence analysis of genes involved in erythromycin biosynthesis in Saccharopolyspora erythraea: sequence similarities between EryG and a family of S-adenosylmethionine-dependent methyltransferases. Mol Gen Genet. 1991 Nov;230(1-2):120–128. doi: 10.1007/BF00290659. [DOI] [PubMed] [Google Scholar]
  14. Hoitink C. W., Woudt L. P., Turenhout J. C., van de Kamp M., Canters G. W. Isolation and sequencing of the Alcaligenes denitrificans azurin-encoding gene: comparison with the genes encoding blue copper proteins from Pseudomonas aeruginosa and Alcaligenes faecalis. Gene. 1990 May 31;90(1):15–20. doi: 10.1016/0378-1119(90)90434-s. [DOI] [PubMed] [Google Scholar]
  15. Horii M., Ishizaki T., Paik S. Y., Manome T., Murooka Y. An operon containing the genes for cholesterol oxidase and a cytochrome P-450-like protein from a Streptomyces sp. J Bacteriol. 1990 Jul;172(7):3644–3653. doi: 10.1128/jb.172.7.3644-3653.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Janowicz Z. A., Eckart M. R., Drewke C., Roggenkamp R. O., Hollenberg C. P., Maat J., Ledeboer A. M., Visser C., Verrips C. T. Cloning and characterization of the DAS gene encoding the major methanol assimilatory enzyme from the methylotrophic yeast Hansenula polymorpha. Nucleic Acids Res. 1985 May 10;13(9):3043–3062. doi: 10.1093/nar/13.9.3043. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Jefferson R. A., Burgess S. M., Hirsh D. beta-Glucuronidase from Escherichia coli as a gene-fusion marker. Proc Natl Acad Sci U S A. 1986 Nov;83(22):8447–8451. doi: 10.1073/pnas.83.22.8447. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Kanemoto R. H., Powell A. T., Akiyoshi D. E., Regier D. A., Kerstetter R. A., Nester E. W., Hawes M. C., Gordon M. P. Nucleotide sequence and analysis of the plant-inducible locus pinF from Agrobacterium tumefaciens. J Bacteriol. 1989 May;171(5):2506–2512. doi: 10.1128/jb.171.5.2506-2512.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Klämbt D., Thies G., Skoog F. Isolation of cytokinins from Corynebacterium fascians. Proc Natl Acad Sci U S A. 1966 Jul;56(1):52–59. doi: 10.1073/pnas.56.1.52. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Kossmann J., Klintworth R., Bowien B. Sequence analysis of the chromosomal and plasmid genes encoding phosphoribulokinase from Alcaligenes eutrophus. Gene. 1989 Dec 21;85(1):247–252. doi: 10.1016/0378-1119(89)90490-3. [DOI] [PubMed] [Google Scholar]
  21. Matthews D. E., Van Etten H. D. Detoxification of the phytoalexin pisatin by a fungal cytochrome P-450. Arch Biochem Biophys. 1983 Jul 15;224(2):494–505. doi: 10.1016/0003-9861(83)90237-0. [DOI] [PubMed] [Google Scholar]
  22. Murai N., Skoog F., Doyle M. E., Hanson R. S. Relationships between cytokinin production, presence of plasmids, and fasciation caused by strains of Corynebacterium fascians. Proc Natl Acad Sci U S A. 1980 Jan;77(1):619–623. doi: 10.1073/pnas.77.1.619. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. O'Donnell M. J., Rowe B. R., Lawson N., Horton A., Gyde O. H., Barnett A. H. Placebo-controlled trial of lisinopril in normotensive diabetic patients with incipient nephropathy. J Hum Hypertens. 1993 Aug;7(4):327–332. [PubMed] [Google Scholar]
  24. O'Keefe D. P., Gibson K. J., Emptage M. H., Lenstra R., Romesser J. A., Litle P. J., Omer C. A. Ferredoxins from two sulfonylurea herbicide monooxygenase systems in Streptomyces griseolus. Biochemistry. 1991 Jan 15;30(2):447–455. doi: 10.1021/bi00216a021. [DOI] [PubMed] [Google Scholar]
  25. O'Keefe D. P., Harder P. A. Occurrence and biological function of cytochrome P450 monooxygenases in the actinomycetes. Mol Microbiol. 1991 Sep;5(9):2099–2105. doi: 10.1111/j.1365-2958.1991.tb02139.x. [DOI] [PubMed] [Google Scholar]
  26. Omer C. A., Lenstra R., Litle P. J., Dean C., Tepperman J. M., Leto K. J., Romesser J. A., O'Keefe D. P. Genes for two herbicide-inducible cytochromes P-450 from Streptomyces griseolus. J Bacteriol. 1990 Jun;172(6):3335–3345. doi: 10.1128/jb.172.6.3335-3345.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Peleman J., Boerjan W., Engler G., Seurinck J., Botterman J., Alliotte T., Van Montagu M., Inzé D. Strong cellular preference in the expression of a housekeeping gene of Arabidopsis thaliana encoding S-adenosylmethionine synthetase. Plant Cell. 1989 Jan;1(1):81–93. doi: 10.1105/tpc.1.1.81. [DOI] [PMC free article] [PubMed] [Google Scholar]
  28. Scarbrough E., Armstrong D. J., Skoog F., Frihart C. R., Leonard N. J. Isolation of cis-Zeatin from Corynebacterium fascians Cultures. Proc Natl Acad Sci U S A. 1973 Dec;70(12 Pt 1-2):3825–3829. doi: 10.1073/pnas.70.12.3825. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Shimoda N., Toyoda-Yamamoto A., Nagamine J., Usami S., Katayama M., Sakagami Y., Machida Y. Control of expression of Agrobacterium vir genes by synergistic actions of phenolic signal molecules and monosaccharides. Proc Natl Acad Sci U S A. 1990 Sep;87(17):6684–6688. doi: 10.1073/pnas.87.17.6684. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Stassi D., Donadio S., Staver M. J., Katz L. Identification of a Saccharopolyspora erythraea gene required for the final hydroxylation step in erythromycin biosynthesis. J Bacteriol. 1993 Jan;175(1):182–189. doi: 10.1128/jb.175.1.182-189.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Trower M. K., Lenstra R., Omer C., Buchholz S. E., Sariaslani F. S. Cloning, nucleotide sequence determination and expression of the genes encoding cytochrome P-450soy (soyC) and ferredoxinsoy (soyB) from Streptomyces griseus. Mol Microbiol. 1992 Aug;6(15):2125–2134. doi: 10.1111/j.1365-2958.1992.tb01386.x. [DOI] [PubMed] [Google Scholar]
  32. Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. doi: 10.1016/0378-1119(85)90120-9. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Bacteriology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES