Abstract
Isopropylbenzene-degrading bacteria, including Pseudomonas putida RE204, transform benzothiophene to a mixture of compounds. Induced strain RE204 and a number of its Tn5 mutant derivatives were used to accumulate these compounds and their precursors from benzothiophene. These metabolites were subsequently identified by 1H and 13C nuclear magnetic resonance spectroscopy and gas chromatography-mass spectrometry. When strain RE204 was incubated with benzothiophene, it produced a bright yellow compound, identified as trans-4-[3-hydroxy-2-thienyl]-2-oxobut-3-enoate, formed by the rearrangement of cis-4-(3-keto-2,3-dihydrothienyl)-2-hydroxybuta-2,4-dieno ate, the product of 3-isopropylcatechol-2,3-dioxygenase-catalyzed ring cleavage of 4,5-dihydroxybenzothiophene, as well as 2-mercaptophenylglyoxalate and 2'-mercaptomandelaldehyde. A dihydrodiol dehydrogenase-deficient mutant, strain RE213, converted benzothiophene to cis-4,5-dihydroxy-4,5-dihydrobenzothiophene and 2'-mercaptomandelaldehyde; neither trans-4-[3-hydroxy-2-thienyl]-2-oxobut-3-enoate nor 2-mercaptophenylglyoxalate was detected. Cell extracts of strain RE204 catalyzed the conversion of cis-4,5-dihydroxy-4,5-dihydrobenzothiophene to trans-4-[3-hydroxy-2-thienyl]-2-oxobut-3-enoate in the presence of NAD+. Under the same conditions, extracts of the 3-isopropylcatechol-2,3-dioxygenase-deficient mutant RE215 acted on cis-4,5-dihydroxy-4,5-dihydrobenzothiophene, forming 4,5-dihydroxybenzothiophene. These data indicate that oxidation of benzothiophene by strain RE204 is initiated at either ring. Transformation initiated at the 4,5 position on the benzene ring proceeds by three enzyme-catalyzed reactions through ring cleavage. The sequence of events that occurs following attack at the 2,3 position of the thiophene ring is less clear, but it is proposed that 2,3 dioxygenation yields a product that is both a cis-dihydrodiol and a thiohemiacetal, which as a result of this structure undergoes two competing reactions: either spontaneous opening of the ring, yielding 2'-mercaptomandelaldehyde, or oxidation by the dihydrodiol dehydrogenase to another thiohemiacetal, 2-hydroxy-3-oxo-2,3-dihydrobenzothiophene, which is not a substrate for the ring cleavage dioxygenase but which spontaneously opens to form 2-mercaptophenylglyoxaldehyde and subsequently 2-mercaptophenylglyoxalate. The yellow product, trans-4-[3-hydroxy-2-thienyl]-2-oxobut-3-enoate, is a structural analog of trans-o-hydroxybenzylidenepyruvate, an intermediate of the naphthalene catabolic pathway; extracts of recombinant bacteria containing trans-o-hydroxybenzylidenepyruvate hydratase-aldolase catalyzed the conversion of trans-4-[3-hydroxy-2-thienyl]-2-oxobut-3-enoate to 3-hydroxythiophene-2-carboxaldehyde, which could then be further acted on, in the presence of NAD+, by extracts of recombinant bacteria containing the subsequent enzyme of the naphthalene pathway, salicylaldehyde dehydrogenase.
Full text
PDF










Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Amphlett M. J., Callely A. G. The degradation of 2-thiophenecarboxylic acid by a Flavobacterium species. Biochem J. 1969 Mar;112(1):12P–13P. doi: 10.1042/bj1120012pb. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bohonos N., Chou T. W., Spanggord R. J. Some observations on biodegradation of pollutants in aquatic systems. Jpn J Antibiot. 1977 Dec;30 (Suppl):275–285. [PubMed] [Google Scholar]
- Cripps R. E. The microbial metabolism of thiophen-2-carboxylate. Biochem J. 1973 Jun;134(2):353–366. doi: 10.1042/bj1340353. [DOI] [PMC free article] [PubMed] [Google Scholar]
- DeFrank J. J., Ribbons D. W. p-cymene pathway in Pseudomonas putida: initial reactions. J Bacteriol. 1977 Mar;129(3):1356–1364. doi: 10.1128/jb.129.3.1356-1364.1977. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eaton R. W., Chapman P. J. Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydroxynaphthalene and subsequent reactions. J Bacteriol. 1992 Dec;174(23):7542–7554. doi: 10.1128/jb.174.23.7542-7554.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eaton R. W., Ribbons D. W. Biotransformation of 3-methylphthalate by Micrococcus sp. strain 12B. J Gen Microbiol. 1987 Sep;133(9):2473–2476. doi: 10.1099/00221287-133-9-2473. [DOI] [PubMed] [Google Scholar]
- Eaton R. W., Ribbons D. W. Metabolism of dibutylphthalate and phthalate by Micrococcus sp. strain 12B. J Bacteriol. 1982 Jul;151(1):48–57. doi: 10.1128/jb.151.1.48-57.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eaton R. W., Timmis K. N. Characterization of a plasmid-specified pathway for catabolism of isopropylbenzene in Pseudomonas putida RE204. J Bacteriol. 1986 Oct;168(1):123–131. doi: 10.1128/jb.168.1.123-131.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Evans J. S., Venables W. A. Degradation of thiophene-2-carboxylate, furan-2-carboxylate, pyrrole-2-carboxylate and other thiophene derivatives by the bacterium Vibrio YC1. Appl Microbiol Biotechnol. 1990 Mar;32(6):715–720. doi: 10.1007/BF00164747. [DOI] [PubMed] [Google Scholar]
- Fedorak P. M., Grbić-Galić D. Aerobic microbial cometabolism of benzothiophene and 3-methylbenzothiophene. Appl Environ Microbiol. 1991 Apr;57(4):932–940. doi: 10.1128/aem.57.4.932-940.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fortnagel P., Harms H., Wittich R. M., Krohn S., Meyer H., Sinnwell V., Wilkes H., Francke W. Metabolism of Dibenzofuran by Pseudomonas sp. Strain HH69 and the Mixed Culture HH27. Appl Environ Microbiol. 1990 Apr;56(4):1148–1156. doi: 10.1128/aem.56.4.1148-1156.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Janson J. C. Adsorption phenomena on Sephadex. J Chromatogr. 1967 May;28(1):12–20. doi: 10.1016/s0021-9673(01)85920-3. [DOI] [PubMed] [Google Scholar]
- Jerina D. M., Daly J. W., Jeffrey A. M., Gibson D. T. Cis-1,2-dihydroxy-1,2-dihydronaphthalene: a bacterial metabolite from naphthalene. Arch Biochem Biophys. 1971 Jan;142(1):394–396. doi: 10.1016/0003-9861(71)90298-0. [DOI] [PubMed] [Google Scholar]
- Mueller J. G., Middaugh D. P., Lantz S. E., Chapman P. J. Biodegradation of creosote and pentachlorophenol in contaminated groundwater: chemical and biological assessment. Appl Environ Microbiol. 1991 May;57(5):1277–1285. doi: 10.1128/aem.57.5.1277-1285.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sagardía F., Rigau J. J., Martínez-Lahoz A., Fuentes F., López C., Flores W. Degradation of benzothiophene and related compounds by a soil Pseudomonas in an oil-aqueous environment. Appl Microbiol. 1975 Jun;29(6):722–725. doi: 10.1128/am.29.6.722-725.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. doi: 10.1016/0378-1119(85)90120-9. [DOI] [PubMed] [Google Scholar]
