Abstract
Tryptophan auxotrophs of the archaebacterium Haloferax volcanii define a cluster of overlapping genes homologous to eubacterial-eukaryotic trpD, -F, -E, and -G, linked in that order and each preceded by a possible ribosome binding site. Residues involved in feedback inhibition of eubacterial anthranilate synthetases are conserved.
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Selected References
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- Caligiuri M. G., Bauerle R. Identification of amino acid residues involved in feedback regulation of the anthranilate synthase complex from Salmonella typhimurium. Evidence for an amino-terminal regulatory site. J Biol Chem. 1991 May 5;266(13):8328–8335. [PubMed] [Google Scholar]
- Charlebois R. L., Schalkwyk L. C., Hofman J. D., Doolittle W. F. Detailed physical map and set of overlapping clones covering the genome of the archaebacterium Haloferax volcanii DS2. J Mol Biol. 1991 Dec 5;222(3):509–524. doi: 10.1016/0022-2836(91)90493-p. [DOI] [PubMed] [Google Scholar]
- Conover R. K., Doolittle W. F. Characterization of a gene involved in histidine biosynthesis in Halobacterium (Haloferax) volcanii: isolation and rapid mapping by transformation of an auxotroph with cosmid DNA. J Bacteriol. 1990 Jun;172(6):3244–3249. doi: 10.1128/jb.172.6.3244-3249.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Corpet F. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 1988 Nov 25;16(22):10881–10890. doi: 10.1093/nar/16.22.10881. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Crawford I. P. Evolution of a biosynthetic pathway: the tryptophan paradigm. Annu Rev Microbiol. 1989;43:567–600. doi: 10.1146/annurev.mi.43.100189.003031. [DOI] [PubMed] [Google Scholar]
- Eisenberg H., Wachtel E. J. Structural studies of halophilic proteins, ribosomes, and organelles of bacteria adapted to extreme salt concentrations. Annu Rev Biophys Biophys Chem. 1987;16:69–92. doi: 10.1146/annurev.bb.16.060187.000441. [DOI] [PubMed] [Google Scholar]
- Essar D. W., Eberly L., Hadero A., Crawford I. P. Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications. J Bacteriol. 1990 Feb;172(2):884–900. doi: 10.1128/jb.172.2.884-900.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Essar D. W., Eberly L., Han C. Y., Crawford I. P. DNA sequences and characterization of four early genes of the tryptophan pathway in Pseudomonas aeruginosa. J Bacteriol. 1990 Feb;172(2):853–866. doi: 10.1128/jb.172.2.853-866.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Goncharoff P., Nichols B. P. Nucleotide sequence of Escherichia coli pabB indicates a common evolutionary origin of p-aminobenzoate synthetase and anthranilate synthetase. J Bacteriol. 1984 Jul;159(1):57–62. doi: 10.1128/jb.159.1.57-62.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gropp F., Palm P., Zillig W. Expression and regulation of Halobacterium halobium phage phi H genes. Can J Microbiol. 1989 Jan;35(1):182–188. doi: 10.1139/m89-028. [DOI] [PubMed] [Google Scholar]
- Gupta R., Lanter J. M., Woese C. R. Sequence of the 16S Ribosomal RNA from Halobacterium volcanii, an Archaebacterium. Science. 1983 Aug 12;221(4611):656–659. doi: 10.1126/science.221.4611.656. [DOI] [PubMed] [Google Scholar]
- Henikoff S. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene. 1984 Jun;28(3):351–359. doi: 10.1016/0378-1119(84)90153-7. [DOI] [PubMed] [Google Scholar]
- Hütter R., Niederberger P., DeMoss J. A. Tryptophan biosynthetic genes in eukaryotic microorganisms. Annu Rev Microbiol. 1986;40:55–77. doi: 10.1146/annurev.mi.40.100186.000415. [DOI] [PubMed] [Google Scholar]
- Lam W. L., Cohen A., Tsouluhas D., Doolittle W. F. Genes for tryptophan biosynthesis in the archaebacterium Haloferax volcanii. Proc Natl Acad Sci U S A. 1990 Sep;87(17):6614–6618. doi: 10.1073/pnas.87.17.6614. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lam W. L., Doolittle W. F. Shuttle vectors for the archaebacterium Halobacterium volcanii. Proc Natl Acad Sci U S A. 1989 Jul;86(14):5478–5482. doi: 10.1073/pnas.86.14.5478. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Matsui K., Miwa K., Sano K. Two single-base-pair substitutions causing desensitization to tryptophan feedback inhibition of anthranilate synthase and enhanced expression of tryptophan genes of Brevibacterium lactofermentum. J Bacteriol. 1987 Nov;169(11):5330–5332. doi: 10.1128/jb.169.11.5330-5332.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Meile L., Stettler R., Banholzer R., Kotik M., Leisinger T. Tryptophan gene cluster of Methanobacterium thermoautotrophicum Marburg: molecular cloning and nucleotide sequence of a putative trpEGCFBAD operon. J Bacteriol. 1991 Aug;173(16):5017–5023. doi: 10.1128/jb.173.16.5017-5023.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Messing J. New M13 vectors for cloning. Methods Enzymol. 1983;101:20–78. doi: 10.1016/0076-6879(83)01005-8. [DOI] [PubMed] [Google Scholar]
- Pearson W. R., Lipman D. J. Improved tools for biological sequence comparison. Proc Natl Acad Sci U S A. 1988 Apr;85(8):2444–2448. doi: 10.1073/pnas.85.8.2444. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Priestle J. P., Grütter M. G., White J. L., Vincent M. G., Kania M., Wilson E., Jardetzky T. S., Kirschner K., Jansonius J. N. Three-dimensional structure of the bifunctional enzyme N-(5'-phosphoribosyl)anthranilate isomerase-indole-3-glycerol-phosphate synthase from Escherichia coli. Proc Natl Acad Sci U S A. 1987 Aug;84(16):5690–5694. doi: 10.1073/pnas.84.16.5690. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Reiter W. D., Hüdepohl U., Zillig W. Mutational analysis of an archaebacterial promoter: essential role of a TATA box for transcription efficiency and start-site selection in vitro. Proc Natl Acad Sci U S A. 1990 Dec;87(24):9509–9513. doi: 10.1073/pnas.87.24.9509. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zaccai G., Eisenberg H. Halophilic proteins and the influence of solvent on protein stabilization. Trends Biochem Sci. 1990 Sep;15(9):333–337. doi: 10.1016/0968-0004(90)90068-m. [DOI] [PubMed] [Google Scholar]
- Zillig W., Palm P., Reiter W. D., Gropp F., Pühler G., Klenk H. P. Comparative evaluation of gene expression in archaebacteria. Eur J Biochem. 1988 May 2;173(3):473–482. doi: 10.1111/j.1432-1033.1988.tb14023.x. [DOI] [PubMed] [Google Scholar]