Skip to main content
British Journal of Cancer logoLink to British Journal of Cancer
. 1996 Aug;74(4):508–512. doi: 10.1038/bjc.1996.394

Variation in topoisomerase I gene copy number as a mechanism for intrinsic drug sensitivity.

H L McLeod 1, W N Keith 1
PMCID: PMC2074660  PMID: 8761363

Abstract

DNA topoisomerase I (topo I) is the principle target for camptothecin and its derivatives such as SN38. Levels of topo I expression vary widely between and within tumour types and the basis for this is poorly understood. We have used fluorescence in situ hybridisation to detect the topo I locus in a panel of breast and colon cancer cell lines. This approach has identified a range of topo I gene copies from 1 to 6 between the cell lines as a result of DNA amplification, polysomy and isochromosome formation. Topo I gene copy number was highly correlated with topo I expression, (rs = 0.92), and inversely correlated to sensitivity to a 1 h exposure to SN38 (rs = -0.904). This illustrates the significant impact of altered topo I gene copy number on intrinsic drug sensitivity and influences potential mechanisms for acquisition of drug resistance.

Full text

PDF
508

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Coutts J., Plumb J. A., Brown R., Keith W. N. Expression of topoisomerase II alpha and beta in an adenocarcinoma cell line carrying amplified topoisomerase II alpha and retinoic acid receptor alpha genes. Br J Cancer. 1993 Oct;68(4):793–800. doi: 10.1038/bjc.1993.430. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Devilee P., van Vliet M., van Sloun P., Kuipers Dijkshoorn N., Hermans J., Pearson P. L., Cornelisse C. J. Allelotype of human breast carcinoma: a second major site for loss of heterozygosity is on chromosome 6q. Oncogene. 1991 Sep;6(9):1705–1711. [PubMed] [Google Scholar]
  3. Husain I., Mohler J. L., Seigler H. F., Besterman J. M. Elevation of topoisomerase I messenger RNA, protein, and catalytic activity in human tumors: demonstration of tumor-type specificity and implications for cancer chemotherapy. Cancer Res. 1994 Jan 15;54(2):539–546. [PubMed] [Google Scholar]
  4. Juan C. C., Hwang J. L., Liu A. A., Whang-Peng J., Knutsen T., Huebner K., Croce C. M., Zhang H., Wang J. C., Liu L. F. Human DNA topoisomerase I is encoded by a single-copy gene that maps to chromosome region 20q12-13.2. Proc Natl Acad Sci U S A. 1988 Dec;85(23):8910–8913. doi: 10.1073/pnas.85.23.8910. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Kallioniemi A., Kallioniemi O. P., Piper J., Tanner M., Stokke T., Chen L., Smith H. S., Pinkel D., Gray J. W., Waldman F. M. Detection and mapping of amplified DNA sequences in breast cancer by comparative genomic hybridization. Proc Natl Acad Sci U S A. 1994 Mar 15;91(6):2156–2160. doi: 10.1073/pnas.91.6.2156. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Keith W. N., Douglas F., Wishart G. C., McCallum H. M., George W. D., Kaye S. B., Brown R. Co-amplification of erbB2, topoisomerase II alpha and retinoic acid receptor alpha genes in breast cancer and allelic loss at topoisomerase I on chromosome 20. Eur J Cancer. 1993;29A(10):1469–1475. doi: 10.1016/0959-8049(93)90022-8. [DOI] [PubMed] [Google Scholar]
  7. Kunze N., Yang G. C., Dölberg M., Sundarp R., Knippers R., Richter A. Structure of the human type I DNA topoisomerase gene. J Biol Chem. 1991 May 25;266(15):9610–9616. [PubMed] [Google Scholar]
  8. Kunze N., Yang G. C., Jiang Z. Y., Hameister H., Adolph S., Wiedorn K. H., Richter A., Knippers R. Localization of the active type I DNA topoisomerase gene on human chromosome 20q11.2-13.1, and two pseudogenes on chromosomes 1q23-24 and 22q11.2-13.1. Hum Genet. 1989 Dec;84(1):6–10. doi: 10.1007/BF00210661. [DOI] [PubMed] [Google Scholar]
  9. Lee M. P., Brown S. D., Chen A., Hsieh T. S. DNA topoisomerase I is essential in Drosophila melanogaster. Proc Natl Acad Sci U S A. 1993 Jul 15;90(14):6656–6660. doi: 10.1073/pnas.90.14.6656. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Lichter P., Tang C. J., Call K., Hermanson G., Evans G. A., Housman D., Ward D. C. High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones. Science. 1990 Jan 5;247(4938):64–69. doi: 10.1126/science.2294592. [DOI] [PubMed] [Google Scholar]
  11. Mascio L. N., Verbeek P. W., Sudar D., Kuo W. L., Gray J. W. Semiautomated DNA probe mapping using digital imaging microscopy: I. System development. Cytometry. 1995 Jan 1;19(1):51–59. doi: 10.1002/cyto.990190107. [DOI] [PubMed] [Google Scholar]
  12. McLeod H. L., Douglas F., Oates M., Symonds R. P., Prakash D., van der Zee A. G., Kaye S. B., Brown R., Keith W. N. Topoisomerase I and II activity in human breast, cervix, lung and colon cancer. Int J Cancer. 1994 Dec 1;59(5):607–611. doi: 10.1002/ijc.2910590506. [DOI] [PubMed] [Google Scholar]
  13. Mertens F., Johansson B., Mitelman F. Isochromosomes in neoplasia. Genes Chromosomes Cancer. 1994 Aug;10(4):221–230. doi: 10.1002/gcc.2870100402. [DOI] [PubMed] [Google Scholar]
  14. Murphy D. S., McHardy P., Coutts J., Mallon E. A., George W. D., Kaye S. B., Brown R., Keith W. N. Interphase cytogenetic analysis of erbB2 and topoII alpha co-amplification in invasive breast cancer and polysomy of chromosome 17 in ductal carcinoma in situ. Int J Cancer. 1995 Feb 20;64(1):18–26. doi: 10.1002/ijc.2910640106. [DOI] [PubMed] [Google Scholar]
  15. Plumb J. A., Milroy R., Kaye S. B. Effects of the pH dependence of 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide-formazan absorption on chemosensitivity determined by a novel tetrazolium-based assay. Cancer Res. 1989 Aug 15;49(16):4435–4440. [PubMed] [Google Scholar]
  16. Pommier Y., Leteurtre F., Fesen M. R., Fujimori A., Bertrand R., Solary E., Kohlhagen G., Kohn K. W. Cellular determinants of sensitivity and resistance to DNA topoisomerase inhibitors. Cancer Invest. 1994;12(5):530–542. doi: 10.3109/07357909409021413. [DOI] [PubMed] [Google Scholar]
  17. Potmesil M. Camptothecins: from bench research to hospital wards. Cancer Res. 1994 Mar 15;54(6):1431–1439. [PubMed] [Google Scholar]
  18. Sakamoto M., Pinkel D., Mascio L., Sudar D., Peters D., Kuo W. L., Yamakawa K., Nakamura Y., Drabkin H., Jericevic Z. Semiautomated DNA probe mapping using digital imaging microscopy: II. System performance. Cytometry. 1995 Jan 1;19(1):60–69. doi: 10.1002/cyto.990190108. [DOI] [PubMed] [Google Scholar]
  19. Slichenmyer W. J., Rowinsky E. K., Donehower R. C., Kaufmann S. H. The current status of camptothecin analogues as antitumor agents. J Natl Cancer Inst. 1993 Feb 17;85(4):271–291. doi: 10.1093/jnci/85.4.271. [DOI] [PubMed] [Google Scholar]
  20. Tanizawa A., Fujimori A., Fujimori Y., Pommier Y. Comparison of topoisomerase I inhibition, DNA damage, and cytotoxicity of camptothecin derivatives presently in clinical trials. J Natl Cancer Inst. 1994 Jun 1;86(11):836–842. doi: 10.1093/jnci/86.11.836. [DOI] [PubMed] [Google Scholar]
  21. Tanner M. M., Tirkkonen M., Kallioniemi A., Collins C., Stokke T., Karhu R., Kowbel D., Shadravan F., Hintz M., Kuo W. L. Increased copy number at 20q13 in breast cancer: defining the critical region and exclusion of candidate genes. Cancer Res. 1994 Aug 15;54(16):4257–4260. [PubMed] [Google Scholar]
  22. van der Zee A. G., Hollema H., de Jong S., Boonstra H., Gouw A., Willemse P. H., Zijlstra J. G., de Vries E. G. P-glycoprotein expression and DNA topoisomerase I and II activity in benign tumors of the ovary and in malignant tumors of the ovary, before and after platinum/cyclophosphamide chemotherapy. Cancer Res. 1991 Nov 1;51(21):5915–5920. [PubMed] [Google Scholar]

Articles from British Journal of Cancer are provided here courtesy of Cancer Research UK

RESOURCES