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. 1991 Sep;173(18):5723–5731. doi: 10.1128/jb.173.18.5723-5731.1991

An Acetobacter xylinum insertion sequence element associated with inactivation of cellulose production.

D H Coucheron 1
PMCID: PMC208303  PMID: 1653216

Abstract

An insertion sequence (IS) element, IS1031, caused insertions associated with spontaneous cellulose deficient (Cel-) mutants of Acetobacter xylinum ATCC 23769. The element was discovered during hybridization analysis of DNAs from Cel- mutants of A. xylinum ATCC 23769 with pAXC145, an indigenous plasmid from a Cel- mutant of A. xylinum NRCC 17005. An IS element, IS1031B, apparently identical to IS1031, was identified on pAXC145. IS1031 is about 950 bp. DNA sequencing showed that the two elements had identical termini with inverted repeats of 24 bp containing two mismatches and that they generated 3-bp target sequence duplications. The A. xylinum ATCC 23769 wild type carries seven copies of IS1031. Southern hybridization showed that 8 of 17 independently isolated spontaneous Cel- mutants of ATCC 23769 contained insertions of an element homologous to IS1031. Most insertions were in unique sites, indicating low insertion specificity. Significantly, two insertions were 0.5 kb upstream of a recently identified cellulose synthase gene. Attempts to isolate spontaneous cellulose-producing revertants of these two Cel- insertion mutants by selection in static cultures were unsuccessful. Instead, pseudorevertants that made waxlike films in the liquid-air interface were obtained. The two pseudorevertants carried new insertions of an IS1031-like element in nonidentical sites of the genome without excision of the previous insertions. Taken together, these results suggest that indigenous IS elements contribute to genetic instability in A. xylinum. The elements might also be useful as genetic tools in this organism and related species.

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  1. Balbás P., Soberón X., Merino E., Zurita M., Lomeli H., Valle F., Flores N., Bolivar F. Plasmid vector pBR322 and its special-purpose derivatives--a review. Gene. 1986;50(1-3):3–40. doi: 10.1016/0378-1119(86)90307-0. [DOI] [PubMed] [Google Scholar]
  2. Bartlett D. H., Silverman M. Nucleotide sequence of IS492, a novel insertion sequence causing variation in extracellular polysaccharide production in the marine bacterium Pseudomonas atlantica. J Bacteriol. 1989 Mar;171(3):1763–1766. doi: 10.1128/jb.171.3.1763-1766.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Bartlett D. H., Wright M. E., Silverman M. Variable expression of extracellular polysaccharide in the marine bacterium Pseudomonas atlantica is controlled by genome rearrangement. Proc Natl Acad Sci U S A. 1988 Jun;85(11):3923–3927. doi: 10.1073/pnas.85.11.3923. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Boyer H. W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol. 1969 May 14;41(3):459–472. doi: 10.1016/0022-2836(69)90288-5. [DOI] [PubMed] [Google Scholar]
  5. Chen E. Y., Seeburg P. H. Supercoil sequencing: a fast and simple method for sequencing plasmid DNA. DNA. 1985 Apr;4(2):165–170. doi: 10.1089/dna.1985.4.165. [DOI] [PubMed] [Google Scholar]
  6. Church G. M., Gilbert W. Genomic sequencing. Proc Natl Acad Sci U S A. 1984 Apr;81(7):1991–1995. doi: 10.1073/pnas.81.7.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Dretzen G., Bellard M., Sassone-Corsi P., Chambon P. A reliable method for the recovery of DNA fragments from agarose and acrylamide gels. Anal Biochem. 1981 Apr;112(2):295–298. doi: 10.1016/0003-2697(81)90296-7. [DOI] [PubMed] [Google Scholar]
  8. Easson D. D., Jr, Sinskey A. J., Peoples O. P. Isolation of Zoogloea ramigera I-16-M exopolysaccharide biosynthetic genes and evidence for instability within this region. J Bacteriol. 1987 Oct;169(10):4518–4524. doi: 10.1128/jb.169.10.4518-4524.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. HESTRIN S., SCHRAMM M. Synthesis of cellulose by Acetobacter xylinum. II. Preparation of freeze-dried cells capable of polymerizing glucose to cellulose. Biochem J. 1954 Oct;58(2):345–352. doi: 10.1042/bj0580345. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Herrmann B., Bućan M., Mains P. E., Frischauf A. M., Silver L. M., Lehrach H. Genetic analysis of the proximal portion of the mouse t complex: evidence for a second inversion within t haplotypes. Cell. 1986 Feb 14;44(3):469–476. doi: 10.1016/0092-8674(86)90468-x. [DOI] [PubMed] [Google Scholar]
  11. Hötte B., Rath-Arnold I., Pühler A., Simon R. Cloning and analysis of a 35.3-kilobase DNA region involved in exopolysaccharide production by Xanthomonas campestris pv. campestris. J Bacteriol. 1990 May;172(5):2804–2807. doi: 10.1128/jb.172.5.2804-2807.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Lederberg E. M. Plasmid Reference Center Registry of transposon(Tn) and insertion sequence (IS) allocations through December 1986. Gene. 1987;51(2-3):115–118. doi: 10.1016/0378-1119(87)90299-x. [DOI] [PubMed] [Google Scholar]
  13. Reed K. C., Mann D. A. Rapid transfer of DNA from agarose gels to nylon membranes. Nucleic Acids Res. 1985 Oct 25;13(20):7207–7221. doi: 10.1093/nar/13.20.7207. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Ross P., Mayer R., Benziman M. Cellulose biosynthesis and function in bacteria. Microbiol Rev. 1991 Mar;55(1):35–58. doi: 10.1128/mr.55.1.35-58.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. SCHELL J., DE LEY J. Variability of acetic acid bacteria. Antonie Van Leeuwenhoek. 1962;28:445–465. doi: 10.1007/BF02538760. [DOI] [PubMed] [Google Scholar]
  16. SCHRAMM M., HESTRIN S. Factors affecting production of cellulose at the air/liquid interface of a culture of Acetobacter xylinum. J Gen Microbiol. 1954 Aug;11(1):123–129. doi: 10.1099/00221287-11-1-123. [DOI] [PubMed] [Google Scholar]
  17. STEEL R., WALKER T. K. A comparative study of cellulose-producing cultures and celluloseless mutants of certain Acetobacter spp. J Gen Microbiol. 1957 Oct;17(2):445–452. doi: 10.1099/00221287-17-2-445. [DOI] [PubMed] [Google Scholar]
  18. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Saxena I. M., Lin F. C., Brown R. M., Jr Cloning and sequencing of the cellulose synthase catalytic subunit gene of Acetobacter xylinum. Plant Mol Biol. 1990 Nov;15(5):673–683. doi: 10.1007/BF00016118. [DOI] [PubMed] [Google Scholar]
  20. Smith H. O. Recovery of DNA from gels. Methods Enzymol. 1980;65(1):371–380. doi: 10.1016/s0076-6879(80)65048-4. [DOI] [PubMed] [Google Scholar]
  21. Valla S., Coucheron D. H., Fjaervik E., Kjosbakken J., Weinhouse H., Ross P., Amikam D., Benziman M. Cloning of a gene involved in cellulose biosynthesis in Acetobacter xylinum: complementation of cellulose-negative mutants by the UDPG pyrophosphorylase structural gene. Mol Gen Genet. 1989 May;217(1):26–30. doi: 10.1007/BF00330938. [DOI] [PubMed] [Google Scholar]
  22. Valla S., Coucheron D. H., Kjosbakken J. Conjugative transfer of the naturally occurring plasmids of Acetobacter xylinum by IncP-plasmid-mediated mobilization. J Bacteriol. 1986 Jan;165(1):336–339. doi: 10.1128/jb.165.1.336-339.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Valla S., Coucheron D. H., Kjosbakken J. The plasmids of Acetobacter xylinum and their interaction with the host chromosome. Mol Gen Genet. 1987 Jun;208(1-2):76–83. doi: 10.1007/BF00330425. [DOI] [PubMed] [Google Scholar]
  24. Wieslander L. A simple method to recover intact high molecular weight RNA and DNA after electrophoretic separation in low gelling temperature agarose gels. Anal Biochem. 1979 Oct 1;98(2):305–309. doi: 10.1016/0003-2697(79)90145-3. [DOI] [PubMed] [Google Scholar]
  25. Wong H. C., Fear A. L., Calhoon R. D., Eichinger G. H., Mayer R., Amikam D., Benziman M., Gelfand D. H., Meade J. H., Emerick A. W. Genetic organization of the cellulose synthase operon in Acetobacter xylinum. Proc Natl Acad Sci U S A. 1990 Oct;87(20):8130–8134. doi: 10.1073/pnas.87.20.8130. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. doi: 10.1016/0378-1119(85)90120-9. [DOI] [PubMed] [Google Scholar]

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