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. 1978 May 1;77(2):488–506. doi: 10.1083/jcb.77.2.488

Proteins of rough microsomal membranes related to ribosome binding. II. Cross-linking of bound ribosomes to specific membrane proteins exposed at the binding sites

PMCID: PMC2110044  PMID: 418074

Abstract

Two proteins (ribophorins I and II), which are integral components of rough microsomal membranes and appear to be related to the bound ribosomes, were shown to be exposed on the surface of rat liver rough microsomes (RM) and to be in close proximity to the bound ribosomes. Both proteins were labeled when intact RM were incubated with a lactoperoxidase iodinating system, but only ribophorin I was digested during mild trypsinization of intact RM. Ribophorin II (63,000 daltons) was only proteolyzed when the luminal face of the microsomal vesicles was made accessible to trypsin by the addition of sublytical detergent concentrations. Only 30--40% of the bound ribosomes were released during trypsinization on intact RM, but ribosome release was almost complete in the presence of low detergent concentrations. Very low glutaraldehyde concentrations (0.005--0.02%) led to the preferential cross-linking of large ribosomal subunits of bound ribosomes to the microsomal membranes. This cross-linking prevented the release of subunits caused by puromycin in media of high ionic strength, but not the incorporation of [3H]puromycin into nascent polypeptide chains. SDS- acrylamide gel electrophoresis of cross-linked samples a preferential reduction in the intensity of the bands representing the ribophorins and the formation of aggregates which did not penetrate into the gels. At low methyl-4-mercaptobutyrimidate (MMB) concentrations (0.26 mg/ml) only 30% of the ribosomes were cross-linked to the microsomal membranes, as shown by the puromycin-KCl test, but membranes could still be solubilized with 1% DOC. This allowed the isolation of the ribophorins together with the sedimentable ribosomes, as was shown by electrophoresis of the sediments after disruption of the cross-links by reduction. Experiments with RM which contained only inactive ribosomes showed that the presence of nascent chains was not necessary for the reversible cross-linking of ribosomes to the membranes. These observations suggest that ribophorins are in close proximity to the bound ribosomes, as may be expected from components of the ribosome- binding sites.

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Selected References

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  1. Adelman M. R., Blobel G., Sabatini D. D. An improved cell fractionation procedure for the preparation of rat liver membrane-bound ribosomes. J Cell Biol. 1973 Jan;56(1):191–205. doi: 10.1083/jcb.56.1.191. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Blobel G., Dobberstein B. Transfer of proteins across membranes. I. Presence of proteolytically processed and unprocessed nascent immunoglobulin light chains on membrane-bound ribosomes of murine myeloma. J Cell Biol. 1975 Dec;67(3):835–851. doi: 10.1083/jcb.67.3.835. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Blobel G., Dobberstein B. Transfer of proteins across membranes. II. Reconstitution of functional rough microsomes from heterologous components. J Cell Biol. 1975 Dec;67(3):852–862. doi: 10.1083/jcb.67.3.852. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Borgese D., Blobel G., Sabatini D. D. In vitro exchange of ribosomal subunits between free and membrane-bound ribosomes. J Mol Biol. 1973 Mar 15;74(4):415–438. doi: 10.1016/0022-2836(73)90037-5. [DOI] [PubMed] [Google Scholar]
  5. Davies G. E., Stark G. R. Use of dimethyl suberimidate, a cross-linking reagent, in studying the subunit structure of oligomeric proteins. Proc Natl Acad Sci U S A. 1970 Jul;66(3):651–656. doi: 10.1073/pnas.66.3.651. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Hubbard A. L., Cohn Z. A. The enzymatic iodination of the red cell membrane. J Cell Biol. 1972 Nov;55(2):390–405. doi: 10.1083/jcb.55.2.390. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Ito A., Sato R. Proteolytic microdissection of smooth-surfaced vesicles of liver microsomes. J Cell Biol. 1969 Jan;40(1):179–189. doi: 10.1083/jcb.40.1.179. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Jothy S., Bilodeau J. L., Simpkins H. The role of membrane proteins and phospholipids in the interaction of ribosomes with endoplasmic reticulum membranes. Can J Biochem. 1975 Sep;53(9):1039–1045. doi: 10.1139/o75-143. [DOI] [PubMed] [Google Scholar]
  9. Kahan L., Kaltschmidt E. Glutaraldehyde reactivity of the proteins of Escherichia coli ribosomes. Biochemistry. 1972 Jul 4;11(14):2691–2698. doi: 10.1021/bi00764a022. [DOI] [PubMed] [Google Scholar]
  10. Kreibich G., Ulrich B. L., Sabatini D. D. Proteins of rough microsomal membranes related to ribosome binding. I. Identification of ribophorins I and II, membrane proteins characteristics of rough microsomes. J Cell Biol. 1978 May;77(2):464–487. doi: 10.1083/jcb.77.2.464. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Kruppa J., Sabatini D. D. Release of poly A(+) messenger RNA from rat liver rough microsomes upon disassembly of bound polysomes. J Cell Biol. 1977 Aug;74(2):414–427. doi: 10.1083/jcb.74.2.414. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Morrison M., Bayse G. S., Webster R. G. Use of lactoperoxidase catalyzed iodination in immunochemical studies. Immunochemistry. 1971 Mar;8(3):289–297. doi: 10.1016/0019-2791(71)90484-8. [DOI] [PubMed] [Google Scholar]
  13. Negishi M., Sawamura T., Morimoto T., Tashiro Y. Localization of nascent NADPH-cytochrome c reductase in rat liver microsomes. Biochim Biophys Acta. 1975 Jan 13;381(1):215–220. doi: 10.1016/0304-4165(75)90203-2. [DOI] [PubMed] [Google Scholar]
  14. Olins D. E., Wright E. B. Glutaraldehyde fixation of isolated eucaryotic nuclei. Evidence for histone-histone proximity. J Cell Biol. 1973 Nov;59(2 Pt 1):304–317. doi: 10.1083/jcb.59.2.304. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Pitt-Rivers R., Impiombato F. S. The binding of sodium dodecyl sulphate to various proteins. Biochem J. 1968 Oct;109(5):825–830. doi: 10.1042/bj1090825. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Sabatini D. D., Blobel G. Controlled proteolysis of nascent polypeptides in rat liver cell fractions. II. Location of the polypeptides in rough microsomes. J Cell Biol. 1970 Apr;45(1):146–157. doi: 10.1083/jcb.45.1.146. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Sabatini D. D., Tashiro Y., Palade G. E. On the attachment of ribosomes to microsomal membranes. J Mol Biol. 1966 Aug;19(2):503–524. doi: 10.1016/s0022-2836(66)80019-0. [DOI] [PubMed] [Google Scholar]
  18. Shires T. K., Narurkar L. M., Pitot H. C. Polysome interaction in vitro with microsomal membranes from rat liver. Biochem Biophys Res Commun. 1971 Dec 3;45(5):1212–1218. doi: 10.1016/0006-291x(71)90147-1. [DOI] [PubMed] [Google Scholar]
  19. Sommer A., Traut R. R. Identification of neighboring protein pairs in the Escherichia coli 30 S ribosomal subunit by crosslinking with methyl-4-mercaptobutyrimidate. J Mol Biol. 1976 Oct 5;106(4):995–1015. doi: 10.1016/0022-2836(76)90348-x. [DOI] [PubMed] [Google Scholar]
  20. Steck T. L. Cross-linking the major proteins of the isolated erythrocyte membrane. J Mol Biol. 1972 May 14;66(2):295–305. doi: 10.1016/0022-2836(72)90481-0. [DOI] [PubMed] [Google Scholar]
  21. Sun T. T., Bollen A., Kahan L., Traut R. R. Topography of ribosomal proteins of the Escherichia coli 30S subunit as studied with the reversible cross-linking reagent methyl 4-mercaptobutyrimidate. Biochemistry. 1974 May 21;13(11):2334–2340. doi: 10.1021/bi00708a015. [DOI] [PubMed] [Google Scholar]
  22. TASHIRO Y., SIEKEVITZ P. ULTRACENTRIFUGAL STUDIES ON THE DISSOCIATION OF HEPATIC RIBOSOMES. J Mol Biol. 1965 Feb;11:149–165. doi: 10.1016/s0022-2836(65)80047-x. [DOI] [PubMed] [Google Scholar]
  23. Tinberg H. M., Lee C., Packer L. Effect of crosslinking on mitochondrial structure and function. J Supramol Struct. 1975;3(3):275–283. doi: 10.1002/jss.400030310. [DOI] [PubMed] [Google Scholar]
  24. Traut R. R., Bollen A., Sun T. T., Hershey J. W., Sundberg J., Pierce L. R. Methyl 4-mercaptobutyrimidate as a cleavable cross-linking reagent and its application to the Escherichia coli 30S ribosome. Biochemistry. 1973 Aug 14;12(17):3266–3273. doi: 10.1021/bi00741a019. [DOI] [PubMed] [Google Scholar]
  25. Wang K., Richards F. M. An approach to nearest neighbor analysis of membrane proteins. Application to the human erythrocyte membrane of a method employing cleavable cross-linkages. J Biol Chem. 1974 Dec 25;249(24):8005–8018. [PubMed] [Google Scholar]
  26. Welton A. F., Aust S. D. Lipid peroxidation during enzymatic iodination of rat liver endoplasmic reticulum. Biochem Biophys Res Commun. 1972 Nov 1;49(3):661–666. doi: 10.1016/0006-291x(72)90462-7. [DOI] [PubMed] [Google Scholar]
  27. Welton A. F., Aust S. D. The effects of 3-methylcholanthrene and phenobarbital induction on the structure of the rat liver endoplasmic reticulum. Biochim Biophys Acta. 1974 Dec 10;373(2):197–210. doi: 10.1016/0005-2736(74)90145-x. [DOI] [PubMed] [Google Scholar]

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