Skip to main content
Journal of Bacteriology logoLink to Journal of Bacteriology
. 1987 Nov;169(11):5078–5086. doi: 10.1128/jb.169.11.5078-5086.1987

Novel incompatibility and partition loci for the REPI replication region of plasmid ColV-K30.

J F Perez-Casal 1, J H Crosa 1
PMCID: PMC213911  PMID: 2822663

Abstract

The minimum pColV-K30 REPI region necessary for replication was located within a ca. 1.3-kilobase DNA segment. Adjacent to the essential replication sequences, there are two DNA regions that express incompatibility with plasmids containing the F secondary replicon of the F EcoRI fragment f7. One of these regions corresponds to incE, already described in that F plasmid fragment which expresses incompatibility with f7-containing plasmids. The other is a novel sequence that we designated incF, which confers incompatibility with REPI, P307, and f7 derivatives, cis-acting pColV-K30 sequences conferring stability to REPI-containing plasmids were also identified and localized noncontiguous to REPI, ca. 20 kilobases downstream from the aerobactin iron transport genes, which were thus flanked by REPI and its partition (par) sequences.

Full text

PDF
5078

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bergquist P. L., Lane H. E., Malcolm L., Downard R. A. Molecular homology and incompatibility in the IncFI plasmid Group. J Gen Microbiol. 1982 Feb;128(2):223–238. doi: 10.1099/00221287-128-2-223. [DOI] [PubMed] [Google Scholar]
  2. Bergquist P. L., Saadi S., Maas W. K. Distribution of basic replicons having homology with RepFIA, RepFIB, and RepFIC among IncF group plasmids. Plasmid. 1986 Jan;15(1):19–34. doi: 10.1016/0147-619x(86)90011-9. [DOI] [PubMed] [Google Scholar]
  3. Birnboim H. C., Doly J. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 1979 Nov 24;7(6):1513–1523. doi: 10.1093/nar/7.6.1513. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Bolivar F. Construction and characterization of new cloning vehicles. III. Derivatives of plasmid pBR322 carrying unique Eco RI sites for selection of Eco RI generated recombinant DNA molecules. Gene. 1978 Oct;4(2):121–136. doi: 10.1016/0378-1119(78)90025-2. [DOI] [PubMed] [Google Scholar]
  5. Bolivar F., Rodriguez R. L., Greene P. J., Betlach M. C., Heyneker H. L., Boyer H. W., Crosa J. H., Falkow S. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene. 1977;2(2):95–113. [PubMed] [Google Scholar]
  6. Boyer H. W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol. 1969 May 14;41(3):459–472. doi: 10.1016/0022-2836(69)90288-5. [DOI] [PubMed] [Google Scholar]
  7. Colonna B., Nicoletti M., Visca P., Casalino M., Valenti P., Maimone F. Composite IS1 elements encoding hydroxamate-mediated iron uptake in FIme plasmids from epidemic Salmonella spp. J Bacteriol. 1985 Apr;162(1):307–316. doi: 10.1128/jb.162.1.307-316.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Crosa J. H. The relationship of plasmid-mediated iron transport and bacterial virulence. Annu Rev Microbiol. 1984;38:69–89. doi: 10.1146/annurev.mi.38.100184.000441. [DOI] [PubMed] [Google Scholar]
  9. De Lucia P., Cairns J. Isolation of an E. coli strain with a mutation affecting DNA polymerase. Nature. 1969 Dec 20;224(5225):1164–1166. doi: 10.1038/2241164a0. [DOI] [PubMed] [Google Scholar]
  10. Gardner R., McAnulty J., Feher E., Lane D. Location of rep and inc sequences in the F secondary replicon. Plasmid. 1985 Mar;13(2):145–148. doi: 10.1016/0147-619x(85)90067-8. [DOI] [PubMed] [Google Scholar]
  11. Gerdes K., Bech F. W., Jørgensen S. T., Løbner-Olesen A., Rasmussen P. B., Atlung T., Boe L., Karlstrom O., Molin S., von Meyenburg K. Mechanism of postsegregational killing by the hok gene product of the parB system of plasmid R1 and its homology with the relF gene product of the E. coli relB operon. EMBO J. 1986 Aug;5(8):2023–2029. doi: 10.1002/j.1460-2075.1986.tb04459.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Kolodkin A. L., Capage M. A., Golub E. I., Low K. B. F sex factor of Escherichia coli K-12 codes for a single-stranded DNA binding protein. Proc Natl Acad Sci U S A. 1983 Jul;80(14):4422–4426. doi: 10.1073/pnas.80.14.4422. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Lane D., Gardner R. C. Second EcoRI fragment of F capable of self-replication. J Bacteriol. 1979 Jul;139(1):141–151. doi: 10.1128/jb.139.1.141-151.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Lane H. E. Replication and incompatibility of F and plasmids in the IncFI Group. Plasmid. 1981 Jan;5(1):100–126. doi: 10.1016/0147-619x(81)90079-2. [DOI] [PubMed] [Google Scholar]
  15. Leong S. A., Ditta G. S., Helinski D. R. Heme biosynthesis in Rhizobium. Identification of a cloned gene coding for delta-aminolevulinic acid synthetase from Rhizobium meliloti. J Biol Chem. 1982 Aug 10;257(15):8724–8730. [PubMed] [Google Scholar]
  16. Lovett M. A., Helinski D. R. Method for the isolation of the replication region of a bacterial replicon: construction of a mini-F'kn plasmid. J Bacteriol. 1976 Aug;127(2):982–987. doi: 10.1128/jb.127.2.982-987.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Nilius A. M., Savage D. C. Serum resistance encoded by colicin V plasmids in Escherichia coli and its relationship to the plasmid transfer system. Infect Immun. 1984 Mar;43(3):947–953. doi: 10.1128/iai.43.3.947-953.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Ogura T., Hiraga S. Mini-F plasmid genes that couple host cell division to plasmid proliferation. Proc Natl Acad Sci U S A. 1983 Aug;80(15):4784–4788. doi: 10.1073/pnas.80.15.4784. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Ogura T., Hiraga S. Partition mechanism of F plasmid: two plasmid gene-encoded products and a cis-acting region are involved in partition. Cell. 1983 Feb;32(2):351–360. doi: 10.1016/0092-8674(83)90454-3. [DOI] [PubMed] [Google Scholar]
  20. Perez-Casal J. F., Crosa J. H. Aerobactin iron uptake sequences in plasmid ColV-K30 are flanked by inverted IS1-like elements and replication regions. J Bacteriol. 1984 Oct;160(1):256–265. doi: 10.1128/jb.160.1.256-265.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Picken R. N., Mazaitis A. J., Saadi S., Maas W. K. Characterization of the basic replicons of the chimeric R/Ent plasmid pCG86 and the related Ent plasmid P307. Plasmid. 1984 Jul;12(1):10–18. doi: 10.1016/0147-619x(84)90062-3. [DOI] [PubMed] [Google Scholar]
  22. Ray A., Skurray R. Stabilization of the cloning vector pACYC184 by insertion of F plasmid leading region sequences. Plasmid. 1984 May;11(3):272–275. doi: 10.1016/0147-619x(84)90036-2. [DOI] [PubMed] [Google Scholar]
  23. Rigby P. W., Dieckmann M., Rhodes C., Berg P. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J Mol Biol. 1977 Jun 15;113(1):237–251. doi: 10.1016/0022-2836(77)90052-3. [DOI] [PubMed] [Google Scholar]
  24. Sharp P. A., Cohen S. N., Davidson N. Electron microscope heteroduplex studies of sequence relations among plasmids of Escherichia coli. II. Structure of drug resistance (R) factors and F factors. J Mol Biol. 1973 Apr 5;75(2):235–255. doi: 10.1016/0022-2836(73)90018-1. [DOI] [PubMed] [Google Scholar]
  25. Southern E. M. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol. 1975 Nov 5;98(3):503–517. doi: 10.1016/s0022-2836(75)80083-0. [DOI] [PubMed] [Google Scholar]
  26. Taylor D. P., Cohen S. N. Structural and functional analysis of cloned DNA segments containing the replication and incompatibility regions of a miniplasmid derived from a copy number mutant of NR1. J Bacteriol. 1979 Jan;137(1):92–104. doi: 10.1128/jb.137.1.92-104.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Timmis K. N., Cabello F., Cohen S. N. Cloning and characterization of EcoRI and HindIII restriction endonuclease-generated fragments of antibiotic resistance plasmids R6-5 and R6. Mol Gen Genet. 1978 Jun 14;162(2):121–137. doi: 10.1007/BF00267869. [DOI] [PubMed] [Google Scholar]
  28. Vieira J., Messing J. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene. 1982 Oct;19(3):259–268. doi: 10.1016/0378-1119(82)90015-4. [DOI] [PubMed] [Google Scholar]
  29. Warner P. J., Williams P. H., Bindereif A., Neilands J. B. ColV plasmid-specific aerobactin synthesis by invasive strains of Escherichia coli. Infect Immun. 1981 Aug;33(2):540–545. doi: 10.1128/iai.33.2.540-545.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Waters V. L., Crosa J. H. DNA environment of the aerobactin iron uptake system genes in prototypic ColV plasmids. J Bacteriol. 1986 Aug;167(2):647–654. doi: 10.1128/jb.167.2.647-654.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Weber P. C., Palchaudhuri S. Characterization of the stability functions and inverted repeat structure X3 of the IncFI plasmid ColV2-K94. Can J Microbiol. 1986 Oct;32(10):806–813. doi: 10.1139/m86-148. [DOI] [PubMed] [Google Scholar]
  32. Willetts N., Skurray R. The conjugation system of F-like plasmids. Annu Rev Genet. 1980;14:41–76. doi: 10.1146/annurev.ge.14.120180.000353. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Bacteriology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES