Abstract
We have studied the effect of the components of the GroE molecular chaperone machine on the refolding of the Escherichia coli enzyme beta-galactosidase, a tetrameric protein whose 116-kDa promoters should not completely fit within the central cavity of the GroEL toroid. In the absence of other additives, GroEL formed a weak complex with chemically denatured beta-galactosidase, reduced its propensity to aggregate, and increased the recovery yields of active enzyme twofold without altering its folding pathway. When present together with the chaperonin, ATP--and to a lesser extent AMP-PNP--reduced the recovery yields and led to the resumption of aggregation. The use of the complete chaperonin system (GroEL, GroES, and ATP) eliminated the GroEL-mediated increase in recovery and folding proceeded less efficiently than in buffer alone. This unusual behavior can be explained in terms of a chaperonin "buffering" effect and the different affinities of GroE complexes for denatured beta-galactosidase.
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- Badcoe I. G., Smith C. J., Wood S., Halsall D. J., Holbrook J. J., Lund P., Clarke A. R. Binding of a chaperonin to the folding intermediates of lactate dehydrogenase. Biochemistry. 1991 Sep 24;30(38):9195–9200. doi: 10.1021/bi00102a010. [DOI] [PubMed] [Google Scholar]
- Baneyx F. Chaperonins and protein folding. Ann N Y Acad Sci. 1994 Nov 30;745:383–394. doi: 10.1111/j.1749-6632.1994.tb44390.x. [DOI] [PubMed] [Google Scholar]
- Baneyx F., Gatenby A. A. A mutation in GroEL interferes with protein folding by reducing the rate of discharge of sequestered polypeptides. J Biol Chem. 1992 Jun 5;267(16):11637–11644. [PubMed] [Google Scholar]
- Braig K., Otwinowski Z., Hegde R., Boisvert D. C., Joachimiak A., Horwich A. L., Sigler P. B. The crystal structure of the bacterial chaperonin GroEL at 2.8 A. Nature. 1994 Oct 13;371(6498):578–586. doi: 10.1038/371578a0. [DOI] [PubMed] [Google Scholar]
- Braig K., Simon M., Furuya F., Hainfeld J. F., Horwich A. L. A polypeptide bound by the chaperonin groEL is localized within a central cavity. Proc Natl Acad Sci U S A. 1993 May 1;90(9):3978–3982. doi: 10.1073/pnas.90.9.3978. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Buchner J., Schmidt M., Fuchs M., Jaenicke R., Rudolph R., Schmid F. X., Kiefhaber T. GroE facilitates refolding of citrate synthase by suppressing aggregation. Biochemistry. 1991 Feb 12;30(6):1586–1591. doi: 10.1021/bi00220a020. [DOI] [PubMed] [Google Scholar]
- Celada F., Ullmann A., Monod J. An immunological study of complementary fragments of beta-galactosidase. Biochemistry. 1974 Dec 31;13(27):5543–5547. doi: 10.1021/bi00724a014. [DOI] [PubMed] [Google Scholar]
- Chandrasekhar G. N., Tilly K., Woolford C., Hendrix R., Georgopoulos C. Purification and properties of the groES morphogenetic protein of Escherichia coli. J Biol Chem. 1986 Sep 15;261(26):12414–12419. [PubMed] [Google Scholar]
- Chen S., Roseman A. M., Hunter A. S., Wood S. P., Burston S. G., Ranson N. A., Clarke A. R., Saibil H. R. Location of a folding protein and shape changes in GroEL-GroES complexes imaged by cryo-electron microscopy. Nature. 1994 Sep 15;371(6494):261–264. doi: 10.1038/371261a0. [DOI] [PubMed] [Google Scholar]
- Corrales F. J., Fersht A. R. The folding of GroEL-bound barnase as a model for chaperonin-mediated protein folding. Proc Natl Acad Sci U S A. 1995 Jun 6;92(12):5326–5330. doi: 10.1073/pnas.92.12.5326. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Edwards R. A., Jacobson A. L., Huber R. E. Thermal denaturation of beta-galactosidase and of two site-specific mutants. Biochemistry. 1990 Dec 11;29(49):11001–11008. doi: 10.1021/bi00501a019. [DOI] [PubMed] [Google Scholar]
- Engel A., Hayer-Hartl M. K., Goldie K. N., Pfeifer G., Hegerl R., Müller S., da Silva A. C., Baumeister W., Hartl F. U. Functional significance of symmetrical versus asymmetrical GroEL-GroES chaperonin complexes. Science. 1995 Aug 11;269(5225):832–836. doi: 10.1126/science.7638600. [DOI] [PubMed] [Google Scholar]
- Georgopoulos C., Welch W. J. Role of the major heat shock proteins as molecular chaperones. Annu Rev Cell Biol. 1993;9:601–634. doi: 10.1146/annurev.cb.09.110193.003125. [DOI] [PubMed] [Google Scholar]
- Goloubinoff P., Christeller J. T., Gatenby A. A., Lorimer G. H. Reconstitution of active dimeric ribulose bisphosphate carboxylase from an unfoleded state depends on two chaperonin proteins and Mg-ATP. Nature. 1989 Dec 21;342(6252):884–889. doi: 10.1038/342884a0. [DOI] [PubMed] [Google Scholar]
- Goloubinoff P., Gatenby A. A., Lorimer G. H. GroE heat-shock proteins promote assembly of foreign prokaryotic ribulose bisphosphate carboxylase oligomers in Escherichia coli. Nature. 1989 Jan 5;337(6202):44–47. doi: 10.1038/337044a0. [DOI] [PubMed] [Google Scholar]
- Gray T. E., Fersht A. R. Cooperativity in ATP hydrolysis by GroEL is increased by GroES. FEBS Lett. 1991 Nov 4;292(1-2):254–258. doi: 10.1016/0014-5793(91)80878-7. [DOI] [PubMed] [Google Scholar]
- Grimm R., Donaldson G. K., van der Vies S. M., Schäfer E., Gatenby A. A. Chaperonin-mediated reconstitution of the phytochrome photoreceptor. J Biol Chem. 1993 Mar 5;268(7):5220–5226. [PubMed] [Google Scholar]
- Hansen J. E., Gafni A. Thermal switching between enhanced and arrested reactivation of bacterial glucose-6-phosphate dehydrogenase assisted by GroEL in the absence of ATP. J Biol Chem. 1993 Oct 15;268(29):21632–21636. [PubMed] [Google Scholar]
- Hartl F. U., Hlodan R., Langer T. Molecular chaperones in protein folding: the art of avoiding sticky situations. Trends Biochem Sci. 1994 Jan;19(1):20–25. doi: 10.1016/0968-0004(94)90169-4. [DOI] [PubMed] [Google Scholar]
- Hartl F. U., Martin J. Molecular chaperones in cellular protein folding. Curr Opin Struct Biol. 1995 Feb;5(1):92–102. doi: 10.1016/0959-440x(95)80014-r. [DOI] [PubMed] [Google Scholar]
- Kalnins A., Otto K., Rüther U., Müller-Hill B. Sequence of the lacZ gene of Escherichia coli. EMBO J. 1983;2(4):593–597. doi: 10.1002/j.1460-2075.1983.tb01468.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Landry S. J., Zeilstra-Ryalls J., Fayet O., Georgopoulos C., Gierasch L. M. Characterization of a functionally important mobile domain of GroES. Nature. 1993 Jul 15;364(6434):255–258. doi: 10.1038/364255a0. [DOI] [PubMed] [Google Scholar]
- Martin J., Langer T., Boteva R., Schramel A., Horwich A. L., Hartl F. U. Chaperonin-mediated protein folding at the surface of groEL through a 'molten globule'-like intermediate. Nature. 1991 Jul 4;352(6330):36–42. doi: 10.1038/352036a0. [DOI] [PubMed] [Google Scholar]
- Schmidt M., Buchner J., Todd M. J., Lorimer G. H., Viitanen P. V. On the role of groES in the chaperonin-assisted folding reaction. Three case studies. J Biol Chem. 1994 Apr 8;269(14):10304–10311. [PubMed] [Google Scholar]
- Todd M. J., Viitanen P. V., Lorimer G. H. Dynamics of the chaperonin ATPase cycle: implications for facilitated protein folding. Science. 1994 Jul 29;265(5172):659–666. doi: 10.1126/science.7913555. [DOI] [PubMed] [Google Scholar]
- Todd M. J., Viitanen P. V., Lorimer G. H. Hydrolysis of adenosine 5'-triphosphate by Escherichia coli GroEL: effects of GroES and potassium ion. Biochemistry. 1993 Aug 24;32(33):8560–8567. doi: 10.1021/bi00084a024. [DOI] [PubMed] [Google Scholar]
- Ullmann A., Monod J. On the effect of divalent cations and protein concentration upon renaturation of beta-galactosidase from E. coli. Biochem Biophys Res Commun. 1969 Apr 10;35(1):35–42. doi: 10.1016/0006-291x(69)90479-3. [DOI] [PubMed] [Google Scholar]
- Viitanen P. V., Donaldson G. K., Lorimer G. H., Lubben T. H., Gatenby A. A. Complex interactions between the chaperonin 60 molecular chaperone and dihydrofolate reductase. Biochemistry. 1991 Oct 8;30(40):9716–9723. doi: 10.1021/bi00104a021. [DOI] [PubMed] [Google Scholar]
- Waxman L., Goldberg A. L. Selectivity of intracellular proteolysis: protein substrates activate the ATP-dependent protease (La). Science. 1986 Apr 25;232(4749):500–503. doi: 10.1126/science.2938257. [DOI] [PubMed] [Google Scholar]
- Weissman J. S., Kashi Y., Fenton W. A., Horwich A. L. GroEL-mediated protein folding proceeds by multiple rounds of binding and release of nonnative forms. Cell. 1994 Aug 26;78(4):693–702. doi: 10.1016/0092-8674(94)90533-9. [DOI] [PubMed] [Google Scholar]
- Wickson V. M., Huber R. E. The stability of beta galactosidase in the presence of urea. Biochim Biophys Acta. 1969 Jul 1;181(2):419–425. doi: 10.1016/0005-2795(69)90275-x. [DOI] [PubMed] [Google Scholar]
- ZIPSER D. A STUDY OF THE UREA-PRODUCED SUBUNITS OF BETA-GALACTOSIDASE. J Mol Biol. 1963 Aug;7:113–121. doi: 10.1016/s0022-2836(63)80040-6. [DOI] [PubMed] [Google Scholar]
- van der Vies S. M., Viitanen P. V., Gatenby A. A., Lorimer G. H., Jaenicke R. Conformational states of ribulosebisphosphate carboxylase and their interaction with chaperonin 60. Biochemistry. 1992 Apr 14;31(14):3635–3644. doi: 10.1021/bi00129a012. [DOI] [PubMed] [Google Scholar]
