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. 1985 Mar;161(3):831–835. doi: 10.1128/jb.161.3.831-835.1985

Rapid method for isolation and screening of cytochrome c oxidase-deficient mutants of Saccharomyces cerevisiae.

J E McEwen, V L Cameron, R O Poyton
PMCID: PMC214973  PMID: 2982789

Abstract

We describe here a new method for the specific isolation of cytochrome c oxidase-deficient mutants of Saccharomyces cerevisiae. One unique feature of the method is the use of tetramethyl-p-phenylenediamine as a cytochrome c oxidase activity stain for yeast colonies. The staining of yeast colonies by tetramethyl-p-phenylenediamine is dependent upon a functional cytochrome c oxidase and is unaffected by other lesions in respiration. Since the tetramethyl-p-phenylenediamine colony staining reaction is rapid and simple, it greatly facilitates both the identification and characterization of cytochrome c oxidase-deficient mutants. Another feature of the method, which is made possible by the tetramethyl-p-phenylenediamine colony stain, is the use of an op1 parent strain for the isolation of nuclear pet or mitochondrial mit mutants in specific protein-coding genes. A parent strain that carries this marker selects against rho0 or rho- classes of pleiotropic respiratory-deficient mutants, since these are lethal in op1 strains. We have used this method to isolate 123 independently derived cytochrome c oxidase-deficient pet mutants and 300 independently derived mit mutants.

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Selected References

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  1. Beck J. C., Mattoon J. R., Hawthorne D. C., Sherman F. Genetic modification of energy-conserving systems in yeast mitochondria. Proc Natl Acad Sci U S A. 1968 May;60(1):186–193. doi: 10.1073/pnas.60.1.186. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bonitz S. G., Coruzzi G., Thalenfeld B. E., Tzagoloff A., Macino G. Assembly of the mitochondrial membrane system. Physical map of the Oxi3 locus of yeast mitochondrial DNA. J Biol Chem. 1980 Dec 25;255(24):11922–11926. [PubMed] [Google Scholar]
  3. Cabral F., Schatz G. Identification of cytochrome c oxidase subunits in nuclear yeast mutants lacking the functional enzyme. J Biol Chem. 1978 Jun 25;253(12):4396–4401. [PubMed] [Google Scholar]
  4. Coruzzi G., Tzagoloff A. Assembly of the mitochondrial membrane system. DNA sequence of subunit 2 of yeast cytochrome oxidase. J Biol Chem. 1979 Sep 25;254(18):9324–9330. [PubMed] [Google Scholar]
  5. Cumsky M. G., McEwen J. E., Ko C., Poyton R. O. Nuclear genes for mitochondrial proteins. Identification and isolation of a structural gene for subunit V of yeast cytochrome c oxidase. J Biol Chem. 1983 Nov 25;258(22):13418–13421. [PubMed] [Google Scholar]
  6. Ebner E., Mennucci L., Schatz G. Mitochondrial assembly in respiration-deficient mutants of Saccharomyces cerevisiae. I. Effect of nuclear mutations on mitochondrial protein synthesis. J Biol Chem. 1973 Aug 10;248(15):5360–5368. [PubMed] [Google Scholar]
  7. Faye G., Simon M. Analysis of a yeast nuclear gene involved in the maturation of mitochondrial pre-messenger RNA of the cytochrome oxidase subunit I. Cell. 1983 Jan;32(1):77–87. doi: 10.1016/0092-8674(83)90498-1. [DOI] [PubMed] [Google Scholar]
  8. Ferguson-Miller S., Brautigan D. L., Margoliash E. Definition of cytochrome c binding domains by chemical modification. III. Kinetics of reaction of carboxydinitrophenyl cytochromes c with cytochrome c oxidase. J Biol Chem. 1978 Jan 10;253(1):149–159. [PubMed] [Google Scholar]
  9. Hill B. C., Nicholls P. Reduction and activity of cytochrome c in the cytochrome c-cytochrome aa3 complex. Biochem J. 1980 Jun 1;187(3):809–818. doi: 10.1042/bj1870809. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. JACOBS E. E. Phosphorylation coupled to electron transport initiated by substituted phenylenediamines. Biochem Biophys Res Commun. 1960 Nov;3:536–539. doi: 10.1016/0006-291x(60)90170-4. [DOI] [PubMed] [Google Scholar]
  11. Kovácová V., Irmlerová J., Kovác L. Oxidative phosphorylatiion in yeast. IV. Combination of a nuclear mutation affecting oxidative phosphorylation with cytoplasmic mutation to respiratory deficiency. Biochim Biophys Acta. 1968 Aug 20;162(2):157–163. doi: 10.1016/0005-2728(68)90097-2. [DOI] [PubMed] [Google Scholar]
  12. LOWRY O. H., ROSEBROUGH N. J., FARR A. L., RANDALL R. J. Protein measurement with the Folin phenol reagent. J Biol Chem. 1951 Nov;193(1):265–275. [PubMed] [Google Scholar]
  13. Mason T. L., Schatz G. Cytochrome c oxidase from bakers' yeast. II. Site of translation of the protein components. J Biol Chem. 1973 Feb 25;248(4):1355–1360. [PubMed] [Google Scholar]
  14. McEwen J. E., Cumsky M. G., Ko C., Power S. D., Poyton R. O. Mitochondrial membrane biogenesis: characterization and use of pet mutants to clone the nuclear gene coding for subunit V of yeast cytochrome c oxidase. J Cell Biochem. 1984;24(3):229–242. doi: 10.1002/jcb.240240305. [DOI] [PubMed] [Google Scholar]
  15. McKee E. E., McEwen J. E., Poyton R. O. Mitochondrial gene expression in saccharomyces cerevisiae. II. Fidelity of translation in isolated mitochondria from wild type and respiratory-deficient mutant cells. J Biol Chem. 1984 Jul 25;259(14):9332–9338. [PubMed] [Google Scholar]
  16. Mowshowitz D. B. Permeabilization of yeast for enzyme assays: an extremely simple method for small samples. Anal Biochem. 1976 Jan;70(1):94–99. doi: 10.1016/s0003-2697(76)80051-6. [DOI] [PubMed] [Google Scholar]
  17. Mustafa M. G., King T. E. Wurster's blue mediated oxidation of NADH and phosphorylation in mitochondria. Arch Biochem Biophys. 1967 Nov;122(2):501–508. doi: 10.1016/0003-9861(67)90225-1. [DOI] [PubMed] [Google Scholar]
  18. Müller P. P., Reif M. K., Zonghou S., Sengstag C., Mason T. L., Fox T. D. A nuclear mutation that post-transcriptionally blocks accumulation of a yeast mitochondrial gene product can be suppressed by a mitochondrial gene rearrangement. J Mol Biol. 1984 Jun 5;175(4):431–452. doi: 10.1016/0022-2836(84)90178-5. [DOI] [PubMed] [Google Scholar]
  19. Power S. D., Lochrie M. A., Sevarino K. A., Patterson T. E., Poyton R. O. The nuclear-coded subunits of yeast cytochrome c oxidase. I. Fractionation of the holoenzyme into chemically pure polypeptides and the identification of two new subunits using solvent extraction and reversed phase high performance liquid chromatography. J Biol Chem. 1984 May 25;259(10):6564–6570. [PubMed] [Google Scholar]
  20. Poyton R. O., Schatz G. Cytochrome c oxidase from bakers' yeast. III. Physical characterization of isolated subunits and chemical evidence for two different classes of polypeptides. J Biol Chem. 1975 Jan 25;250(2):752–761. [PubMed] [Google Scholar]
  21. Pratje E., Mannhaupt G., Michaelis G., Beyreuther K. A nuclear mutation prevents processing of a mitochondrially encoded membrane protein in Saccharomyces cerevisiae. EMBO J. 1983;2(7):1049–1054. doi: 10.1002/j.1460-2075.1983.tb01544.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Putrament A., Baranowska H., Ejchart A., Jachymczyk W. Manganese mutagenesis in yeast. VI. Mn2+ uptake, mitDNA replication and ER induction: comparison with other divalent cations. Mol Gen Genet. 1977 Feb 28;151(1):69–76. doi: 10.1007/BF00446914. [DOI] [PubMed] [Google Scholar]
  23. SHERMAN F. MUTANTS OF YEAST DEFICIENT IN CYTOCHROME C. Genetics. 1964 Jan;49:39–48. doi: 10.1093/genetics/49.1.39. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. SHERMAN F. Respiration-deficient mutants of yeast. I. Genetics. Genetics. 1963 Mar;48:375–385. doi: 10.1093/genetics/48.3.375. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Simon M., Faye G. Steps in processing of the mitochondrial cytochrome oxidase subunit I pre-mRNA affected by a nuclear mutation in yeast. Proc Natl Acad Sci U S A. 1984 Jan;81(1):8–12. doi: 10.1073/pnas.81.1.8. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Thalenfeld B. E., Tzagoloff A. Assembly of the mitochondrial membrane system. Sequence of the oxi 2 gene of yeast mitochondrial DNA. J Biol Chem. 1980 Jul 10;255(13):6173–6180. [PubMed] [Google Scholar]
  27. Tzagoloff A., Akai A., Needleman R. B. Assembly of the mitochondrial membrane system. Characterization of nuclear mutants of Saccharomyces cerevisiae with defects in mitochondrial ATPase and respiratory enzymes. J Biol Chem. 1975 Oct 25;250(20):8228–8235. [PubMed] [Google Scholar]
  28. Tzagoloff A., Akai A., Needleman R. B. Assembly of the mitochondrial membrane system: isolation of nuclear and cytoplasmic mutants of Saccharomyces cerevisiae with specific defects in mitochondrial functions. J Bacteriol. 1975 Jun;122(3):826–831. doi: 10.1128/jb.122.3.826-831.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]

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