Abstract
Repair of ultraviolet-irradiated transforming deoxyriboinucleic acid (DNA) in several strains of Bacillus subtilis was studied in order to determine the effects of excision repair and postreplication repair on transformation. Two mutations that cause a Uvr- and phenotype (uvr-1 and uvr-42) were shown to have strikingly different effects on repair of ultraviolet-irradiated transforming DNA. Genetic and kinetic evidence is presented to show that integrated DNA was apparently repaired by both excision and postreplication repair in wild-type and in uvr-1 recipients, although the latter excise pyrimidine dimers very slowly. In uvr-42 mutants, which are defective in incision at pyrimidine dimers, dimer-containing DNA was integrated. Postreplication repair apparently saved uvr-42 recipient cells from the lethal effects of integrated dimers, but the recombination events accompanying postreplication repair greatly reduced the linkage between closely linked genetic markers in the donor DNA. Repair of transforming DNA in a recG recipient, which does excision repair but not postreplication repair, was nearly as efficient as in wild-type cells. However, in this recipient linkage was altered only slightly, if at all, compared with wild-type cells. The apparent reduction in size of integrated regions of ultraviolet-irradiation transforming DNA probably results mainly from postreplication repair of larger integrated regions.
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Selected References
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- Beattie K. L., Setlow J. K. Killing of Haemophilus influenzae cells by integrated ultraviolet-induced lesions from transforming deoxyribonucleic acid. J Bacteriol. 1969 Dec;100(3):1284–1288. doi: 10.1128/jb.100.3.1284-1288.1969. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Billen D., Carreira L. B., Hadden C. T., Silverstein S. J. Evidence suggestive of compartmentalization of deoxyribonucleic acid-synthesizing systems in freeze-treated Bacillus subtilis. J Bacteriol. 1971 Dec;108(3):1250–1256. doi: 10.1128/jb.108.3.1250-1256.1971. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bresler S. E., Kalinin V. L., Perumov D. A. Inactivation and mutagenesis on isolated DNA. I. Theory of inactivation of transforming DNA. Mutat Res. 1967 Jul-Aug;4(4):389–398. doi: 10.1016/0027-5107(67)90001-2. [DOI] [PubMed] [Google Scholar]
- Bresler S. E., Kalinin V. L., Perumov D. A. Inactivation and mutagenesis on isolated DNA. Iv. Possibility of integration of lethal damage into the chromosome of Bacillus subtillis during transformation. Mutat Res. 1968 May-Jun;5(3):329–341. doi: 10.1016/0027-5107(68)90003-1. [DOI] [PubMed] [Google Scholar]
- Bron S., Venema G. Ultraviolet inactivation and excision-repair in Bacillus subtilis. II. Differential inactivation and differential repair of transforming markers. Mutat Res. 1972 May;15(1):11–22. doi: 10.1016/0027-5107(72)90087-5. [DOI] [PubMed] [Google Scholar]
- Bron S., Venema G. Ultraviolet inactivation and excision-repair in Bacillus subtilis. IV. Integration and repair of ultraviolet-inactivated transforming DNA. Mutat Res. 1972 Aug;15(4):395–409. doi: 10.1016/0027-5107(72)90004-8. [DOI] [PubMed] [Google Scholar]
- Carrier W. L., Setlow R. B. Endonuclease from Micrococcus luteus which has activity toward ultraviolet-irradiated deoxyribonucleic acid: purification and properties. J Bacteriol. 1970 Apr;102(1):178–186. doi: 10.1128/jb.102.1.178-186.1970. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dodson L. A., Hadden C. T. Capacity for postreplication repair correlated with transducibility in Rec- mutants of Bacillus subtilis. J Bacteriol. 1980 Nov;144(2):608–615. doi: 10.1128/jb.144.2.608-615.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dodson L. A., Hadden C. T. Postreplication repair of deoxyribonucleic acid and daughter strand exchange in uvr- mutants of Bacillus subtilis. J Bacteriol. 1980 Nov;144(2):840–843. doi: 10.1128/jb.144.2.840-843.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dooley D. C., Hadden C. T., Nester E. W. Macromolecular synthesis in Bacillus subtilis during development of the competent state. J Bacteriol. 1971 Nov;108(2):668–679. doi: 10.1128/jb.108.2.668-679.1971. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dubnau D., Cirigliano C. Fate of transforming deoxyribonucleic acid after uptake by competent Bacillus subtilis: size and distribution of the integrated donor segments. J Bacteriol. 1972 Aug;111(2):488–494. doi: 10.1128/jb.111.2.488-494.1972. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dubnau D., Davidoff-Abelson R., Scher B., Cirigliano C. Fate of transforming deoxyribonucleic acid after uptake by competent Bacillus subtilis: phenotypic characterization of radiation-sensitive recombination-deficient mutants. J Bacteriol. 1973 Apr;114(1):273–286. doi: 10.1128/jb.114.1.273-286.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ganesan A. K. A method for detecting pyrimidine dimers in the DNA of bacteria irradiated with low doses of ultraviolet light. Proc Natl Acad Sci U S A. 1973 Oct;70(10):2753–2756. doi: 10.1073/pnas.70.10.2753. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ganesan A. K. Persistence of pyrimidine dimers during post-replication repair in ultraviolet light-irradiated Escherichia coli K12. J Mol Biol. 1974 Jul 25;87(1):103–119. doi: 10.1016/0022-2836(74)90563-4. [DOI] [PubMed] [Google Scholar]
- Ganesan A. K., Seawell P. C. The effect of lexA and recF mutations on post-replication repair and DNA synthesis in Escherichia coli K-12. Mol Gen Genet. 1975 Dec 1;141(3):189–205. doi: 10.1007/BF00341799. [DOI] [PubMed] [Google Scholar]
- Hadden C. T., Billen D. Genetic analysis of repair of ultraviolet damage by competent and noncompetent cells of Bacillus subtilis. J Bacteriol. 1973 Jan;113(1):88–95. doi: 10.1128/jb.113.1.88-95.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hadden C. T. Gap-filling repair synthesis induced by ultraviolet light in a Bacillus subtilis Uvr- mutant. J Bacteriol. 1979 Jul;139(1):239–246. doi: 10.1128/jb.139.1.239-246.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hadden C. T. Measurement of pyrimidine dimers in spheroplasts of Bacillus subtilis. Microbios. 1979;24(96):113–122. [PubMed] [Google Scholar]
- Hadden C. T. Postirradiation recovery dependent on the uvr-1 locus in Bacillus subtilis. J Bacteriol. 1976 Oct;128(1):317–324. doi: 10.1128/jb.128.1.317-324.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hadden C. T. Pyrimidine dimer excision in a Bacillus subtilis Uvr- mutant. J Bacteriol. 1979 Jul;139(1):247–255. doi: 10.1128/jb.139.1.247-255.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Harm H. Dependence of the U.V. survival of transforming DNA on the amount of DNA uptake per cell. Mol Gen Genet. 1970;107(1):71–84. doi: 10.1007/BF00433225. [DOI] [PubMed] [Google Scholar]
- Hoch J. A., Anagnostopoulos C. Chromosomal location and properties of radiation sensitivity mutations in Bacillus subtilis. J Bacteriol. 1970 Aug;103(2):295–301. doi: 10.1128/jb.103.2.295-301.1970. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Leclerc J. E., Setlow J. K. Postreplication repair of ultraviolet damage in Haemophilus influenzae. J Bacteriol. 1972 Jun;110(3):930–934. doi: 10.1128/jb.110.3.930-934.1972. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lederberg J. SIBLING RECOMBINANTS IN ZYGOTE PEDIGREES OF ESCHERICHIA COLI. Proc Natl Acad Sci U S A. 1957 Dec 15;43(12):1060–1065. doi: 10.1073/pnas.43.12.1060. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lehmann A. R., Bridges B. A. DNA repair. Essays Biochem. 1977;13:71–119. [PubMed] [Google Scholar]
- McCarthy C., Nester E. W. Macromolecular synthesis in newly transformed cells of Bacillus subtilis. J Bacteriol. 1967 Jul;94(1):131–140. doi: 10.1128/jb.94.1.131-140.1967. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Munakata N., Ikeda Y. Inactivation of transforming DNA by ultraviolet irradiation: a study with ultraviot-sensitive mutants of Bacillus subtilis. Mutat Res. 1969 Mar-Apr;7(2):133–139. doi: 10.1016/0027-5107(69)90025-6. [DOI] [PubMed] [Google Scholar]
- NESTER E. W., STOCKER B. A. BIOSYNTHETIC LATENCY IN EARLY STAGES OF DEOXYRIBONUCLEIC ACIDTRANSFORMATION IN BACILLUS SUBTILIS. J Bacteriol. 1963 Oct;86:785–796. doi: 10.1128/jb.86.4.785-796.1963. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nester E W, Schafer M, Lederberg J. Gene Linkage in DNA Transfer: A Cluster of Genes Concerned with Aromatic Biosynthesis in Bacillus Subtilis. Genetics. 1963 Apr;48(4):529–551. doi: 10.1093/genetics/48.4.529. [DOI] [PMC free article] [PubMed] [Google Scholar]
- SETLOW R. B., SETLOW J. K. Evidence that ultraviolet-induced thymine dimers in DNA cause biological damage. Proc Natl Acad Sci U S A. 1962 Jul 15;48:1250–1257. doi: 10.1073/pnas.48.7.1250. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Setlow J. K., Randolph M. L., Boling M. E., Mattingly A., Price G., Gordon M. P. Repair of DNA in Haemophilus influenzae. II. Excision, repair of single-strand breaks, defects in transformation, and host cell modification in UV-sensitive mutants. Cold Spring Harb Symp Quant Biol. 1968;33:209–218. doi: 10.1101/sqb.1968.033.01.024. [DOI] [PubMed] [Google Scholar]
- Setlow J. K. The shape of the ultraviolet inactivation curve for transforming DNA. Nature. 1977 Jul 14;268(5616):169–170. doi: 10.1038/268169a0. [DOI] [PubMed] [Google Scholar]
- Waldstein E., Setlow J. K., Santasier L. A special type of UV-stimulated recombination in Haemophilus influenzae. Cold Spring Harb Symp Quant Biol. 1979;43(Pt 2):1059–1062. doi: 10.1101/sqb.1979.043.01.115. [DOI] [PubMed] [Google Scholar]
