Skip to main content
Journal of Bacteriology logoLink to Journal of Bacteriology
. 1978 Nov;136(2):708–713. doi: 10.1128/jb.136.2.708-713.1978

Restriction endonucleases: general survey procedure and survey of gliding bacteria.

H Mayer, H Reichenbach
PMCID: PMC218597  PMID: 101530

Abstract

Among 120 strains of gliding bacteria which were screened for restriction endonucleases, 27 were found positive. Additionally, three strains carried enzymes able to release the supercoiled state of closed circular DNA. By using a new rapid method, restriction endonuclease activity was released by stirring about 0.5 g of cells (fresh weight) in a motor-driven glass homogenizer in buffer containing Triton X-101, ethylenediaminetetraacetic acid, and mercaptoethanol. A yield from 60 to 80% of the total activity present in the cells was obtained with minimal destruction of the cells. The enzyme activity in the crude extract was measured semi-quantitatively by digestion of DNA and subsequent separation of the fragments on an agarose slab gel. The method appears to be generally applicable for the extraction of restriction endonucleases from gram-negative bacteria on an analytical scale and in a modified form for large-scale preparation of restriction enzymes.

Full text

PDF
708

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Arber W. DNA modification and restriction. Prog Nucleic Acid Res Mol Biol. 1974;14(0):1–37. doi: 10.1016/s0079-6603(08)60204-4. [DOI] [PubMed] [Google Scholar]
  2. Bauer W. R., Ressner E. C., Kates J., Patzke J. V. A DNA nicking-closing enzyme encapsidated in vaccinia virus: partial purification and properties. Proc Natl Acad Sci U S A. 1977 May;74(5):1841–1845. doi: 10.1073/pnas.74.5.1841. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Boyer H. W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol. 1969 May 14;41(3):459–472. doi: 10.1016/0022-2836(69)90288-5. [DOI] [PubMed] [Google Scholar]
  4. Bron S., Murray K., Trautner T. A. Restriction and modification in B. subtilis. Purification and general properties of a restriction endonuclease from strain R. Mol Gen Genet. 1975 Dec 30;143(1):13–23. doi: 10.1007/BF00269416. [DOI] [PubMed] [Google Scholar]
  5. Champoux J. J., Dulbecco R. An activity from mammalian cells that untwists superhelical DNA--a possible swivel for DNA replication (polyoma-ethidium bromide-mouse-embryo cells-dye binding assay). Proc Natl Acad Sci U S A. 1972 Jan;69(1):143–146. doi: 10.1073/pnas.69.1.143. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Chang S., Cohen S. N. In vivo site-specific genetic recombination promoted by the EcoRI restriction endonuclease. Proc Natl Acad Sci U S A. 1977 Nov;74(11):4811–4815. doi: 10.1073/pnas.74.11.4811. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Goebel W., Bonewald R. Class of small multicopy plasmids originating from the mutant antibiotic resistance factor R1 drd-19B2. J Bacteriol. 1975 Aug;123(2):658–665. doi: 10.1128/jb.123.2.658-665.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Hartmann H., Goebel W. A new restriction enzyme from Enterobacter cloacae (EclI). FEBS Lett. 1977 Aug 15;80(2):285–287. doi: 10.1016/0014-5793(77)80458-4. [DOI] [PubMed] [Google Scholar]
  9. Keller W. Characterization of purified DNA-relaxing enzyme from human tissue culture cells. Proc Natl Acad Sci U S A. 1975 Jul;72(7):2550–2554. doi: 10.1073/pnas.72.7.2550. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Lees N. D., Welker N. E. Restriction and modification of bacteriophage in Bacillus stearothermophilus. J Virol. 1973 Apr;11(4):606–609. doi: 10.1128/jvi.11.4.606-609.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Mayer H., Luibrand G., Goebel W. Replication of the mini-R1 plasmid Rsc11 and Rsc11 hybrid plasmids. Mol Gen Genet. 1977 Apr 29;152(3):145–152. doi: 10.1007/BF00268811. [DOI] [PubMed] [Google Scholar]
  12. Meselson M., Yuan R., Heywood J. Restriction and modification of DNA. Annu Rev Biochem. 1972;41:447–466. doi: 10.1146/annurev.bi.41.070172.002311. [DOI] [PubMed] [Google Scholar]
  13. Morris D. W., Parish J. H. Restriction in Myxococcus virescens. Arch Microbiol. 1976 Jun;108(2):227–230. doi: 10.1007/BF00428956. [DOI] [PubMed] [Google Scholar]
  14. Nathans D., Smith H. O. Restriction endonucleases in the analysis and restructuring of dna molecules. Annu Rev Biochem. 1975;44:273–293. doi: 10.1146/annurev.bi.44.070175.001421. [DOI] [PubMed] [Google Scholar]
  15. Neu H. C., Heppel L. A. The release of enzymes from Escherichia coli by osmotic shock and during the formation of spheroplasts. J Biol Chem. 1965 Sep;240(9):3685–3692. [PubMed] [Google Scholar]
  16. Roberts R. J. Restriction endonucleases. CRC Crit Rev Biochem. 1976 Nov;4(2):123–164. doi: 10.3109/10409237609105456. [DOI] [PubMed] [Google Scholar]
  17. Roulland-Dussoix D., Boyer H. W. The Escherichia coli B restriction endonuclease. Biochim Biophys Acta. 1969 Nov 19;195(1):219–229. doi: 10.1016/0005-2787(69)90618-2. [DOI] [PubMed] [Google Scholar]
  18. Smith D. I., Blattner F. R., Davies J. The isolation and partial characterization of a new restriction endonuclease from Providencia stuartii. Nucleic Acids Res. 1976 Feb;3(2):343–353. doi: 10.1093/nar/3.2.343. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Vosberg H. P., Grossman L. I., Vinograd J. Isolation and partial characterisation of the relaxation protein from nuclei of cultured mouse and human cells. Eur J Biochem. 1975 Jun 16;55(1):79–93. doi: 10.1111/j.1432-1033.1975.tb02140.x. [DOI] [PubMed] [Google Scholar]
  20. Wang J. C. Interaction between DNA and an Escherichia coli protein omega. J Mol Biol. 1971 Feb 14;55(3):523–533. doi: 10.1016/0022-2836(71)90334-2. [DOI] [PubMed] [Google Scholar]
  21. Wilson G. A., Young F. E. Isolation of a sequence-specific endonuclease (BamI) from Bacillus amyloliquefaciens H. J Mol Biol. 1975 Sep 5;97(1):123–125. doi: 10.1016/s0022-2836(75)80028-3. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Bacteriology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES