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. 1982 Jul;151(1):186–192. doi: 10.1128/jb.151.1.186-192.1982

Effects of the ssb-1 and ssb-113 mutations on survival and DNA repair in UV-irradiated delta uvrB strains of Escherichia coli K-12.

T C Wang, K C Smith
PMCID: PMC220225  PMID: 7045074

Abstract

The molecular defect in DNA repair caused by ssb mutations (single-strand binding protein) was studied by analyzing DNA synthesis and DNA double-strand break production in UV-irradiated Escherichia coli delta uvrB strains. The presence of the ssb-113 mutation produced a large inhibition of DNA synthesis and led to the formation of double-strand breaks, whereas the ssb-1 mutation produced much less inhibition of DNA synthesis and fewer double-strand breaks. We suggest that the single-strand binding protein plays an important role in the replication of damaged DNA, and that it functions by protecting single-stranded parental DNa opposite daughter-strand gaps from nuclease attack.

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Selected References

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  1. Bachmann B. J., Low K. B. Linkage map of Escherichia coli K-12, edition 6. Microbiol Rev. 1980 Mar;44(1):1–56. doi: 10.1128/mr.44.1.1-56.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Baluch J., Chase J. W., Sussman R. Synthesis of recA protein and induction of bacteriophage lambda in single-strand deoxyribonucleic acid-binding protein mutants of Escherichia coli. J Bacteriol. 1980 Nov;144(2):489–498. doi: 10.1128/jb.144.2.489-498.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Bonura T., Smith K. C. Enzymatic production of deoxyribonucleic acid double-strand breaks after ultraviolet irradiation of Escherichia coli K-12. J Bacteriol. 1975 Feb;121(2):511–517. doi: 10.1128/jb.121.2.511-517.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Doudney C. O. Deoxyribonucleic acid replication in UV-damaged bacteria revisited. Mutat Res. 1971 Jun;12(2):121–128. doi: 10.1016/0027-5107(71)90133-3. [DOI] [PubMed] [Google Scholar]
  5. Ganesan A. K., Smith K. C. Dark recovery processes in Escherichia coli irradiated with ultraviolet light. I. Effect of rec mutations on liquid holding recovery. J Bacteriol. 1968 Aug;96(2):365–373. doi: 10.1128/jb.96.2.365-373.1968. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Glassberg J., Meyer R. R., Kornberg A. Mutant single-strand binding protein of Escherichia coli: genetic and physiological characterization. J Bacteriol. 1979 Oct;140(1):14–19. doi: 10.1128/jb.140.1.14-19.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Greenberg J., Berends L. J., Donch J., Green M. H. exrB: a malB-linked gene in Escherichia coli B involved in sensitivity to radiation and filament formation. Genet Res. 1974 Apr;23(2):175–184. doi: 10.1017/s0016672300014798. [DOI] [PubMed] [Google Scholar]
  8. Greenberg J., Berends L., Donch J., Johnson B. Reversion studies with exrB in Escherichia coli. Genet Res. 1975 Apr;25(2):109–117. doi: 10.1017/s0016672300015512. [DOI] [PubMed] [Google Scholar]
  9. Howard-Flanders P., Boyce R. P., Theriot L. Three loci in Escherichia coli K-12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics. 1966 Jun;53(6):1119–1136. doi: 10.1093/genetics/53.6.1119. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Howard-Flanders P. DNA repair. Annu Rev Biochem. 1968;37:175–200. doi: 10.1146/annurev.bi.37.070168.001135. [DOI] [PubMed] [Google Scholar]
  11. Johnson B. F. Genetic mapping of the lexC-113 mutation. Mol Gen Genet. 1977 Nov 29;157(1):91–97. doi: 10.1007/BF00268691. [DOI] [PubMed] [Google Scholar]
  12. Krasin F., Hutchinson F. Repair of DNA double-strand breaks in Escherichia coli cells requires synthesis of proteins that can be induced by UV light. Proc Natl Acad Sci U S A. 1981 Jun;78(6):3450–3453. doi: 10.1073/pnas.78.6.3450. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Krasin F., Hutchinson F. Repair of DNA double-strand breaks in Escherichia coli, which requires recA function and the presence of a duplicate genome. J Mol Biol. 1977 Oct 15;116(1):81–98. doi: 10.1016/0022-2836(77)90120-6. [DOI] [PubMed] [Google Scholar]
  14. Lieberman H. B., Witkin E. M. Variable expression of the ssb--1 allele in different strains of Escherichia coli K12 and B: differential suppression of its effects on DNA replication, DNA repair and ultraviolet mutagenesis. Mol Gen Genet. 1981;183(2):348–355. doi: 10.1007/BF00270639. [DOI] [PubMed] [Google Scholar]
  15. Meyer R. R., Glassberg J., Kornberg A. An Escherichia coli mutant defective in single-strand binding protein is defective in DNA replication. Proc Natl Acad Sci U S A. 1979 Apr;76(4):1702–1705. doi: 10.1073/pnas.76.4.1702. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Meyer R. R., Glassberg J., Scott J. V., Kornberg A. A temperature-sensitive single-stranded DNA-binding protein from Escherichia coli. J Biol Chem. 1980 Apr 10;255(7):2897–2901. [PubMed] [Google Scholar]
  17. Rupp W. D., Howard-Flanders P. Discontinuities in the DNA synthesized in an excision-defective strain of Escherichia coli following ultraviolet irradiation. J Mol Biol. 1968 Jan 28;31(2):291–304. doi: 10.1016/0022-2836(68)90445-2. [DOI] [PubMed] [Google Scholar]
  18. Rupp W. D., Wilde C. E., 3rd, Reno D. L., Howard-Flanders P. Exchanges between DNA strands in ultraviolet-irradiated Escherichia coli. J Mol Biol. 1971 Oct 14;61(1):25–44. doi: 10.1016/0022-2836(71)90204-x. [DOI] [PubMed] [Google Scholar]
  19. Scott J. F., Eisenberg S., Bertsch L. L., Kornberg A. A mechanism of duplex DNA replication revealed by enzymatic studies of phage phi X174: catalytic strand separation in advance of replication. Proc Natl Acad Sci U S A. 1977 Jan;74(1):193–197. doi: 10.1073/pnas.74.1.193. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Seeberg E. Reconstitution of an Escherichia coli repair endonuclease activity from the separated uvrA+ and uvrB+/uvrC+ gene products. Proc Natl Acad Sci U S A. 1978 Jun;75(6):2569–2573. doi: 10.1073/pnas.75.6.2569. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Shimada K., Ogawa H., Tomizawa J. Studies on radiation-sensitive mutants of E. coli. II. Breakage and repair of ultraviolet irradiated intracellular DNA of phage lambda. Mol Gen Genet. 1968 May 3;101(3):245–256. doi: 10.1007/BF00271626. [DOI] [PubMed] [Google Scholar]
  22. Smith K. C. DNA synthesis in sensitive and resistant mutants of Escherichia coli B after ultraviolet irradiation. Mutat Res. 1969 Nov-Dec;8(3):481–495. doi: 10.1016/0027-5107(69)90065-7. [DOI] [PubMed] [Google Scholar]
  23. Smith K. C., O'Leary M. E. The pitfalls of measuring DNA synthesis kinetics as exemplifed in ultraciolet radiation studies. Biochim Biophys Acta. 1968 Dec 17;169(2):430–438. doi: 10.1016/0005-2787(68)90051-8. [DOI] [PubMed] [Google Scholar]
  24. Tang M. S., Smith K. C. The effects of lexA101, recB21, recF143 and uvrD3 mutations on liquid-holding recovery in ultraviolet-irradiated Escherichia coli K12 recA56. Mutat Res. 1981 Jan;80(1):15–25. doi: 10.1016/0027-5107(81)90174-3. [DOI] [PubMed] [Google Scholar]
  25. Vales L. D., Chase J. W., Murphy J. B. Effect of ssbA1 and lexC113 mutations on lambda prophage induction, bacteriophage growth, and cell survival. J Bacteriol. 1980 Aug;143(2):887–896. doi: 10.1128/jb.143.2.887-896.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Weiner J. H., Bertsch L. L., Kornberg A. The deoxyribonucleic acid unwinding protein of Escherichia coli. Properties and functions in replication. J Biol Chem. 1975 Mar 25;250(6):1972–1980. [PubMed] [Google Scholar]
  27. Whittier R. F., Chase J. W. DNA repair in E. coli strains deficient in single-strand DNA binding protein. Mol Gen Genet. 1981;183(2):341–347. doi: 10.1007/BF00270638. [DOI] [PubMed] [Google Scholar]
  28. Wickner S., Hurwitz J. Conversion of phiX174 viral DNA to double-stranded form by purified Escherichia coli proteins. Proc Natl Acad Sci U S A. 1974 Oct;71(10):4120–4124. doi: 10.1073/pnas.71.10.4120. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Youngs D. A., Smith K. C. Genetic control of multiple pathways of post-replicational repair in uvrB strains of Escherichia coli K-12. J Bacteriol. 1976 Jan;125(1):102–110. doi: 10.1128/jb.125.1.102-110.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]

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