Abstract
The biogenesis of secretory IgM occurs stepwise under stringent quality control, formation of μ2L2 preceding polymerization. How is efficiency of IgM secretion coupled to fidelity? We show here that ERp44, a soluble protein involved in thiol-mediated retention, interacts with ERGIC-53. Binding to this hexameric lectin contributes to ERp44 localization in the ER-golgi intermediate compartment. ERp44 and ERGIC-53 increase during B-lymphocyte differentiation, concomitantly with the onset of IgM polymerization. Both preferentially bind μ2L2 and higher order intermediates. Their overexpression or silencing in non-lymphoid cells promotes or decreases secretion of IgM polymers, respectively. In IgM-secreting B-lymphoma cells, μ chains interact first with BiP and later with ERp44 and ERGIC-53. Our findings suggest that ERGIC-53 provides a platform that receives μ2L2 subunits from the BiP-dependent checkpoint, assisting polymerization. In this process, ERp44 couples thiol-dependent assembly and quality control.
Keywords: endoplasmic reticulum, ERGIC, IgM, protein folding, quality control
Introduction
Secreted and membrane proteins are translocated into the endoplasmic reticulum (ER), where they fold and undergo several modifications (disulfide bond formation, N-glycan processing and subunit assembly) whose execution must be properly coordinated and timed. Quality control (QC) mechanisms are active at the ER–Golgi interface to ensure that non-native molecules are retained in, or retrieved to, the ER, and eventually dispatched to the cytosol for proteasomal degradation (Ellgaard and Helenius, 2003; Sitia and Braakman, 2003). QC recognizes different features, common to unfolded or not completely assembled molecules, such as immature N-glycans (Helenius and Aebi, 2004), hydrophobic patches (Blond-Elguindi et al, 1993) or exposed reactive cysteines (thiol-mediated retention; Sitia et al, 1990; Fra et al, 1993; Reddy et al, 1996). We first isolated ERp44 for its ability of covalently binding the oxidases Ero1α and Ero1β (Anelli et al, 2002), thus determining their intracellular localization (Otsu et al, 2006). ERp44 plays a crucial role in QC, mediating via its Cys29 (Anelli et al, 2003), the thiol-dependent retention of immunoglobulin (Ig) subunits (e.g., μ, L and J chains) and adiponectin (Wang et al, 2007). ERp44 also regulates the activity of the calcium channel IP3R1 (Higo et al, 2005), emerging as a possible integrator of redox and calcium homeostasis.
In addition to bulk flow (Wieland et al, 1987), the exit of proteins from the ER is regulated by intracellular lectins, which concentrate certain glycoproteins in forward transport vesicles (Hauri et al, 2002). Among these, ERGIC-53 is a hexameric transmembrane protein of the ER–Golgi intermediate compartment (ERGIC) (Schindler et al, 1993), which binds glycoproteins in the ER, transporting and releasing them in the Golgi (Hauri et al, 2002). ERGIC-53 shuttles between the ER and the Golgi because it can bind both COPI and COPII through its KKFF cytosolic terminus (Schindler et al, 1993; Vollenweider et al, 1998). Mutations in ERGIC-53 (also known as LMAN1) are responsible for most cases of combined deficiency of coagulation factor V and VIII (F5F8D), a recessive bleeding disorder caused by decreased blood levels of both clotting factors (Nichols et al, 1998; Neerman-Arbez et al, 1999). This implies a role for ERGIC-53 in factors V and VIII ER–Golgi transport (Vollenweider et al, 1998). Other F5F8D cases are linked to mutations in MCFD2 (Zhang et al, 2003), a small soluble protein mediating ERGIC-53 binding to factor VIII (Zhang et al, 2005). We recently demonstrated that ERGIC-53 binds mutant Ig-μ chains lacking the BiP-binding first constant domain (μΔCH1) (Mattioli et al, 2006). This interaction favors formation of detergent-insoluble μΔCH1 aggregates, an event that requires Cys575-dependent polymerization (Valetti et al, 1991).
IgM polymers are planar, multimeric proteins. They consist of 21 or 24 subunits, depending on whether they are secreted as J-chain containing ‘pentamers' ((μ2L2)5-J) or ‘hexamers' ((μ2L2)6) (where μ and L stand for IgM heavy and light chains, respectively). In secreted polymers, individual μ2L2 subunits (often called ‘monomers' in the immunological jargon) are assembled via disulfide bonds involving Cys575 in the C-terminal tailpiece of secretory μ (μs) chains (Davis et al, 1989b; Sitia et al, 1990). Cys575 acts also as a retention and degradation signal for unpolymerized secretory IgM (thiol-mediated retention; Fra et al, 1993; Reddy et al, 1996). In membrane μ (μm) chains, this 20-residue tailpiece is replaced by a longer hydrophobic segment, essential for membrane insertion and assembly with B-cell receptor signaling components.
The first assembly step (μ2L2 formation), common to both membrane and secreted IgM, is fast and efficient in both B and plasma cells (PCs): its fidelity is checked by BiP (see Hendershot and Sitia, 2005 and references therein). In contrast, IgM polymerization is slow and occurs only in PCs. As a result, most μs chains are degraded by proteasomes in B lymphocytes (Shachar et al, 1992), whereas μm chains that negotiated assembly into functional B-cell receptors are transported to the cell surface (Sitia et al, 1987; Hombach et al, 1988).
Therefore, secretory IgM biogenesis occurs in at least two sequential and independently regulated steps, μ-L assembly preceding polymerization (Hendershot and Sitia, 2005). We asked whether these two steps are executed in different subregions of the early secretory pathway, so as to optimize and couple assembly, QC and transport. We show that PDI and ERp44, two soluble proteins endowed with ER-localization motifs, are differentially distributed. Although PDI is localized in the ER, ERp44 accumulates in ERGIC and cis-Golgi vesicles. ERp44 and ERGIC-53 interact with each other and, together with MCFD2, are induced during B to PC differentiation. Both ERp44 and ERGIC-53 bind μ chains, preferentially if assembled with L chains. Their overexpression and silencing stimulate and decrease IgM polymerization in non-lymphoid cells, respectively. We propose that hexameric ERGIC-53 provides, with the help of MCFD2 and ERp44, a platform for IgM polymerization, receiving μ2L2 subunits that have already passed the BiP-dependent checkpoint. By spatially segregating the sequential execution of μ2L2 assembly and polymerization, IgM-secreting cells can couple assembly, transport and QC, ensuring efficiency and fidelity in the protein factory.
Results
Endogenous ERp44 is enriched in the ERGIC and extends to cis-Golgi vesicles
Using specific monoclonal antibodies, we found that only a small fraction of endogenous ERp44 co-distributes with the ER markers CRT and PDI (Figure 1A and B). Most of it accumulated distally, yielding intense co-staining with p115 and ERGIC-53 (panels C and D), and to a lesser extent with giantin (panel E). No colocalization at all was observed with EEA1, a marker of early endosomes, confirming the specificity of the immunofluorescence assays (panel F). Therefore, endogenous ERp44 is localized primarily in the ERGIC and cis-Golgi, and only to a minor extent in the ER of human HeLa, murine 3T3 (Figure 1G and H; Supplementary Figure S1) and primary B cells (Figure 7D).
What mechanisms could localize ERp44 distally with respect to PDI? The proposal that soluble ER-resident proteins form a functional matrix that could restrict their exit to the Golgi (Munro and Pelham, 1986; Reddy et al, 1996), has been supported by the identification of complexes containing BiP, grp94 and PDI (Meunier et al, 2002). If the more distal localization of ERp44 reflected a lower affinity for such ER complexes, removal of the ER localization signal should allow ERp44 to be secreted more easily than other resident proteins. Accordingly, although the majority of PDIΔKDEL was still retained intracellularly within 2 h of chase, most labeled ERp44ΔRDEL was in the culture supernatant (Figure 2). The loss of some radioactive signal during the chase may reflect degradation, inaccessibility or post-translational cleavage of the N-terminal HA tag in late compartments of the exocytic route. In accord with its downstream localization, ERp44 could reach the extracellular space more rapidly than PDI. On the other hand, the observation that overexpressed ERp44 accumulates in the ER (Anelli et al, 2002) independently from the presence of an N-terminal tag (Supplementary Figure S1) suggests saturation of forward transport system(s).
ERp44 interacts with ERGIC-53
ERp44 localization could also reflect interactions with molecules favoring ER exit. Because both ERp44 and ERGIC-53 bind μΔCH1 chains (Anelli et al, 2003; Mattioli et al, 2006) and colocalize (Figure 1), we hypothesized that ERp44 interacts with ERGIC-53. HeLa cells were thus co-transfected with HA-ERp44 and a glycosylated myc-tagged ERGIC-53 (GM ERGIC-53; Figure 3A), and crosslinked with DSP. Anti-HA antibodies efficiently and specifically immunoprecipitated (IP) exogenous ERp44 (compare whole lysates (lys) and left overs (LO), lanes 1–10). Not only GM ERGIC-53 but also endogenous ERGIC-53 (recognizable by its higher mobility) was co-IP with ERp44 (lane 12). The absence of signal in mock-transfected cells (lane 11) confirmed the specificity of the observed co-immunoprecipitation (see also Figure 6 below for further controls). To investigate whether the interactions between ERp44 and ERGIC-53 depend on, or are stabilized by, cargo molecules, we analyzed the active site mutants HA-ERp44 C29S (Anelli et al, 2003) and GM ERGIC-53 N156A (Itin et al, 1996). The N156A mutation had only a slight effect on the interaction (lane 14), possibly because inactive molecules can form hetero-hexamers with wild-type (wt) endogenous ERGIC-53. In contrast, replacing Cys29 in ERp44 drastically decreased the levels of co-immunoprecipitation (lane 13). Nonetheless, some ERGIC-53 N156A molecules were co-IP with ERp44 C29S (lane 15), suggesting that the two proteins can establish direct interactions. The detection of endogenous ERp44–ERGIC-53 complexes (Figure 3B, lane 3) excluded that the observed interactions were due to overexpression or ectopic localization. Altogether, these findings indicated that ERp44 and ERGIC-53 interact with each other, and that the interaction could be stabilized by binding to common substrate(s).
ERGIC-53 modulates ERp44 localization in the early secretory pathway
To demonstrate an active role of ERGIC-53 in determining ERp44 localization, we used an ERGIC-53 mutant (KKAA) that—owing to the replacement of the phenylalanines mediating COPII binding—is mainly localized in the ER. The KKAA mutant also recruits endogenous ERGIC-53, as well as its partner MCFD2, into the ER (Vollenweider et al, 1998; Nyfeler et al, 2006). If indeed ERp44 localization depended on interactions with ERGIC-53, endogenous ERp44 molecules would be enriched in the ER in the presence of KKAA. Accordingly, overexpression of ERGIC-53 KKAA by transient transfection (Figure 4A, panels d–f) or by tetracycline removal in a stable inducible cell line (Supplementary Figure S2, panel b) redistributed endogenous ERp44 in the ER, as indicated by its more diffuse pattern and its higher colocalization with CRT.
These findings suggested that ERGIC-53 can bind ERp44 and dictate its subcellular localization. Accordingly, ERGIC-53 silencing delocalized ERp44 in the ER (Supplementary Figure S3). Moreover, ERp44ΔRDEL remains longer intracellularly when ERGIC-53 (wt or the mutant KKAA) is overexpressed (Figure 4B and C); opposite effects are induced by ERGIC-53 silencing (Figure 4D). These effects were not due to stress induced by silencing or transfection, as no UPR activation was evident (Supplementary Figure S4).
ERp44 and ERGIC-53 stimulate IgM polymerization
Because ERGIC-53 forms hexamers (Neve et al, 2005; Nyfeler et al, 2006) and interacts with μΔCH1 (Mattioli et al, 2006), we reasoned that ERGIC-53 could promote IgM polymerization by concentrating μ2L2 subunits and possibly arranging them in a suitable orientation on the plane of the membrane. ERp44 could help this process as part of the polymerization complex, or indirectly by retaining unassembled subunits. To test this model, we tried to reconstitute the ‘polymerization machinery' in HeLa cells that are incompetent in IgM polymerization. Cells were transiently transfected with Ig μs and λ chains, alone or in various combinations of ERp44 and/or wt or mutant ERGIC-53. Secreted glycoproteins were concentrated by ConA precipitation, resolved on non-reducing SDS–PAGE and immunoblotted with anti-μ, to analyze secretion and polymerization efficiency. The latter was expressed as the percentage of secreted polymers with respect to total anti-μ-reactive species present in the supernatants. LDH release was monitored to exclude cell death or artifactual IgM release (Supplementary Figure S5).
Owing to weak thiol-dependent retention (Anelli et al, 2003; Otsu et al, 2006), HeLa cells mainly secreted μ2λ2 subunits: μλ and polymers were released in smaller amounts (Figure 5A, lane 2). The overexpression of active ERGIC-53 (wt or KKAA mutant) significantly increased both secretion and polymerization (lanes 3 and 4). In contrast, the inactive N156A mutant stimulated secretion but inhibited polymer formation (lane 5). In agreement with its role in thiol-mediated retention, ERp44 overexpression (alone or in combination with ERGIC-53 wt, lanes 6 and 7, respectively) inhibited μ2λ2 secretion and increased polymerization, without affecting the overall secretion. Conversely, silencing either ERGIC-53 or ERp44 (Figure 5B, lanes 4 and 5) inhibited IgM polymerization, the effects being maximal when both proteins were downregulated (lane 6). Coexpression of MCFD2—a soluble protein necessary for ERGIC-53 interaction with factors V and VIII (Zhang et al, 2003)—further increased the promoting activity of ERGIC-53 on IgM polymerization (panel C). These results indicated that ERGIC-53, MCFD2 and ERp44 promote IgM polymerization in HeLa cells.
ERGIC-53 interacts preferentially with partially assembled IgM subunits
To optimize the multistep processes of polymerization and QC of the IgM factory, subunits that have completed assembly with L chains (i.e., μ2λ2) should preferentially reach the polymerization machinery. By binding to the unpaired first constant (CH1) domain (Hendershot and Sitia, 2005), BiP might prevent unassembled μ and μ2 to engage in futile polymerization efforts. Therefore, ERGIC-53 should bind better to μ2L2 or higher order assemblies. Accordingly, more μ was co-IP by anti-ERGIC-53 or anti-ERp44 when also λ was present (compare lanes 2 and 3; Figure 6A), despite similar amounts were detected in the lysates before immunoprecipitation (upper panels). Noteworthy, some endogenous ERGIC-53 was also co-IP with ERp44 in these conditions. The interaction, detectable without previous crosslinking and in the presence of a mild detergent, was specific, as no ERGIC-53 could be precipitated by anti-HA (Figure 6A, bottom panel). To analyze better ERp44- and ERGIC-53-binding preferences, IP samples were also resolved under non-reducing conditions (Figure 6B). In cells expressing both μ and λ, mainly μ2λ2 and higher order assemblies were captured by anti-ERGIC-53, despite μ, μ2 and particularly μλ intermediates were easily detectable in the lysates (compare lanes 4 and 6). Two main μ-containing complexes were detected in the anti-ERp44 immunoprecipitations: μ2λ2 and a slower migrating species (indicated by an asterisk), which contained μ2λ2–ERp44 mixed disulfides (Supplementary Figure S6). Some covalent μλ–ERp44 complexes were detected (lane 2, see ° and Supplementary Figure S6). Little if any μλ was isolated with ERGIC-53 (lane 4), despite the prevalence of these species in the lysates (lane 6).
These results indicated that ERp44 preferentially binds to unassembled μλ and μ2λ2, whereas ERGIC-53 interacts with μ2λ2 and higher order assemblies.
ERGIC-53 and ERp44 in B-cell differentiation
If ERp44, ERGIC-53 and MCFD2 were involved in IgM polymerization, their levels should increase during B-cell differentiation. This was clearly the case in both LPS-stimulated murine I.29μ+ B-lymphoma cells (van Anken et al, 2003; Romijn et al, 2005) and primary splenocytes (Figure 7A and B, respectively). ERGIC-53, ERp44 and MCFD2 sharply increased at days 3 and 4 of differentiation, when polymerization ensues (Figure 7C). Real-time PCR analyses of LPS-stimulated primary splenocytes confirmed that ERp44, ERGIC-53 and MCFD2 mRNAs accumulated concomitantly with the increase in Ig-μ transcripts (Supplementary Figure S7). Despite its abundance in activated splenocytes, little ERp44 localized in the ER (Figure 7D), being instead enriched in perinuclear and peripheral vesicles, containing giantin and ERGIC-53, respectively.
The above findings are consistent with ERp44 and ERGIC-53 assisting IgM polymerization also in B cells. To further confirm this, we sought to verify if the distal distribution of ERp44 with respect to ER markers in B cells (Figure 7D, and our unpublished results) corresponded to delayed interactions of newly made μ chains with ERp44 (and ERGIC-53) as they assemble into secretion competent polymers. Therefore, we investigated the dynamic associations of μ chains with BiP, ERp44 and ERGIC-53 performing pulse–chase assays in the human Burkitt lymphoma line Ramos (Figure 7E and F). In these cells, polymers were first detected intracellularly after 10 min of chase, and later in the supernatants. The levels of μ co-immunoprecipitation by anti-BiP antibodies decreased during the first 20 min of chase. The increase observed at the last point of chase (30 min) may reflect the onset of degradation of unpolymerized subunits as often observed in B-cell lines (Amitay et al, 1991). In contrast, the interactions with ERp44 and ERGIC-53 increased after the pulse, preceding the detection of intracellular polymers. These data are consistent with μ chains establishing sequential interactions with different chaperones during the stepwise IgM polymerization in a B-cell line.
Discussion
The KDEL motif has long been thought as an ER localization device for soluble proteins. We show here a differential distribution of proteins endowed with such a motif, which reveals a further level of compartmentalization in the early secretory pathway: this could provide a novel mechanism that couples efficiency and fidelity in the IgM factory.
The peculiar subcellular distribution of ERp44
Our data show that, in both lymphoid and non-lymphoid cells, endogenous ERp44 is found downstream of traditional ER markers, concentrating in the ERGIC (Figure 1 and Supplementary Figure S1; Gilchrist et al, 2006; Wang et al, 2007). How is ERp44 localization determined? The concept that certain ER-resident proteins form complexes that assist the folding of incoming cargoes and impede faulty products to proceed further along the assembly line is gaining support (Meunier et al, 2002). Therefore, either for an unfolded substrate or a functional partner, interactions with large complexes can prevent forward transport and retain/concentrate the protein in an environment suitable for maturation or function. ERp44 is not part of these complexes (Meunier et al, 2002). Accordingly, when its ER retrieval motif is removed, ERp44 is secreted more rapidly and efficiently than the corresponding PDI mutant (Figure 2).
The ERp44–ERGIC-53 liaison
The localization of ERp44 also reflects its capability of interacting with ERGIC-53. Although most evident in transfectants overexpressing tagged molecules, co-immunoprecipitation can also be detected between the endogenous counterparts and without crosslinking (Figures 3B and 6A). Interestingly, the interaction is weaker between mutants in the active sites: the replacement of Cys29 in ERp44 (Anelli et al, 2003) has stronger effects than inactivating ERGIC-53 (Itin et al, 1996), perhaps because the N156A-ERGIC-53 mutant can form hetero-hexamers with endogenous wt molecules that retain some lectin activity. These observations indicate that ERp44 and ERGIC-53 establish weak reversible interactions, which can be stabilized by binding to common substrates.
Strong evidence for a physiological interaction between ERGIC-53 and ERp44 stems from delocalization assays. The ER-localized KKAA ERGIC-53 mutant recruited endogenous ERp44 in this compartment and influenced ERp44ΔRDEL release (Figure 4 and Supplementary Figure S2). Also the levels of wt ERGIC-53 correlated with ERp44ΔRDEL secretion (Figure 4) and endogenous ERp44 localization (Supplementary Figure S3). Besides excluding artifacts caused by cell lysis, crosslinking or immunoprecipitation, these results demonstrate that binding to ERGIC-53 occurs in physiological conditions and is important for ERp44 localization. Nonetheless, some ERp44 is found in the ERGIC of the KKAA transfectants (data not shown), which lack detectable ERGIC-53 in this compartment (Vollenweider et al, 1998 and our unpublished results). In the absence of forward-moving ERGIC-53, ERp44 could reach the ERGIC by bulk transport or, alternatively, interacting with additional escort proteins (Hauri et al, 2002).
Why does exogenous ERp44 accumulate in the ER? The possibility that overexpressed molecules fail to fold and become a substrate of ER-QC is unlikely, as suggested by the secretion of ERp44ΔRDEL. More likely, overexpression saturates the normal localization mechanisms (forward transport or perhaps net available space in the ERGIC).
A platform for IgM polymerization
The extraordinary efficiency and fidelity of antibody-secreting cells requires adequate production, QC and transport systems. Accordingly, B-cell differentiation entails dramatic structural and biochemical modifications, with the coordinated and sequential appearance of groups of functionally related proteins (van Anken et al, 2003; Romijn et al, 2005). The overlapping temporal and spatial distribution in differentiating B cells (Figure 7), their interactions (Figures 1, 2, 3 and 4) and their preferential binding to certain IgM subunits (Figure 6) suggest that ERp44 and ERGIC-53 concur in IgM polymerization. This hypothesis is confirmed by their ability to reconstitute polymerization when overexpressed in HeLa cells (Figure 5). Active ERGIC-53 promotes both polymerization and secretion, independently from its subcellular localization (wt or KKAA). Hexameric ERGIC-53 may provide a planar platform that concentrates μ2L2 subunits and favors their ordered assembly (Figure 8), avoiding formation of larger polymers (de Lalla et al, 1998). In support of this model, the inactive N156A mutant inhibits polymerization, likely because hetero-hexamers (with endogenous wt molecules) with reduced valency are formed. Moreover, MCFD2 synergizes with ERGIC-53 in promoting IgM polymerization (Figure 5B). Hence, although dispensable for Cathepsin Z and C binding (Nyfeler et al, 2006), MCFD2 seems to favor the interaction of ERGIC-53 with μ, as described for factor VIII (Zhang et al, 2005).
The role of ERp44
ERp44 could enhance IgM polymerization in several ways (Figure 8). First, the RDEL-dependent retention increases subunit concentration in an environment suitable for polymerization. Second, the ERp44Cys29–μCys575 mixed disulfides may provide oxidative equivalents necessary for polymer formation. Third, ERp44 could recruit Ero1α and β to the platform (Anelli et al, 2002; Otsu et al, 2006), thus providing additional oxidative power. Finally, the presence of some ERp44 downstream of the ERGIC provides a second checkpoint ensuring that only native polymers are secreted.
Sequential QC checkpoints in IgM polymerization
By concentrating distally with respect to PDI, ERp44 and ERGIC-53 receive IgM subunits that have completed the first step in the production line, that is the BiP-dependent μ2L2 assembly (Hendershot and Kearney, 1988; Sitia et al, 1990; Hendershot and Sitia, 2005). Indeed, more μ can reach ERp44 when also L chain is present, and μ2L2 and higher order assemblies preferentially associate with both ERGIC-53 and ERp44 in HeLa cells (Figure 6B and Supplementary Figure S6). The delayed interactions of nascent μ chain with ERp44 and ERGIC-53 with respect to BiP in B-lymphoma cells (Figure 7E and F) support the existence of sequential steps in IgM polymerization (Figure 8).
Several lines of evidence indicate that the ER can sustain IgM polymerization: (i) the presence of mannose 7–8 glycans in the conserved μs tailpiece indicates that polymerization makes these sugar moieties inaccessible to the Golgi enzymes (Davis et al, 1989a; Cals et al, 1996); (ii) myeloma cells lacking L chains form covalent polymers in which μ chains are bound to BiP (Bornemann et al, 1995); (iii) polymerization is still detectable when ER–Golgi transport is inhibited (Brewer et al, 1994); (iv) the ER-localized ERGIC-53 KKAA mutant also stimulates polymerization (Figure 5); and (v) expression of mutant μ chains (μΔCH1) in L chain producing cells causes the formation of detergent-insoluble polymers in dilated ER cisternae surrounded by ribosomes (Valetti et al, 1991). In the absence of L chains, however, μΔCH1 condensation, which requires Cys575-dependent polymerization, occurred in the ERGIC (Mattioli et al, 2006). All these data suggest that polymerization can occur in the ER. However, the subcellular localization and coordinated increase of ERGIC-53 and ERp44 during B-cell differentiation suggest that the spatial subdivision within the early secretory compartment is important to promote IgM biogenesis. By concentrating and orienting subunits, ERGIC-53 and possibly other molecules in B cells, could couple polymerization and forward transport, ERp44 bringing unpolymerized subunits back for another chance of polymerization or for degradation. In line with the two-step IgM QC (Figure 8), brefeldin-A inhibits the degradation of μ only when these are assembled with L chains (Elkabetz et al, 2003).
Changes in pH or Ca2+ concentration could mediate the detachment of completed polymers from ERGIC-53, as described for other substrates (Appenzeller-Herzog et al, 2004). However, the stimulatory effects of the ER-localized KKAA mutant suggest that the conformational changes that accompany polymerization could mediate the release, perhaps hiding the μ-chain ERGIC-53-binding sites. This important issue needs further investigation.
In view of their evolutionary conservation, ERp44 and ERGIC-53 could play a wider role in facilitating protein assembly and secretion, similar to the one we describe here for IgM.
Materials and methods
Pulse and chase, IP and Western blotting
Cells were incubated for 30 min in DMEM without methionine and cysteine, 1% dialysed FCS, pulsed with 35S-labeled amino acids (200 μCi/9 × 106 cells) and then washed and chased in complete medium for the indicated times. SN were harvested, cells treated with 10 mM NEM and lysed as described (Anelli et al, 2002). The IP material from cell lysates and SN was resolved on SDS–PAGE, and gels dried or transferred to nitrocellulose and visualized by autoradiography. Details of co-immunoprecipitation assays are described in Supplementary data. Western blot analyses were performed as described previously (Anelli et al, 2002). WB images were acquired with the Chemidoc-it Imaging System (UVP, Upland, CA) and processed with Adobe Photoshop 7.0 (Adobe Systems Inc.). In each panel, white lines indicate that lanes coming from a single gel were juxtaposed. Black lines separate lanes coming from different gels run under identical conditions.
Chemical crosslinking
Cells were washed and incubated for 30 min at 4°C with 1 mM DSP on a rocking platform. The reaction was quenched by rinsing the cells once with 20 mM Tris–HCl pH 7.4, followed by two incubations for 15 min at RT with the same buffer. Cells were then lysed in RIPA+10 mM NEM.
Immunofluorescence
Samples of stained HeLa or lymphoid cells (see Supplementary data for details) were analyzed on an Olympus inverted fluorescence microscope (model IX70) with DeltaVision RT Deconvolution System (Alembic, HSR, Milano). After deconvolution, images were processed with Adobe Photoshop 7.0 (Adobe Systems Inc.).
Transient transfection, RNAi and quantitative real-time PCR
Transient transfections were performed as described previously (Anelli et al, 2002). Lipofectamine and Plus reagent were used for 3T3 cells, as recommended by the supplier.
RNAi experiments were performed using Lipofectamine RNAiMAX reagent as recommended by the supplier. siRNA oligos were purchased from MWG-Biotech AG (Ebersberg, Germany); sequences are reported in Supplementary data.
Real-time PCR was performed using the Power SYBR® green PCR master mix (Applied Biosystems) in the Applied Biosytems 7900HT Real-Time PCR system following the manufacturer's instructions. Relative quantifications were carried out by the ΔΔCt method, using histone 3 (H3) as reference gene. Primer sequences are reported in Supplementary data.
Supplementary Material
Acknowledgments
We thank Christian Appenzeller, Ineke Braakman, Claudia Fazi, Hans-Peter Hauri, Ylva Lindqvist, Alexandre Mezghrani, Etienne Neve, Mieko Otsu, Ralph Petterson, Flora Peyvandi, Jakko Saraste, Cristina Scielzo, Marta Spreafico for providing helpful suggestions, discussions and essential reagents, Claudio Fagioli and Elena Pasqualetto for technical help, Ana Fella and Raffaella Brambati for secretarial assistance. We apologize with the many colleagues whose seminal papers could not be cited for space limitations. The financial support of Telethon—Italy (Grant no. GGP06155), Associazione Italiana per la Ricerca sul Cancro, and Cariplo (Project NOBEL) is gratefully acknowledged.
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