Skip to main content
PMC home page
Journal of Biomolecular Techniques : JBT logoLink to Journal of Biomolecular Techniques : JBT
. 2002 Dec;13(4):205–218.

Glyco-catch method: A lectin affinity technique for glycoproteomics

J Hirabayashi, T Hashidate, K Kasai
PMCID: PMC2279871  PMID: 19498986

Full Text

The Full Text of this article is available as a PDF (353.3 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Altschul S. F., Gish W., Miller W., Myers E. W., Lipman D. J. Basic local alignment search tool. J Mol Biol. 1990 Oct 5;215(3):403–410. doi: 10.1016/S0022-2836(05)80360-2. [DOI] [PubMed] [Google Scholar]
  2. Arata Y., Hirabayashi J., Kasai K. Sugar binding properties of the two lectin domains of the tandem repeat-type galectin LEC-1 (N32) of Caenorhabditis elegans. Detailed analysis by an improved frontal affinity chromatography method. J Biol Chem. 2000 Oct 31;276(5):3068–3077. doi: 10.1074/jbc.M008602200. [DOI] [PubMed] [Google Scholar]
  3. Beauchemin N., Turbide C., Afar D., Bell J., Raymond M., Stanners C. P., Fuks A. A mouse analogue of the human carcinoembryonic antigen. Cancer Res. 1989 Apr 15;49(8):2017–2021. [PubMed] [Google Scholar]
  4. Cha Y., Holland S. M., August J. T. The cDNA sequence of mouse LAMP-2. Evidence for two classes of lysosomal membrane glycoproteins. J Biol Chem. 1990 Mar 25;265(9):5008–5013. [PubMed] [Google Scholar]
  5. Chen J. W., Cha Y., Yuksel K. U., Gracy R. W., August J. T. Isolation and sequencing of a cDNA clone encoding lysosomal membrane glycoprotein mouse LAMP-1. Sequence similarity to proteins bearing onco-differentiation antigens. J Biol Chem. 1988 Jun 25;263(18):8754–8758. [PubMed] [Google Scholar]
  6. Dveksler G. S., Pensiero M. N., Cardellichio C. B., Williams R. K., Jiang G. S., Holmes K. V., Dieffenbach C. W. Cloning of the mouse hepatitis virus (MHV) receptor: expression in human and hamster cell lines confers susceptibility to MHV. J Virol. 1991 Dec;65(12):6881–6891. doi: 10.1128/jvi.65.12.6881-6891.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Esko J. D. Animal cell mutants defective in heparan sulfate polymerization. Adv Exp Med Biol. 1992;313:97–106. doi: 10.1007/978-1-4899-2444-5_10. [DOI] [PubMed] [Google Scholar]
  8. Granger B. L., Green S. A., Gabel C. A., Howe C. L., Mellman I., Helenius A. Characterization and cloning of lgp110, a lysosomal membrane glycoprotein from mouse and rat cells. J Biol Chem. 1990 Jul 15;265(20):12036–12043. [PubMed] [Google Scholar]
  9. Hagenbuch B., Adler I. D., Schmid T. E. Molecular cloning and functional characterization of the mouse organic-anion-transporting polypeptide 1 (Oatp1) and mapping of the gene to chromosome X. Biochem J. 2000 Jan 1;345(Pt 1):115–120. [PMC free article] [PubMed] [Google Scholar]
  10. Hirabayashi J., Arata Y., Kasai K. Glycome project: concept, strategy and preliminary application to Caenorhabditis elegans. Proteomics. 2001 Feb;1(2):295–303. doi: 10.1002/1615-9861(200102)1:2<295::AID-PROT295>3.0.CO;2-C. [DOI] [PubMed] [Google Scholar]
  11. Hirabayashi J., Arata Y., Kasai K. Reinforcement of frontal affinity chromatography for effective analysis of lectin-oligosaccharide interactions. J Chromatogr A. 2000 Aug 25;890(2):261–271. doi: 10.1016/s0021-9673(00)00545-8. [DOI] [PubMed] [Google Scholar]
  12. Hirabayashi J., Ayaki H., Soma G., Kasai K. Production and purification of a recombinant human 14 kDa beta-galactoside-binding lectin. FEBS Lett. 1989 Jul 3;250(2):161–165. doi: 10.1016/0014-5793(89)80711-2. [DOI] [PubMed] [Google Scholar]
  13. Hirabayashi J., Kasai K. Effect of amino acid substitution by sited-directed mutagenesis on the carbohydrate recognition and stability of human 14-kDa beta-galactoside-binding lectin. J Biol Chem. 1991 Dec 15;266(35):23648–23653. [PubMed] [Google Scholar]
  14. Hirabayashi Jun, Hashidate Tomomi, Arata Yoichiro, Nishi Nozomu, Nakamura Takanori, Hirashima Mitsuomi, Urashima Tadasu, Oka Toshihiko, Futai Masamitsu, Muller Werner E. G. Oligosaccharide specificity of galectins: a search by frontal affinity chromatography. Biochim Biophys Acta. 2002 Sep 19;1572(2-3):232–254. doi: 10.1016/s0304-4165(02)00311-2. [DOI] [PubMed] [Google Scholar]
  15. Hirabayashi Jun, Hayama Ko, Kaji Hiroyuki, Isobe Toshiaki, Kasai Ken-ichi. Affinity capturing and gene assignment of soluble glycoproteins produced by the nematode Caenorhabditis elegans. J Biochem. 2002 Jul;132(1):103–114. doi: 10.1093/oxfordjournals.jbchem.a003186. [DOI] [PubMed] [Google Scholar]
  16. Hirabayashi Jun, Kasai Ken-ichi. Separation technologies for glycomics. J Chromatogr B Analyt Technol Biomed Life Sci. 2002 May 5;771(1-2):67–87. doi: 10.1016/s1570-0232(02)00057-0. [DOI] [PubMed] [Google Scholar]
  17. Inglis J. D., Lee M., Davidson D. R., Hill R. E. Isolation of two cDNAs encoding novel alpha 1-antichymotrypsin-like proteins in a murine chondrocytic cell line. Gene. 1991 Oct 15;106(2):213–220. doi: 10.1016/0378-1119(91)90201-l. [DOI] [PubMed] [Google Scholar]
  18. Kawai J., Shinagawa A., Shibata K., Yoshino M., Itoh M., Ishii Y., Arakawa T., Hara A., Fukunishi Y., Konno H. Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685–690. doi: 10.1038/35055500. [DOI] [PubMed] [Google Scholar]
  19. Laine R. A. A calculation of all possible oligosaccharide isomers both branched and linear yields 1.05 x 10(12) structures for a reducing hexasaccharide: the Isomer Barrier to development of single-method saccharide sequencing or synthesis systems. Glycobiology. 1994 Dec;4(6):759–767. doi: 10.1093/glycob/4.6.759. [DOI] [PubMed] [Google Scholar]
  20. Lee S. C., Chang C. J., Lee Y. M., Lei H. Y., Lai M. Y., Chen D. S. Molecular cloning of cDNAs corresponding to two genes of alpha 1-acid glycoprotein and characterization of two alleles of AGP-1 in the mouse. DNA. 1989 May;8(4):245–251. doi: 10.1089/dna.1.1989.8.245. [DOI] [PubMed] [Google Scholar]
  21. Marguet D., Bernard A. M., Vivier I., Darmoul D., Naquet P., Pierres M. cDNA cloning for mouse thymocyte-activating molecule. A multifunctional ecto-dipeptidyl peptidase IV (CD26) included in a subgroup of serine proteases. J Biol Chem. 1992 Feb 5;267(4):2200–2208. [PubMed] [Google Scholar]
  22. McCuaig K., Rosenberg M., Nédellec P., Turbide C., Beauchemin N. Expression of the Bgp gene and characterization of mouse colon biliary glycoprotein isoforms. Gene. 1993 May 30;127(2):173–183. doi: 10.1016/0378-1119(93)90716-G. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Natsuka S., Hase S. Analysis of N- and O-glycans by pyridylamination. Methods Mol Biol. 1998;76:101–113. doi: 10.1385/0-89603-355-4:101. [DOI] [PubMed] [Google Scholar]
  24. Nikkilä H., Gitlin J. D., Muller-Eberhard U. Rat hemopexin. Molecular cloning, primary structural characterization, and analysis of gene expression. Biochemistry. 1991 Jan 22;30(3):823–829. doi: 10.1021/bi00217a036. [DOI] [PubMed] [Google Scholar]
  25. Nonaka M., Matsuda Y., Shiroishi T., Moriwaki K., Nonaka M., Natsuume-Sakai S. Molecular cloning of mouse beta 2-glycoprotein I and mapping of the gene to chromosome 11. Genomics. 1992 Aug;13(4):1082–1087. doi: 10.1016/0888-7543(92)90022-k. [DOI] [PubMed] [Google Scholar]
  26. Ogura K., Choudhuri S., Klaassen C. D. Genomic organization and tissue-specific expression of splice variants of mouse organic anion transporting polypeptide 2. Biochem Biophys Res Commun. 2001 Feb 23;281(2):431–439. doi: 10.1006/bbrc.2001.4387. [DOI] [PubMed] [Google Scholar]
  27. Overbergh L., Torrekens S., Van Leuven F., Van den Berghe H. Molecular characterization of the murinoglobulins. J Biol Chem. 1991 Sep 5;266(25):16903–16910. [PubMed] [Google Scholar]
  28. Ovnic M., Tepperman K., Medda S., Elliott R. W., Stephenson D. A., Grant S. G., Ganschow R. E. Characterization of a murine cDNA encoding a member of the carboxylesterase multigene family. Genomics. 1991 Feb;9(2):344–354. doi: 10.1016/0888-7543(91)90263-e. [DOI] [PubMed] [Google Scholar]
  29. Sakiyama F., Masaki T. Lysyl endopeptidase of Achromobacter lyticus. Methods Enzymol. 1994;244:126–137. doi: 10.1016/0076-6879(94)44011-5. [DOI] [PubMed] [Google Scholar]
  30. Stanley P., Ioffe E. Glycosyltransferase mutants: key to new insights in glycobiology. FASEB J. 1995 Nov;9(14):1436–1444. doi: 10.1096/fasebj.9.14.7589985. [DOI] [PubMed] [Google Scholar]
  31. Suzuki Y., Yamamoto K., Sinohara H. Molecular cloning and sequence analysis of full-length cDNA coding for mouse contrapsin. J Biochem. 1990 Sep;108(3):344–346. doi: 10.1093/oxfordjournals.jbchem.a123204. [DOI] [PubMed] [Google Scholar]
  32. Tabuchi N., Akasaki K., Sasaki T., Kanda N., Tsuji H. Identification and characterization of a major lysosomal membrane glycoprotein, LGP85/LIMP II in mouse liver. J Biochem. 1997 Oct;122(4):756–763. doi: 10.1093/oxfordjournals.jbchem.a021820. [DOI] [PubMed] [Google Scholar]
  33. Takahashi N., Wada Y., Awaya J., Kurono M., Tomiya N. Two-dimensional elution map of GalNAc-containing N-linked oligosaccharides. Anal Biochem. 1993 Jan;208(1):96–109. doi: 10.1006/abio.1993.1013. [DOI] [PubMed] [Google Scholar]
  34. Takano M., Kondo J., Yayama K., Otani M., Sano K., Okamoto H. Molecular cloning of cDNAs for mouse low-molecular-weight and high-molecular-weight prekininogens. Biochim Biophys Acta. 1997 May 30;1352(2):222–230. doi: 10.1016/s0167-4781(97)00018-3. [DOI] [PubMed] [Google Scholar]
  35. Telo' P., Breviario F., Huber P., Panzeri C., Dejana E. Identification of a novel cadherin (vascular endothelial cadherin-2) located at intercellular junctions in endothelial cells. J Biol Chem. 1998 Jul 10;273(28):17565–17572. doi: 10.1074/jbc.273.28.17565. [DOI] [PubMed] [Google Scholar]
  36. Yang F., Linehan L. A., Friedrichs W. E., Lalley P. A., Sakaguchi A. Y., Bowman B. H. Characterization of the mouse haptoglobin gene. Genomics. 1993 Nov;18(2):374–380. doi: 10.1006/geno.1993.1478. [DOI] [PubMed] [Google Scholar]
  37. Ying S., Shiraishi A., Kao C. W., Converse R. L., Funderburgh J. L., Swiergiel J., Roth M. R., Conrad G. W., Kao W. W. Characterization and expression of the mouse lumican gene. J Biol Chem. 1997 Nov 28;272(48):30306–30313. doi: 10.1074/jbc.272.48.30306. [DOI] [PubMed] [Google Scholar]
  38. van Leuven F., Torrekens S., Overbergh L., Lorent K., de Strooper B., van den Berghe H. The primary sequence and the subunit structure of mouse alpha-2-macroglobulin, deduced from protein sequencing of the isolated subunits and from molecular cloning of the cDNA. Eur J Biochem. 1992 Nov 15;210(1):319–327. doi: 10.1111/j.1432-1033.1992.tb17424.x. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Biomolecular Techniques : JBT are provided here courtesy of The Association of Biomolecular Resource Facilities

RESOURCES