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Journal of Clinical Microbiology logoLink to Journal of Clinical Microbiology
. 1995 Jun;33(6):1501–1509. doi: 10.1128/jcm.33.6.1501-1509.1995

Colonizing populations of Candida albicans are clonal in origin but undergo microevolution through C1 fragment reorganization as demonstrated by DNA fingerprinting and C1 sequencing.

S R Lockhart 1, J J Fritch 1, A S Meier 1, K Schröppel 1, T Srikantha 1, R Galask 1, D R Soll 1
PMCID: PMC228204  PMID: 7650175

Abstract

The genetic homogeneity of nine commensal and infecting populations of Candida albicans has been assessed by fingerprinting multiple isolates from each population by Southern blot hybridization first with the Ca3 probe and then with the 0.98-kb C1 fragment of the Ca3 probe. The isolates from each population were highly related, demonstrating the clonal origin of each population, but each population contained minor variants, demonstrating microevolution. Variation in each case was limited to bands of the Ca3 fingerprint pattern which hybridized with the 0.98-kb C1 fragment. The C1 fragment was therefore sequenced and demonstrated to contain an RPS repetitive element. The C1 fragment also contained part or all of a true end of the RPS element. These results, therefore, demonstrate that most colonizing C. albicans populations in nonimmuno-suppressed patients are clonal, that microevolution can be detected in every colonizing population by C1 hybridization, and that C1 contains the repeat RPS element.

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Selected References

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  1. Anderson J., Srikantha T., Morrow B., Miyasaki S. H., White T. C., Agabian N., Schmid J., Soll D. R. Characterization and partial nucleotide sequence of the DNA fingerprinting probe Ca3 of Candida albicans. J Clin Microbiol. 1993 Jun;31(6):1472–1480. doi: 10.1128/jcm.31.6.1472-1480.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bedell G. W., Soll D. R. Effects of low concentrations of zinc on the growth and dimorphism of Candida albicans: evidence for zinc-resistant and -sensitive pathways for mycelium formation. Infect Immun. 1979 Oct;26(1):348–354. doi: 10.1128/iai.26.1.348-354.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Chibana H., Iwaguchi S., Homma M., Chindamporn A., Nakagawa Y., Tanaka K. Diversity of tandemly repetitive sequences due to short periodic repetitions in the chromosomes of Candida albicans. J Bacteriol. 1994 Jul;176(13):3851–3858. doi: 10.1128/jb.176.13.3851-3858.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Doi M., Mizuguchi I., Homma M., Tanaka K. Electrophoretic karyotypes of Candida yeasts recurrently isolated from single patients. Microbiol Immunol. 1994;38(1):19–23. doi: 10.1111/j.1348-0421.1994.tb01739.x. [DOI] [PubMed] [Google Scholar]
  5. Hellstein J., Vawter-Hugart H., Fotos P., Schmid J., Soll D. R. Genetic similarity and phenotypic diversity of commensal and pathogenic strains of Candida albicans isolated from the oral cavity. J Clin Microbiol. 1993 Dec;31(12):3190–3199. doi: 10.1128/jcm.31.12.3190-3199.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Iwaguchi S., Homma M., Chibana H., Tanaka K. Isolation and characterization of a repeated sequence (RPS1) of Candida albicans. J Gen Microbiol. 1992 Sep;138(9):1893–1900. doi: 10.1099/00221287-138-9-1893. [DOI] [PubMed] [Google Scholar]
  7. Lee K. L., Buckley H. R., Campbell C. C. An amino acid liquid synthetic medium for the development of mycelial and yeast forms of Candida Albicans. Sabouraudia. 1975 Jul;13(2):148–153. doi: 10.1080/00362177585190271. [DOI] [PubMed] [Google Scholar]
  8. McCullough M. J., Ross B. C., Dwyer B. D., Reade P. C. Genotype and phenotype of oral Candida albicans from patients infected with the human immunodeficiency virus. Microbiology. 1994 May;140(Pt 5):1195–1202. doi: 10.1099/13500872-140-5-1195. [DOI] [PubMed] [Google Scholar]
  9. Merz W. G., Connelly C., Hieter P. Variation of electrophoretic karyotypes among clinical isolates of Candida albicans. J Clin Microbiol. 1988 May;26(5):842–845. doi: 10.1128/jcm.26.5.842-845.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Redston M. S., Kern S. E. Klenow co-sequencing: a method for eliminating "stops". Biotechniques. 1994 Aug;17(2):286–288. [PubMed] [Google Scholar]
  11. Sadhu C., McEachern M. J., Rustchenko-Bulgac E. P., Schmid J., Soll D. R., Hicks J. B. Telomeric and dispersed repeat sequences in Candida yeasts and their use in strain identification. J Bacteriol. 1991 Jan;173(2):842–850. doi: 10.1128/jb.173.2.842-850.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Scherer S., Stevens D. A. Application of DNA typing methods to epidemiology and taxonomy of Candida species. J Clin Microbiol. 1987 Apr;25(4):675–679. doi: 10.1128/jcm.25.4.675-679.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Schmid J., Rotman M., Reed B., Pierson C. L., Soll D. R. Genetic similarity of Candida albicans strains from vaginitis patients and their partners. J Clin Microbiol. 1993 Jan;31(1):39–46. doi: 10.1128/jcm.31.1.39-46.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Schmid J., Voss E., Soll D. R. Computer-assisted methods for assessing strain relatedness in Candida albicans by fingerprinting with the moderately repetitive sequence Ca3. J Clin Microbiol. 1990 Jun;28(6):1236–1243. doi: 10.1128/jcm.28.6.1236-1243.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Schröppel K., Rotman M., Galask R., Mac K., Soll D. R. Evolution and replacement of Candida albicans strains during recurrent vaginitis demonstrated by DNA fingerprinting. J Clin Microbiol. 1994 Nov;32(11):2646–2654. doi: 10.1128/jcm.32.11.2646-2654.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Soll D. R., Galask R., Isley S., Rao T. V., Stone D., Hicks J., Schmid J., Mac K., Hanna C. Switching of Candida albicans during successive episodes of recurrent vaginitis. J Clin Microbiol. 1989 Apr;27(4):681–690. doi: 10.1128/jcm.27.4.681-690.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Soll D. R., Galask R., Schmid J., Hanna C., Mac K., Morrow B. Genetic dissimilarity of commensal strains of Candida spp. carried in different anatomical locations of the same healthy women. J Clin Microbiol. 1991 Aug;29(8):1702–1710. doi: 10.1128/jcm.29.8.1702-1710.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Soll D. R. High-frequency switching in Candida albicans. Clin Microbiol Rev. 1992 Apr;5(2):183–203. doi: 10.1128/cmr.5.2.183. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Soll D. R., Langtimm C. J., McDowell J., Hicks J., Galask R. High-frequency switching in Candida strains isolated from vaginitis patients. J Clin Microbiol. 1987 Sep;25(9):1611–1622. doi: 10.1128/jcm.25.9.1611-1622.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Soll D. R., Staebell M., Langtimm C., Pfaller M., Hicks J., Rao T. V. Multiple Candida strains in the course of a single systemic infection. J Clin Microbiol. 1988 Aug;26(8):1448–1459. doi: 10.1128/jcm.26.8.1448-1459.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Sullivan D., Bennett D., Henman M., Harwood P., Flint S., Mulcahy F., Shanley D., Coleman D. Oligonucleotide fingerprinting of isolates of Candida species other than C. albicans and of atypical Candida species from human immunodeficiency virus-positive and AIDS patients. J Clin Microbiol. 1993 Aug;31(8):2124–2133. doi: 10.1128/jcm.31.8.2124-2133.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]

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