Abstract
Yeast phosphatidylinositol transfer protein (Sec14p) function is essential for production of Golgi-derived secretory vesicles, and this requirement is bypassed by mutations in at least seven genes. Analyses of such ‘bypass Sec14p’ mutants suggest that Sec14p acts to maintain an essential Golgi membrane diacylglycerol (DAG) pool that somehow acts to promote Golgi secretory function. SPO14 encodes the sole yeast phosphatidylinositol-4,5-bisphosphate-activated phospholipase D (PLD). PLD function, while essential for meiosis, is dispensable for vegetative growth. Herein, we report specific physiological circumstances under which an unanticipated requirement for PLD activity in yeast vegetative Golgi secretory function is revealed. This PLD involvement is essential in ‘bypass Sec14p’ mutants where normally Sec14p-dependent Golgi secretory reactions are occurring in a Sec14p-independent manner. PLD catalytic activity is necessary but not sufficient for ‘bypass Sec14p’, and yeast operating under ‘bypass Sec14p’ conditions are ethanol-sensitive. These data suggest that PLD supports ‘bypass Sec14p’ by generating a phosphatidic acid pool that is somehow utilized in supporting yeast Golgi secretory function.
The Saccharomyces cerevisiae SEC14 gene product (Sec14p) plays an essential role in protein exit from the yeast Golgi complex and represents the major phosphatidylinositol (PtdIns) transfer protein (PITP) of yeast (1, 2). The case for how Sec14p stimulates Golgi secretory function is derived primarily from analyses of mutations that permit efficient Golgi secretory activity (and cell viability) in the face of sec14 deletion mutations (1–10). Characterization of these ‘bypass Sec14p’ mutations suggests that Sec14p maintains the integrity of a critical Golgi diacylglycerol (DAG) pool that is somehow required for Golgi secretory function (4, 7). This concept stems from two general findings (see Fig. 1). First, ‘bypass Sec14p’ is generated by genetic inactivation of the cytidine 5′-diphosphate (CDP)-choline pathway for phosphatidylcholine (PtdCho) biosynthesis; a pathway that consumes DAG (3). Biochemical insight into this genetic relationship was provided by the demonstration that Sec14p is an inhibitor of the CDP-choline pathway (4, 5). Second, accelerated PtdIns-metabolism represents another in vivo mechanism for effecting a ‘bypass Sec14p’ phenotype (7, 9). Consistent with those findings, the PtdIns-transfer activity of mammalian PITP is necessary for rescue of Sec14p defects (11), and both Sec14p and mammalian PITPs stimulate PtdIns metabolism in phosphoinositide-dependent reactions that have been reconstituted in permeabilized mammalian cells (12–15). Thus, Sec14p may also potentiate PtdIns metabolism in an action that would resupply the Golgi DAG pool (7).
Recently, it has been suggested that PtdIns-4,5-P2-stimulated phospholipase D (PLD) plays an essential role in promoting Golgi-derived vesicle budding, and that PITPs may function in such a regulatory loop by providing PtdIns to lipid kinases so as to fuel phosphoinositide synthesis (16). Localized enrichment of phosphoinositides might facilitate the proper spatial recruitment of vesicle coat proteins, thereby facilitating vesicle budding (17). A primary foundation for this hypothesis is the demonstration that the GTP-bound form of ADP-ribosylation factor synergizes with PtdIns-4,5-bisphosphate (PtdIns-4,5-P2) in stimulation of mammalian PLD activity (18, 19). Although this hypothesis is attractive, direct evidence for a physiological role for PLD in mammalian secretory pathway function remains lacking. Indeed, the sole PtdIns-4,5-P2-activated PLD in yeast, while essential for sporulation, is dispensable for vegetative growth (20). Sec14p is essential for the viability of vegetative cells (1, 2).
We now identify specific physiological circumstances under which PLD activity is essential for yeast Golgi secretory function. This obligate PLD requirement is recorded in ‘bypass Sec14p’ mutants where normally Sec14p-dependent Golgi secretory reactions are occurring in a Sec14p-independent manner. The data indicate that generation of PtdOH likely defines the critical contribution of PLD to the ‘bypass Sec14p’ condition. The present body of evidence can be reconciled by one of two models: first, that PLD-generated PtdOH contributes to the critical Golgi membrane DAG pool by serving as substrate for PtdOH phosphohydrolases or, second, that DAG serves as precursor to a critical PtdOH pool.
MATERIALS AND METHODS
Media and Genetic Techniques.
All yeast media have been described (21). Standard methods were employed for yeast transformation and gene disruption experiments (22, 23).
Yeast Strains.
The strains employed included: CTY182 (MATa ura3–52, lys2–801, Δhis3–200), CTY1–1A (CTY182 sec14–1ts), CTY100 (CTY1–1A sac1–26), CTY102 (CTY1–1A pct1–2), CTY124 (CTY1–1A BSD1–124), CTY159 (MATa ura3–52, lys2–801, Δhis3–200, sec14–1ts, kes1–1), CTY160 (MATa ura3–52, Δhis3–200, sec14–1ts, cki1–1), and CTY213 (MATa ura3–52, Δhis3–200, sec14–1ts, BSD2–1). Isogenic spo14Δ derivatives included: CTY1092 (CTY182 spo14Δ∷URA3), CTY1079 (CTY1–1A spo14Δ∷HIS3), CTY1127 (CTY100 spo14Δ∷HIS3), CTY1096 (CTY102 spo14Δ∷URA3), CTY1129 (CTY124 spo14Δ∷HIS3), CTY1098 (CTY159 spo14Δ∷URA3), CTY1099 (CTY160 spo14Δ∷URA3), and CTY1093 (CTY213 spo14Δ∷URA3). Strain CTY1122 (MATa ura3–52, lys2–801, Δhis3–200, ade2–101, leu2–3,-112, sec14–1ts, pct1–2, spo14Δ∷URA3) was employed in the complementation experiments involving mutant spo14 genes encoding the PLDΔN and catalytically inactive PLD polypeptides.
Invertase Secretion Index.
Invertase secretion indices were determined as described (24). In alcohol challenge experiments, ethanol (1.5% final concentration) was added to cells at the time of shift to 37°C and yeast extract/peptone (YP) (0.1% glucose) medium, and this ethanol concentration was maintained throughout the 2-hr postshift incubation.
Lipid Analyses.
Methods for radiolabeling yeast cells with [32P]orthophosphate and [14C]acetate in inositol and choline-containing medium, and accompanying methods for lipid analysis and quantitation, have been described (4, 7).
RESULTS
Rationale for Identifying Yeast Mutants Defective in PtdCho Turnover.
The Sec14p requirement for Golgi secretory function is relieved by genetic inactivation of the CDP-choline pathway for PtdCho biosynthesis (Fig. 1; ref. 3). This effect is observed regardless of whether the CDP-choline pathway contributes to net PtdCho synthesis (e.g., when yeast are grown in choline-replete medium), or whether it functions solely in choline salvage when yeast are cultured in choline-free media (yeast cannot synthesize choline de novo) (3). Mutants exhibiting ‘bypass Sec14p’ phenotypes only in choline-free media should exhibit defects in cellular functions devoted to PtdCho turnover and liberation of choline. A candidate for such a function was PLD, the SPO14 gene product, which hydrolyzes PtdCho to choline and PtdOH (20).
A spo14Δ∷HIS3 disruption allele was introduced into sec14–1ts strains, and these double mutants were assessed for choline-remedial ‘bypass Sec14p’ phenotypes. Surprisingly, spo14Δ∷HIS3 failed to suppress sec14–1ts mutations, regardless of the choline content of the growth medium. Instead, PLD deficiency exacerbated Sec14p growth and secretory defects when sec14–1ts strains were incubated at semipermissive temperatures. While sec14–1ts, SPO14 strains grew well at 33.5°C, this temperature was restrictive for growth of isogenic sec14–1ts, spo14Δ strains (not shown). Consistent with these results, plasmid-curing experiments further demonstrated that spo14Δ∷HIS3 also failed to suppress sec14 null mutations. These data suggested that PLD might not represent the sole mechanism by which free choline could be generated in vegetative cells and revealed a refinement to the genetic screen for yeast mutants defective in choline generation. This refinement was to repeat the screen with a sec14–1ts, spo14Δ∷HIS3 parental strain deficient in PLD activity.
Revertants of a sec14–1ts, spo14Δ∷HIS3 strain that grew at 37°C in choline-free media were selected. Such sec14–1ts pseudorevertants normally are recovered easily, and these invariably represent ‘bypass Sec14p’ mutations that suppress the lethality of sec14 null mutations (3, 8). Surprisingly, the sec14–1ts, spo14Δ∷HIS3 strain yielded very few revertants at 37°C, and this result was obtained when either complex or minimal growth media (+ or − choline) were employed (Fig. 2A). The spontaneous reversion frequency was at least 500-fold lower for the sec14–1ts, spo14Δ∷HIS3 strain (<1 × 10−8/cell per generation) relative to the isogenic SPO14, sec14–1ts strain (ca. 5 × 10−6/cell per generation). These data demonstrated that facile recovery of ‘bypass Sec14p’ mutants required a wild-type SPO14 gene.
A Functional SPO14 Gene Is Required for Manifestation of ‘Bypass Sec14p’ Phenotypes.
To determine whether PLD represents an essential component of the mechanism(s) by which known classes of ‘bypass Sec14p’ alleles exerted their suppressor phenotypes (see Fig. 1), we introduced spo14Δ alleles into sec14–1ts strains harboring individual ‘bypass Sec14p’ mutations. These PLD-deficient derivative strains then were analyzed for their abilities to grow and secrete under Sec14p-deficient conditions. As shown in Fig. 2B, ‘bypass Sec14p’ mutations overcame sec14–1ts-associated growth defects only in the context of a SPO14 genetic background. Introduction of spo14Δ alleles abolished the suppressor phenotype of each ‘bypass Sec14p’ mutation and reimposed the essential Sec14p requirement for cell viability to each yeast strain.
This PLD requirement for ‘bypass Sec14p’ was recapitulated in assays assessing secretory pathway function. Wild-type strains grown at 37°C exhibited a secretion index (0.87 ± 0.03) that indicated efficient trafficking of invertase through the secretory pathway to the cell surface (Fig. 3A). This efficiency was not compromised by introduction of a spo14Δ allele, indicating that PLD insufficiency exerted no ill effect on Golgi secretory function in yeast expressing wild-type Sec14p. By contrast, an isogenic sec14–1ts strain exhibited a secretion index of only 0.13 ± 0.02. This value was diagnostic of a major intracellular pool of invertase that was blocked in transit from the yeast Golgi complex (1, 3, 24, 25). Introduction of a spo14Δ allele again had no effect on the magnitude of the sec14–1ts secretory block. ‘Bypass Sec14p’ mutations permit Sec14p-independent Golgi secretory function, and this effect was reflected in the elevated secretion indices measured for the corresponding mutants. These values ranged from 0.90 ± 0.05 to 0.62 ± 0.06 and substantially exceeded those determined for the isogenic sec14–1ts strain at 37°C (Fig. 3A). Indeed, these secretion indices approached those measured for wild-type yeast strains. However, spo14Δ derivatives of the ‘bypass Sec14p’ strains exhibited significant reductions (ca. 2-fold) in secretion index relative to their PLD-sufficient partners, indicating reimposition of a sec14 secretory block. We noted that the secretion indices of the PLD-insufficient ‘bypass Sec14p’ strains reproducibly exceeded those of the sec14–1ts control (Fig. 3A). Such data suggest that genetic inactivation of PLD did not abolish the effects of individual ‘bypass Sec14p’ mutations, but that it reduced these effects to below the threshold levels of Golgi function required to sustain cell viability.
As another measure of Golgi secretory function, pulse-radiolabeling studies (10) were employed to monitor carboxypeptidase Y (CPY) delivery to the yeast vacuole in SPO14 and spo14Δ derivatives of ‘bypass Sec14p’ strains. Consistent with the invertase results, CPY trafficking through the Golgi complex to the vacuole proceeded at wild-type rates for SEC14, SPO14 and SEC14, spo14Δ strains. SPO14 derivatives of ‘bypass Sec14p’ strains also exhibited wild-type rates of CPY delivery to the vacuole when operating under Sec14p-proficient conditions. However, PLD dysfunction in ‘bypass Sec14p’ strains lacking functional Sec14p imposed kinetics for CPY trafficking from the Golgi complex to the yeast vacuole that were intermediate between those recorded at 37°C for sec14–1ts and wild-type strains (not shown).
Catalytic Activity Is Necessary But Not Sufficient For ‘Bypass Sec14p’.
We employed genetic methods to assess the relationship between PLD catalytic activity and ‘bypass Sec14p’. Participation of PLD in sporulation requires both catalytic activity and its redistribution from a diffuse localization to membranes (26). Deletion of the PLD N terminus yields an active enzyme (PLDΔN) that is nonfunctional in promoting meiosis because it fails to relocalize (26). We tested whether PLDΔN expression from either low- or high-copy plasmids fulfilled the PLD requirement for ‘bypass Sec14p’. As shown in Fig. 2B, neither configuration for PLDΔN expression restored Sec14p-independent growth to spo14Δ derivatives of ‘bypass Sec14p’ mutants. Thus, PLD catalytic activity was insufficient for support of ‘bypass Sec14p’.
Mutations that inactivate PLD catalytic activity without compromising relocalization have been described (26, 27). One such allele, spo14K→H, disturbs an HKD motif that has been proposed to participate directly in catalysis of choline scission from PtdCho (27, 28). To determine whether PLD catalytic activity was necessary for Sec14p-independent Golgi function in bypass Sec14 mutants, YCp(spo14K→H) and YEp(spo14K→H) plasmids were introduced into Δspo14∷HIS3 derivatives of ‘bypass Sec14p’ strains. Again, both configurations of spo14K→H failed to impart Sec14p-independent growth to spo14Δ derivatives of ‘bypass Sec14p’ mutants (Fig. 3B). Both PLDΔN and the catalytically inactive spo14K→H PLD are expressed as full-length polypeptides that exhibit reasonable stability in vivo (26). These data demonstrated that PLD catalytic activity was necessary, but not sufficient, for ‘bypass Sec14p’. PLD localization was also of functional importance.
Ethanol Challenge Imparts Growth and Secretory Defects to ‘Bypass Sec14p’ Mutants Operating Under Sec14p-Deficient Conditions.
PLD activity might support ‘bypass Sec14p’ because it reduces PtdCho levels in Golgi membranes (3). Alternatively, PLD might generate a lipid precursor that is limiting in the Golgi membranes of Sec14p-deficient cells (4, 7, 9). We wished to address which effect defined the relevant contribution of PLD to ‘bypass Sec14p’. PLD catalyzes PtdCho hydrolysis to choline and PtdOH via a transphosphatidylation reaction that employs water as nucleophile (27, 29). Primary alcohols (e.g., ethanol) compete with water in this reaction and result in production of both PtdOH and phosphatidylalcohol as reaction products (29). We tested whether challenge of PLD-proficient ‘bypass Sec14p’ strains with sublethal concentrations of ethanol elicited pharmacological reimposition of a Sec14p requirement for cell viability. As expected, introduction of ethanol (3% vol/vol) into glucose-containing complex media was not detrimental to the growth of wild-type yeast or ‘bypass Sec14p’ strains harboring functional Sec14p. However, such an ethanol challenge was strongly growth inhibitory to these same ‘bypass Sec14p’ strains operating under conditions of Sec14p deficiency (Fig. 4A).
We also measured the efficiency of invertase secretion, as a function of ethanol challenge, for pct1 strains (Fig. 4B). Ethanol diminished secretory pathway function in the pct1–2 ‘bypass Sec14p’ strain, but not in its isogenic SEC14 or otherwise wild-type sec14–1ts strains. Although yeast PLD is not as proficient as mammalian PLD in utilizing ethanol for transphosphatidylation (20), and phosphatidylethanol is metabolized by yeast (not shown), ethanol (1.5% vol/vol) elicited a 39% reduction in the secretory competence of the ‘bypass Sec14p’ strain at 37°C (Fig. 4B). This modest difference was significant (>99.9% confidence level by Student’s t test), and the ethanol-mediated reduction in the Sec14p-independent secretion efficiency of the pct1–2 strain was ca. 50% of that recorded with spo14Δ (see Fig. 3A). These results suggest that PtdOH production, and not hydrolysis of PtdCho per se, represents the critical PLD activity required for the ‘bypass Sec14p’ phenotype.
Bulk PtdOH Levels Are Sensitive to PLD Activity.
To assess whether PLD activity resulted in measurable increases in bulk PtdOH content, we radiolabeled SPO14 or spo14Δ derivatives of pct1–2, sec14–1ts and sac1–26, sec14–1ts yeast strains to steady-state with [32P]orthophosphate, washed the cells, and shifted the cells to label-free medium for a 2-hr chase at 33.5°C. This temperature is semipermissive for sec14–1ts. Phospholipids subsequently were extracted and analyzed. Bulk PtdOH levels were increased significantly in the SPO14 strains (2.2 ± 0.2% of total phospholipid and 1.8 ± 0.6% of total phospholipid for pct1 and sac1 strains; n = 3) relative to the spo14Δ derivatives (0.5 ± 0.1% and 0.4 ± 0.1% of total phospholipid pct1 and sac1 strains; n = 3). This experimental protocol was repeated for measurement of bulk DAG by [14C]acetate radiolabeling. Bulk membrane DAG levels were not increased significantly in SPO14 strains (12.2 ± 0.9% and 17.9 ± 0.7% of total chloroform-soluble counts for sac1 and pct1 strains; n = 3) relative to spo14Δ derivatives (12.2 ± 1.6% and 18.9 ± 0.7% of total chloroform-soluble counts for sac1 and pct1 strains, respectively; n = 3).
DISCUSSION
Because ADP-ribosylation factor stimulates mammalian PLD activity in vitro (18, 19), PtdOH has been speculated to be a critical stimulator of vesicle budding in a regulatory pathway that also employs PITP (16). Indeed, PtdOH contributes an important, but undefined function for efficient protein transport from the endoplasmic reticulum to the mammalian Golgi complex (30–32). Yet, yeast PLD is insensitive to activation by ADP-ribosylation factor (33) and is nonessential for secretory pathway function. Thus, yeast and mammalian PLDs might execute distinct physiological functions. A caveat remains, however. Yeast exhibit a PtdIns-4,5-P2-insensitive PLD activity of undetermined function that, while exhibiting biochemical properties quite distinct from those of the SPO14 gene product, might yet share some functional redundancy with it (34).
We demonstrate that PtdIns-4,5-P2-stimulated PLD activity intersects with secretory pathway function under special circumstances. Specifically, PLD is essential for the Sec14p-independent Golgi function of ‘bypass Sec14p’ mutants. These data are in accord with the observation that PLD is somehow required for cki1-mediated ‘bypass Sec14p’ (35). We also provide evidence that this requirement involves generation of PtdOH that is required for Sec14p-independent survival of ‘bypass Sec14p’ mutants. Since increased SPO14 gene dosage fails to suppress Sec14p deficiencies in otherwise wild-type yeast (not shown), PLD must somehow be activated under ‘bypass Sec14p’ conditions to generate PtdOH. Such enhancement could occur at the level of PLD expression, specific activity, or localization, or PtdCho might become more accessible to PLD under ‘bypass Sec14p’ conditions.
Because PLD is dispensable for vegetative growth and secretion in the presence of Sec14p, but is required for maintenance of ‘bypass Sec14p’, PLD activity recapitulates Sec14p function in a meaningful way. One interpretation of these PLD data is that PtdOH, not DAG, is the key lipid effector for Sec14p-dependent Golgi secretory function. The proposed DAG requirement thereby is explained by DAG serving as a precursor to PtdOH (7, 34). A prediction of this model is that DAG kinase activity represents an important supporting activity for ‘bypass Sec14p’. Yet, expression of E. coli DAG kinase in yeast specifically exacerbates sec14 phenotypes and abolishes ‘bypass Sec14p’ phenotypes (7). In addition, there is as yet no evidence to indicate that yeast can convert DAG to PtdOH. Inspection of the yeast genome fails to identify genes with eukaryotic DAG kinase signatures or with similarities to E. coli DAG kinase. Biochemical demonstration of yeast DAG kinase activity also remains elusive (not shown).
An alternative possibility is that PLD-generated PtdOH serves as a precursor for DAG production and that PLD activity defines one of several sources of metabolic input that help supply the essential Golgi membrane DAG pool under conditions of Sec14p insufficiency. By this model, yeast PtdOH-phosphohydrolases (PAPs) function downstream of PLD by converting PtdOH to DAG (Fig. 1). Two lipid pyrophosphatases have been described recently that exhibit Mg2+-independent PAP activity in vitro, and double-null strains exhibit increased bulk PtdOH levels (36). Yet, such double-null strains do not exhibit ‘bypass Sec14p’ phenotypes, nor are such strains compromised for ‘bypass Sec14p’ (not shown). Biochemical data indicate that yeast exhibit additional, and as yet uncharacterized, Mg2+-dependent and Mg2+-independent PAP activities (ref. 36; not shown). The acid test for a PAP involvement in ‘bypass Sec14p’ requires a molecular description of the entire yeast PAP repertoire so that appropriately deficient strains can be analyzed.
In summary, we find that PLD is required for ‘bypass Sec14p’ in yeast and that this condition correlates with increases in bulk membrane PtdOH. The issue of whether DAG, PtdOH, or both lipids are required for Sec14p-dependent Golgi functions remains an open question.
Acknowledgments
We are grateful to George Carman (Rutgers University) for helpful discussions, for sharing data before publication, and for plasmid reagents. This work was supported by National Institutes of Health Grant GM44530 to V.A.B. J.E. and P.C.S. were also supported by grants from the National Institutes of Health.
ABBREVIATIONS
- PtdCho
phosphatidylcholine
- PtdIns
phosphatidylinositol
- PtdOH
phosphatidic acid
- DAG
diacylglycerol
- PITP
PtdIns transfer protein
- Sec14p
yeast PITP
- PLD
phospholipase D
- PAP
PtdOH-phosphohydrolase
- YPD
yeast extract/peptone/dextrose
Footnotes
This paper was submitted directly (Track II) to the Proceedings Office.
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