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Journal of Clinical Microbiology logoLink to Journal of Clinical Microbiology
. 1996 Mar;34(3):530–533. doi: 10.1128/jcm.34.3.530-533.1996

Rapid colorimetric hybridization assay for detecting amplified Helicobacter pylori DNA in gastric biopsy specimens.

A P Lage 1, A Fauconnier 1, A Burette 1, Y Glupczynski 1, A Bollen 1, E Godfroid 1
PMCID: PMC228840  PMID: 8904408

Abstract

A very simple, practical, sensitive, and specific colorimetric hybridization assay for detecting amplified Helicobacter pylori DNA is described. This assay, which combines a sensitive sandwich DNA hybridization reaction and a colorimetric protocol similar to those used in conventional enzyme immunoassays, was shown to be suitable for detecting H. pylori-infected gastric biopsy specimens and for monitoring the eradication of the pathogen after treatment. The specificity and sensitivity of the colorimetric hybridization assay were tested by assaying 27 H. pylori strains (4 reference and 23 clinical isolates), 9 strains of other Helicobacter spp. or Campylobacter spp., and 11 clinical isolates of other urease-positive bacteria. The likelihood of H. pylori detection in gastric biopsy specimens by the colorimetric hybridization assay was evaluated with 23 H. pylori-positive and 41 H. pylori-negative biopsy specimens on the basis of positive and negative results, respectively, of culture, rapid urease test, histological examination, and PCR. Biopsy specimens from 33 treated patients, endoscopied 4 to 8 weeks after the end of treatment, were also tested. All H. pylori strains showed positive results in the colorimetric hybridization assay, presenting optical densities at 450 nm (OD450S) of > or = 3.0. None of the other Helicobacter spp., Campylobacter spp., or the clinical isolates of other urease-positive bacteria showed OD450S equal to or greater than the cutoff (mean OD450 cutoff, 0.208). The colorimetric hybridization assay detected all 23 H. pylori-positive biopsy specimens (mean OD450, 2.910 +/- 0.295), while none of the H. pylori-negative biopsy specimens was shown to be positive in the assay (mean OD450, 0.108 +/- 0.025). H. pylori was considered to be not eradicated from three of the posttreatment biopsy specimens by culture, rapid urease test, histological examination, and PCR. They were all positive by the colorimetric hybridization assay, and their OD450S were > or = 3.0. The colorimetric hybridization assay also detected two other H. pylori-positive patients. Specimens from these two patients had negative culture, rapid urease test, and histology results, and a specimen from one of them also tested negative by PCR. These results indicate that the colorimetric hybridization assay is a suitable method both for the diagnosis of H. pylori in biopsy specimens and for the follow-up of patients after the end of treatment.

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Selected References

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  1. Ayyanathan K., Datta S. A non-radioactive DNA diagnostic procedure for the detection of malarial infection: general application to genome with repetitive sequences. Mol Cell Probes. 1995 Apr;9(2):83–89. doi: 10.1016/s0890-8508(95)80032-8. [DOI] [PubMed] [Google Scholar]
  2. Bickley J., Owen R. J., Fraser A. G., Pounder R. E. Evaluation of the polymerase chain reaction for detecting the urease C gene of Helicobacter pylori in gastric biopsy samples and dental plaque. J Med Microbiol. 1993 Nov;39(5):338–344. doi: 10.1099/00222615-39-5-338. [DOI] [PubMed] [Google Scholar]
  3. Blaser M. J., Parsonnet J. Parasitism by the "slow" bacterium Helicobacter pylori leads to altered gastric homeostasis and neoplasia. J Clin Invest. 1994 Jul;94(1):4–8. doi: 10.1172/JCI117336. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Cellini L., Allocati N., Di Campli E., Dainelli B. Helicobacter pylori: a fickle germ. Microbiol Immunol. 1994;38(1):25–30. doi: 10.1111/j.1348-0421.1994.tb01740.x. [DOI] [PubMed] [Google Scholar]
  5. Clayton C. L., Kleanthous H., Coates P. J., Morgan D. D., Tabaqchali S. Sensitive detection of Helicobacter pylori by using polymerase chain reaction. J Clin Microbiol. 1992 Jan;30(1):192–200. doi: 10.1128/jcm.30.1.192-200.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Fauville-Dufaux M., Maes N., Severin E., Farin C., Serruys E., Struelens M., Younes N., Vincke J. P., De Vos M. J., Bollen A. Rapid identification of Mycobacterium xenopi from bacterial colonies or "Bactec" culture by the polymerase chain reaction and a luminescent sandwich hybridization assay. Res Microbiol. 1995 May;146(4):349–356. doi: 10.1016/0923-2508(96)81058-8. [DOI] [PubMed] [Google Scholar]
  7. Fujita S., Lasker B. A., Lott T. J., Reiss E., Morrison C. J. Microtitration plate enzyme immunoassay to detect PCR-amplified DNA from Candida species in blood. J Clin Microbiol. 1995 Apr;33(4):962–967. doi: 10.1128/jcm.33.4.962-967.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Glupczynski Y., Burette A., Labbe M., Deprez C., De Reuck M., Deltenre M. Campylobacter pylori-associated gastritis: a double-blind placebo-controlled trial with amoxycillin. Am J Gastroenterol. 1988 Apr;83(4):365–372. [PubMed] [Google Scholar]
  9. Hammar M., Tyszkiewicz T., Wadström T., O'Toole P. W. Rapid detection of Helicobacter pylori in gastric biopsy material by polymerase chain reaction. J Clin Microbiol. 1992 Jan;30(1):54–58. doi: 10.1128/jcm.30.1.54-58.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Hentschel E., Brandstätter G., Dragosics B., Hirschl A. M., Nemec H., Schütze K., Taufer M., Wurzer H. Effect of ranitidine and amoxicillin plus metronidazole on the eradication of Helicobacter pylori and the recurrence of duodenal ulcer. N Engl J Med. 1993 Feb 4;328(5):308–312. doi: 10.1056/NEJM199302043280503. [DOI] [PubMed] [Google Scholar]
  11. Labigne A., Cussac V., Courcoux P. Shuttle cloning and nucleotide sequences of Helicobacter pylori genes responsible for urease activity. J Bacteriol. 1991 Mar;173(6):1920–1931. doi: 10.1128/jb.173.6.1920-1931.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Lage A. P., Godfroid E., Fauconnier A., Burette A., Butzler J. P., Bollen A., Glupczynski Y. Diagnosis of Helicobacter pylori infection by PCR: comparison with other invasive techniques and detection of cagA gene in gastric biopsy specimens. J Clin Microbiol. 1995 Oct;33(10):2752–2756. doi: 10.1128/jcm.33.10.2752-2756.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Mabilat C., Desvarenne S., Panteix G., Machabert N., Bernillon M. H., Guardiola G., Cros P. Routine identification of Mycobacterium tuberculosis complex isolates by automated hybridization. J Clin Microbiol. 1994 Nov;32(11):2702–2705. doi: 10.1128/jcm.32.11.2702-2705.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Mallet F., Hebrard C., Brand D., Chapuis E., Cros P., Allibert P., Besnier J. M., Barin F., Mandrand B. Enzyme-linked oligosorbent assay for detection of polymerase chain reaction-amplified human immunodeficiency virus type 1. J Clin Microbiol. 1993 Jun;31(6):1444–1449. doi: 10.1128/jcm.31.6.1444-1449.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Mapstone N. P., Lynch D. A., Lewis F. A., Axon A. T., Tompkins D. S., Dixon M. F., Quirke P. Identification of Helicobacter pylori DNA in the mouths and stomachs of patients with gastritis using PCR. J Clin Pathol. 1993 Jun;46(6):540–543. doi: 10.1136/jcp.46.6.540. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Nilius M., Ströhle A., Bode G., Malfertheiner P. Coccoid like forms (CLF) of Helicobacter pylori. Enzyme activity and antigenicity. Zentralbl Bakteriol. 1993 Sep;280(1-2):259–272. doi: 10.1016/s0934-8840(11)80964-3. [DOI] [PubMed] [Google Scholar]
  17. Price A. B. The Sydney System: histological division. J Gastroenterol Hepatol. 1991 May-Jun;6(3):209–222. doi: 10.1111/j.1440-1746.1991.tb01468.x. [DOI] [PubMed] [Google Scholar]
  18. Resende L. M., Queiroz D. M., Mendes E. N., Rocha G. A., Coelho L. G., Passos M. C., Castro L. P., Oliveira C. A., Lima Júnior G. F. Comparison of the urease test and of direct smear examination in the control of treatment of Helicobacter pylori-induced infection. Braz J Med Biol Res. 1993 Jul;26(7):699–702. [PubMed] [Google Scholar]
  19. Salvi R. J., Ahroon W., Saunders S. S., Arnold S. A. Evoked potentials: computer-automated threshold-tracking procedure using an objective detection criterion. Ear Hear. 1987 Jun;8(3):151–156. [PubMed] [Google Scholar]
  20. Seppälä K., Pikkarainen P., Sipponen P., Kivilaakso E., Gormsen M. H. Cure of peptic gastric ulcer associated with eradication of Helicobacter pylori. Finnish Gastric Ulcer Study Group. Gut. 1995 Jun;36(6):834–837. doi: 10.1136/gut.36.6.834. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Taylor D. E., Eaton M., Chang N., Salama S. M. Construction of a Helicobacter pylori genome map and demonstration of diversity at the genome level. J Bacteriol. 1992 Nov;174(21):6800–6806. doi: 10.1128/jb.174.21.6800-6806.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Valentine J. L., Arthur R. R., Mobley H. L., Dick J. D. Detection of Helicobacter pylori by using the polymerase chain reaction. J Clin Microbiol. 1991 Apr;29(4):689–695. doi: 10.1128/jcm.29.4.689-695.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Westblom T. U., Phadnis S., Yang P., Czinn S. J. Diagnosis of Helicobacter pylori infection by means of a polymerase chain reaction assay for gastric juice aspirates. Clin Infect Dis. 1993 Mar;16(3):367–371. doi: 10.1093/clind/16.3.367. [DOI] [PubMed] [Google Scholar]
  24. van Zwet A. A., Thijs J. C., Kooistra-Smid A. M., Schirm J., Snijder J. A. Sensitivity of culture compared with that of polymerase chain reaction for detection of Helicobacter pylori from antral biopsy samples. J Clin Microbiol. 1993 Jul;31(7):1918–1920. doi: 10.1128/jcm.31.7.1918-1920.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]

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