Skip to main content
Journal of Clinical Microbiology logoLink to Journal of Clinical Microbiology
. 1996 Jun;34(6):1373–1379. doi: 10.1128/jcm.34.6.1373-1379.1996

Molecular typing of Salmonella typhi strains from Dhaka (Bangladesh) and development of DNA probes identifying plasmid-encoded multidrug-resistant isolates.

P W Hermans 1, S K Saha 1, W J van Leeuwen 1, H A Verbrugh 1, A van Belkum 1, W H Goessens 1
PMCID: PMC229027  PMID: 8735083

Abstract

Seventy-eight Salmonella typhi strains isolated in 1994 and 1995 from patients living in Dhaka, Bangladesh, were subjected to phage typing, ribotyping, IS200 fingerprinting, and PCR fingerprinting. The collection displayed a high degree of genetic homogeneity, because restricted numbers of phage types and DNA fingerprints were observed. A significant number of the S. typhi strains (67%) were demonstrated to be multiple drug resistant (MDR). The vast majority of the MDR strains were resistant to chloramphenicol, ampicillin, trimethoprim, streptomycin, sulfamethoxazole, and tetracycline (R type CATmSSuT), a resistance phenotype that has also frequently been observed in India. Only two strains displayed a distinct MDR phenotype, R type AT-mSSuT. Pulsed-field gel electrophoresis demonstrated the presence of large plasmids exclusively in the MDR strains of both R types. The plasmids present in the S. typhi strains of R type CATmSSuT could be conjugated to Escherichia coli and resulted in the complete transfer of the MDR phenotype. PCR fingerprinting allowed discrimination of MDR and susceptible strains. The DNA fragments enabling discrimination of MDR and susceptible S. typhi strains by PCR were useful genetic markers for identifying MDR encoded by large plasmids of the H1 incompatibility group.

Full Text

The Full Text of this article is available as a PDF (1,005.8 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Albert M. J., Haider K., Nahar S., Kibriya A. K., Hossain M. A. Multiresistant Salmonella typhi in Bangladesh. J Antimicrob Chemother. 1991 Apr;27(4):554–555. doi: 10.1093/jac/27.4.554. [DOI] [PubMed] [Google Scholar]
  2. Altwegg M., Hickman-Brenner F. W., Farmer J. J., 3rd Ribosomal RNA gene restriction patterns provide increased sensitivity for typing Salmonella typhi strains. J Infect Dis. 1989 Jul;160(1):145–149. doi: 10.1093/infdis/160.1.145. [DOI] [PubMed] [Google Scholar]
  3. Edelman R., Levine M. M. Summary of an international workshop on typhoid fever. Rev Infect Dis. 1986 May-Jun;8(3):329–349. doi: 10.1093/clinids/8.3.329. [DOI] [PubMed] [Google Scholar]
  4. Gibert I., Barbé J., Casadesús J. Distribution of insertion sequence IS200 in Salmonella and Shigella. J Gen Microbiol. 1990 Dec;136(12):2555–2560. doi: 10.1099/00221287-136-12-2555. [DOI] [PubMed] [Google Scholar]
  5. Giesendorf B. A., van Belkum A., Koeken A., Stegeman H., Henkens M. H., van der Plas J., Goossens H., Niesters H. G., Quint W. G. Development of species-specific DNA probes for Campylobacter jejuni, Campylobacter coli, and Campylobacter lari by polymerase chain reaction fingerprinting. J Clin Microbiol. 1993 Jun;31(6):1541–1546. doi: 10.1128/jcm.31.6.1541-1546.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Grimont F., Grimont P. A. Ribosomal ribonucleic acid gene restriction patterns as potential taxonomic tools. Ann Inst Pasteur Microbiol. 1986 Sep-Oct;137B(2):165–175. doi: 10.1016/s0769-2609(86)80105-3. [DOI] [PubMed] [Google Scholar]
  7. Hermans P. W., Sluijter M., Hoogenboezem T., Heersma H., van Belkum A., de Groot R. Comparative study of five different DNA fingerprint techniques for molecular typing of Streptococcus pneumoniae strains. J Clin Microbiol. 1995 Jun;33(6):1606–1612. doi: 10.1128/jcm.33.6.1606-1612.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Hornick R. B. Selective primary health care: strategies for control of disease in the developing world. XX. Typhoid fever. Rev Infect Dis. 1985 Jul-Aug;7(4):536–546. doi: 10.1093/clinids/7.4.536. [DOI] [PubMed] [Google Scholar]
  9. Lam S., Roth J. R. IS200: a Salmonella-specific insertion sequence. Cell. 1983 Oct;34(3):951–960. doi: 10.1016/0092-8674(83)90552-4. [DOI] [PubMed] [Google Scholar]
  10. Maher K. O., Morris J. G., Jr, Gotuzzo E., Ferreccio C., Ward L. R., Benavente L., Black R. E., Rowe B., Levine M. M. Molecular techniques in the study of Salmonella typhi in epidemiologic studies in endemic areas: comparison with Vi phage typing. Am J Trop Med Hyg. 1986 Jul;35(4):831–835. doi: 10.4269/ajtmh.1986.35.831. [DOI] [PubMed] [Google Scholar]
  11. Mandal B. K. Treatment of multiresistant typhoid fever. Lancet. 1990 Dec 1;336(8727):1383–1383. doi: 10.1016/0140-6736(90)92938-e. [DOI] [PubMed] [Google Scholar]
  12. Mondon P., Thélu J., Lebeau B., Ambroise-Thomas P., Grillot R. Virulence of Aspergillus fumigatus strains investigated by random amplified polymorphic DNA analysis. J Med Microbiol. 1995 Apr;42(4):299–303. doi: 10.1099/00222615-42-4-299. [DOI] [PubMed] [Google Scholar]
  13. Nair S., Poh C. L., Lim Y. S., Tay L., Goh K. T. Genome fingerprinting of Salmonella typhi by pulsed-field gel electrophoresis for subtyping common phage types. Epidemiol Infect. 1994 Dec;113(3):391–402. doi: 10.1017/s0950268800068400. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Nastasi A., Mammina C., Villafrate M. R. rDNA fingerprinting as a tool in epidemiological analysis of Salmonella typhi infections. Epidemiol Infect. 1991 Dec;107(3):565–576. doi: 10.1017/s0950268800049268. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Reeves M. W., Evins G. M., Heiba A. A., Plikaytis B. D., Farmer J. J., 3rd Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis, and proposal of Salmonella bongori comb. nov. J Clin Microbiol. 1989 Feb;27(2):313–320. doi: 10.1128/jcm.27.2.313-320.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Rowe B., Ward L. R., Threlfall E. J. Ciprofloxacin and typhoid fever. Lancet. 1992 Mar 21;339(8795):740–740. [PubMed] [Google Scholar]
  17. Rowe B., Ward L. R., Threlfall E. J. Treatment of multiresistant typhoid fever. Lancet. 1991 Jun 8;337(8754):1422–1422. doi: 10.1016/0140-6736(91)93116-q. [DOI] [PubMed] [Google Scholar]
  18. Saha S. K., Saha S. K. Antibiotic resistance of Salmonella typhi in Bangladesh. J Antimicrob Chemother. 1994 Jan;33(1):190–191. doi: 10.1093/jac/33.1.190. [DOI] [PubMed] [Google Scholar]
  19. Selander R. K., Beltran P., Smith N. H., Helmuth R., Rubin F. A., Kopecko D. J., Ferris K., Tall B. D., Cravioto A., Musser J. M. Evolutionary genetic relationships of clones of Salmonella serovars that cause human typhoid and other enteric fevers. Infect Immun. 1990 Jul;58(7):2262–2275. doi: 10.1128/iai.58.7.2262-2275.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Spread of multiresistant Salmonella typhi. Lancet. 1990 Oct 27;336(8722):1065–1066. [PubMed] [Google Scholar]
  21. Stull T. L., LiPuma J. J., Edlind T. D. A broad-spectrum probe for molecular epidemiology of bacteria: ribosomal RNA. J Infect Dis. 1988 Feb;157(2):280–286. doi: 10.1093/infdis/157.2.280. [DOI] [PubMed] [Google Scholar]
  22. Threlfall E. J., Torre E., Ward L. R., Dávalos-Pérez A., Rowe B., Gibert I. Insertion sequence IS200 fingerprinting of Salmonella typhi: an assessment of epidemiological applicability. Epidemiol Infect. 1994 Apr;112(2):253–261. doi: 10.1017/s0950268800057666. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Threlfall E. J., Torre E., Ward L. R., Rowe B., Gibert I. Insertion sequence IS200 can differentiate drug-resistant and drug-sensitive Salmonella typhi of Vi-phage types E1 and M1. J Med Microbiol. 1993 Dec;39(6):454–458. doi: 10.1099/00222615-39-6-454. [DOI] [PubMed] [Google Scholar]
  24. Threlfall E. J., Ward L. R., Rowe B., Raghupathi S., Chandrasekaran V., Vandepitte J., Lemmens P. Widespread occurrence of multiple drug-resistant Salmonella typhi in India. Eur J Clin Microbiol Infect Dis. 1992 Nov;11(11):990–993. doi: 10.1007/BF01967788. [DOI] [PubMed] [Google Scholar]
  25. Versalovic J., Koeuth T., Lupski J. R. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res. 1991 Dec 25;19(24):6823–6831. doi: 10.1093/nar/19.24.6823. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. van Belkum A., Bax R., Peerbooms P., Goessens W. H., van Leeuwen N., Quint W. G. Comparison of phage typing and DNA fingerprinting by polymerase chain reaction for discrimination of methicillin-resistant Staphylococcus aureus strains. J Clin Microbiol. 1993 Apr;31(4):798–803. doi: 10.1128/jcm.31.4.798-803.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. van Belkum A., Bax R., Prevost G. Comparison of four genotyping assays for epidemiological study of methicillin-resistant Staphylococcus aureus. Eur J Clin Microbiol Infect Dis. 1994 May;13(5):420–424. doi: 10.1007/BF01972002. [DOI] [PubMed] [Google Scholar]
  28. van Soolingen D., de Haas P. E., Hermans P. W., van Embden J. D. DNA fingerprinting of Mycobacterium tuberculosis. Methods Enzymol. 1994;235:196–205. doi: 10.1016/0076-6879(94)35141-4. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Clinical Microbiology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES