Abstract
The hepatic stellate cell (HSC) is the primary cell responsible for the dramatic increase in the synthesis of type I collagen in the cirrhotic liver. Quiescent HSCs contain a low level of collagen alpha1(I) mRNA, while activated HSCs contain about 60- to 70-fold more of this mRNA. The transcription rate of the collagen alpha1(I) gene is only two fold higher in activated HSCs than in quiescent HSCs. In assays using actinomycin D or 5,6-dichlorobenzimidazole riboside collagen alpha1(I) mRNA has estimated half-lives of 1.5 h in quiescent HSCs and 24 h in activated HSCs. Thus, this 16-fold change in mRNA stability is primarily responsible for the increase in collagen alpha1(I) mRNA steady-state level in activated HSCs. We have identified a novel RNA-protein interaction targeted to the C-rich sequence in the collagen alpha1(I) mRNA 3' untranslated region (UTR). This sequence is localized 24 nucleotides 3' to the stop codon. In transient transfection experiments, mutation of this sequence diminished accumulation of an mRNA transcribed from a collagen alpha1(I) minigene and in stable transfections decreased the half-life of collagen alpha1(I) minigene mRNA. Binding to the collagen alpha1(I) 3' UTR is present in cytoplasmic extracts of activated but not quiescent HSCs. It contains as a subunit alphaCP, which is also found in the complex involved in stabilization of alpha-globin mRNA. The auxiliary factors necessary to promote binding of alphaCP to the collagen 3' UTR are distinct from the factors necessary for binding to the alpha-globin sequence. Since alphaCP is expressed in both quiescent and activated HSCs, these auxiliary factors are responsible for the differentially expressed RNA-protein interaction at the collagen alpha1(I) mRNA 3' UTR.
Full Text
The Full Text of this article is available as a PDF (970.7 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Alterman R. B., Ganguly S., Schulze D. H., Marzluff W. F., Schildkraut C. L., Skoultchi A. I. Cell cycle regulation of mouse H3 histone mRNA metabolism. Mol Cell Biol. 1984 Jan;4(1):123–132. doi: 10.1128/mcb.4.1.123. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Armendariz-Borunda J., Katayama K., Seyer J. M. Transcriptional mechanisms of type I collagen gene expression are differentially regulated by interleukin-1 beta, tumor necrosis factor alpha, and transforming growth factor beta in Ito cells. J Biol Chem. 1992 Jul 15;267(20):14316–14321. [PubMed] [Google Scholar]
- Bedalov A., Breault D. T., Sokolov B. P., Lichtler A. C., Bedalov I., Clark S. H., Mack K., Khillan J. S., Woody C. O., Kream B. E. Regulation of the alpha 1(I) collagen promoter in vascular smooth muscle cells. Comparison with other alpha 1(I) collagen-producing cells in transgenic animals and cultured cells. J Biol Chem. 1994 Feb 18;269(7):4903–4909. [PubMed] [Google Scholar]
- Beelman C. A., Parker R. Degradation of mRNA in eukaryotes. Cell. 1995 Apr 21;81(2):179–183. doi: 10.1016/0092-8674(95)90326-7. [DOI] [PubMed] [Google Scholar]
- Boast S., Su M. W., Ramirez F., Sanchez M., Avvedimento E. V. Functional analysis of cis-acting DNA sequences controlling transcription of the human type I collagen genes. J Biol Chem. 1990 Aug 5;265(22):13351–13356. [PubMed] [Google Scholar]
- Bornstein P., McKay J., Morishima J. K., Devarayalu S., Gelinas R. E. Regulatory elements in the first intron contribute to transcriptional control of the human alpha 1(I) collagen gene. Proc Natl Acad Sci U S A. 1987 Dec;84(24):8869–8873. doi: 10.1073/pnas.84.24.8869. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brenner D. A., Rippe R. A., Veloz L. Analysis of the collagen alpha 1(I) promoter. Nucleic Acids Res. 1989 Aug 11;17(15):6055–6064. doi: 10.1093/nar/17.15.6055. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brenner D. A., Veloz L., Jaenisch R., Alcorn J. M. Stimulation of the collagen alpha 1 (I) endogenous gene and transgene in carbon tetrachloride-induced hepatic fibrosis. Hepatology. 1993 Feb;17(2):287–292. [PubMed] [Google Scholar]
- Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem. 1987 Apr;162(1):156–159. doi: 10.1006/abio.1987.9999. [DOI] [PubMed] [Google Scholar]
- Czaja M. J., Weiner F. R., Flanders K. C., Giambrone M. A., Wind R., Biempica L., Zern M. A. In vitro and in vivo association of transforming growth factor-beta 1 with hepatic fibrosis. J Cell Biol. 1989 Jun;108(6):2477–2482. doi: 10.1083/jcb.108.6.2477. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Decker C. J., Parker R. Diversity of cytoplasmic functions for the 3' untranslated region of eukaryotic transcripts. Curr Opin Cell Biol. 1995 Jun;7(3):386–392. doi: 10.1016/0955-0674(95)80094-8. [DOI] [PubMed] [Google Scholar]
- Eckes B., Mauch C., Hüppe G., Krieg T. Differential regulation of transcription and transcript stability of pro-alpha 1(I) collagen and fibronectin in activated fibroblasts derived from patients with systemic scleroderma. Biochem J. 1996 Apr 15;315(Pt 2):549–554. doi: 10.1042/bj3150549. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Focht R. J., Adams S. L. Tissue specificity of type I collagen gene expression is determined at both transcriptional and post-transcriptional levels. Mol Cell Biol. 1984 Sep;4(9):1843–1852. doi: 10.1128/mcb.4.9.1843. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Friedman S. L. Cellular sources of collagen and regulation of collagen production in liver. Semin Liver Dis. 1990 Feb;10(1):20–29. doi: 10.1055/s-2008-1040454. [DOI] [PubMed] [Google Scholar]
- Friedman S. L., Rockey D. C., McGuire R. F., Maher J. J., Boyles J. K., Yamasaki G. Isolated hepatic lipocytes and Kupffer cells from normal human liver: morphological and functional characteristics in primary culture. Hepatology. 1992 Feb;15(2):234–243. doi: 10.1002/hep.1840150211. [DOI] [PubMed] [Google Scholar]
- Friedman S. L., Roll F. J., Boyles J., Bissell D. M. Hepatic lipocytes: the principal collagen-producing cells of normal rat liver. Proc Natl Acad Sci U S A. 1985 Dec;82(24):8681–8685. doi: 10.1073/pnas.82.24.8681. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gallie D. R. The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency. Genes Dev. 1991 Nov;5(11):2108–2116. doi: 10.1101/gad.5.11.2108. [DOI] [PubMed] [Google Scholar]
- Geerts A., Vrijsen R., Rauterberg J., Burt A., Schellinck P., Wisse E. In vitro differentiation of fat-storing cells parallels marked increase of collagen synthesis and secretion. J Hepatol. 1989 Jul;9(1):59–68. doi: 10.1016/0168-8278(89)90076-7. [DOI] [PubMed] [Google Scholar]
- Hahm K., Kim G., Turck C. W., Smale S. T. Isolation of a murine gene encoding a nucleic acid-binding protein with homology to hnRNP K. Nucleic Acids Res. 1993 Aug 11;21(16):3894–3894. doi: 10.1093/nar/21.16.3894. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hanna M. M. Photoaffinity cross-linking methods for studying RNA-protein interactions. Methods Enzymol. 1989;180:383–409. doi: 10.1016/0076-6879(89)80113-2. [DOI] [PubMed] [Google Scholar]
- Hendriks H. F., Verhoofstad W. A., Brouwer A., de Leeuw A. M., Knook D. L. Perisinusoidal fat-storing cells are the main vitamin A storage sites in rat liver. Exp Cell Res. 1985 Sep;160(1):138–149. doi: 10.1016/0014-4827(85)90243-5. [DOI] [PubMed] [Google Scholar]
- Houglum K., Buck M., Alcorn J., Contreras S., Bornstein P., Chojkier M. Two different cis-acting regulatory regions direct cell-specific transcription of the collagen alpha 1(I) gene in hepatic stellate cells and in skin and tendon fibroblasts. J Clin Invest. 1995 Nov;96(5):2269–2276. doi: 10.1172/JCI118282. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hämäläinen L., Oikarinen J., Kivirikko K. I. Synthesis and degradation of type I procollagen mRNAs in cultured human skin fibroblasts and the effect of cortisol. J Biol Chem. 1985 Jan 25;260(2):720–725. [PubMed] [Google Scholar]
- Kawada N., Tran-Thi T. A., Klein H., Decker K. The contraction of hepatic stellate (Ito) cells stimulated with vasoactive substances. Possible involvement of endothelin 1 and nitric oxide in the regulation of the sinusoidal tonus. Eur J Biochem. 1993 Apr 15;213(2):815–823. doi: 10.1111/j.1432-1033.1993.tb17824.x. [DOI] [PubMed] [Google Scholar]
- Kawase T., Shiratori Y., Sugimoto T. Collagen production by rat liver fat-storing cells in primary culture. Exp Cell Biol. 1986;54(4):183–192. doi: 10.1159/000163355. [DOI] [PubMed] [Google Scholar]
- Kiledjian M., Wang X., Liebhaber S. A. Identification of two KH domain proteins in the alpha-globin mRNP stability complex. EMBO J. 1995 Sep 1;14(17):4357–4364. doi: 10.1002/j.1460-2075.1995.tb00110.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Krumm A., Meulia T., Groudine M. Common mechanisms for the control of eukaryotic transcriptional elongation. Bioessays. 1993 Oct;15(10):659–665. doi: 10.1002/bies.950151005. [DOI] [PubMed] [Google Scholar]
- Kunkel T. A. Rapid and efficient site-specific mutagenesis without phenotypic selection. Proc Natl Acad Sci U S A. 1985 Jan;82(2):488–492. doi: 10.1073/pnas.82.2.488. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kähäri V. M., Chen Y. Q., Su M. W., Ramirez F., Uitto J. Tumor necrosis factor-alpha and interferon-gamma suppress the activation of human type I collagen gene expression by transforming growth factor-beta 1. Evidence for two distinct mechanisms of inhibition at the transcriptional and posttranscriptional levels. J Clin Invest. 1990 Nov;86(5):1489–1495. doi: 10.1172/JCI114866. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lissoos T. W., Davis B. H. Pathogenesis of hepatic fibrosis and the role of cytokines. J Clin Gastroenterol. 1992 Jul;15(1):63–67. doi: 10.1097/00004836-199207000-00015. [DOI] [PubMed] [Google Scholar]
- Maher J. J., McGuire R. F. Extracellular matrix gene expression increases preferentially in rat lipocytes and sinusoidal endothelial cells during hepatic fibrosis in vivo. J Clin Invest. 1990 Nov;86(5):1641–1648. doi: 10.1172/JCI114886. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Maher J. J., Zia S., Tzagarakis C. Acetaldehyde-induced stimulation of collagen synthesis and gene expression is dependent on conditions of cell culture: studies with rat lipocytes and fibroblasts. Alcohol Clin Exp Res. 1994 Apr;18(2):403–409. doi: 10.1111/j.1530-0277.1994.tb00033.x. [DOI] [PubMed] [Google Scholar]
- Mak K. M., Leo M. A., Lieber C. S. Alcoholic liver injury in baboons: transformation of lipocytes to transitional cells. Gastroenterology. 1984 Jul;87(1):188–200. [PubMed] [Google Scholar]
- Matunis M. J., Michael W. M., Dreyfuss G. Characterization and primary structure of the poly(C)-binding heterogeneous nuclear ribonucleoprotein complex K protein. Mol Cell Biol. 1992 Jan;12(1):164–171. doi: 10.1128/mcb.12.1.164. [DOI] [PMC free article] [PubMed] [Google Scholar]
- McLaren R. D., Prosser C. G., Grieve R. C., Borissenko M. The use of caprylic acid for the extraction of the immunoglobulin fraction from egg yolk of chickens immunised with ovine alpha-lactalbumin. J Immunol Methods. 1994 Dec 28;177(1-2):175–184. doi: 10.1016/0022-1759(94)90154-6. [DOI] [PubMed] [Google Scholar]
- Milani S., Herbst H., Schuppan D., Hahn E. G., Stein H. In situ hybridization for procollagen types I, III and IV mRNA in normal and fibrotic rat liver: evidence for predominant expression in nonparenchymal liver cells. Hepatology. 1989 Jul;10(1):84–92. doi: 10.1002/hep.1840100117. [DOI] [PubMed] [Google Scholar]
- Milani S., Herbst H., Schuppan D., Kim K. Y., Riecken E. O., Stein H. Procollagen expression by nonparenchymal rat liver cells in experimental biliary fibrosis. Gastroenterology. 1990 Jan;98(1):175–184. doi: 10.1016/0016-5085(90)91307-r. [DOI] [PubMed] [Google Scholar]
- Mooslehner K., Harbers K. Two mRNAs of mouse pro alpha 1(I) collagen gene differ in the size of the 3'-untranslated region. Nucleic Acids Res. 1988 Jan 25;16(2):773–773. doi: 10.1093/nar/16.2.773. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mättä A., Ekholm E., Penttinen R. P. Effect of the 3'-untranslated region on the expression levels and mRNA stability of alpha 1(I) collagen gene. Biochim Biophys Acta. 1995 Feb 21;1260(3):294–300. doi: 10.1016/0167-4781(94)00207-j. [DOI] [PubMed] [Google Scholar]
- Mättä A., Penttinen R. P. A fibroblast protein binds the 3'-untranslated region of pro-alpha 1(I) collagen mRNA. Biochem J. 1993 Nov 1;295(Pt 3):691–698. doi: 10.1042/bj2950691. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mättä A., Penttinen R. P. Nuclear and cytoplasmic alpha 1 (I) collagen mRNA-binding proteins. FEBS Lett. 1994 Feb 28;340(1-2):71–77. doi: 10.1016/0014-5793(94)80175-4. [DOI] [PubMed] [Google Scholar]
- Nakatsukasa H., Evarts R. P., Hsia C. C., Thorgeirsson S. S. Transforming growth factor-beta 1 and type I procollagen transcripts during regeneration and early fibrosis of rat liver. Lab Invest. 1990 Aug;63(2):171–180. [PubMed] [Google Scholar]
- Nehls M. C., Grapilon M. L., Brenner D. A. NF-I/Sp1 switch elements regulate collagen alpha 1(I) gene expression. DNA Cell Biol. 1992 Jul-Aug;11(6):443–452. doi: 10.1089/dna.1992.11.443. [DOI] [PubMed] [Google Scholar]
- Nehls M. C., Rippe R. A., Veloz L., Brenner D. A. Transcription factors nuclear factor I and Sp1 interact with the murine collagen alpha 1 (I) promoter. Mol Cell Biol. 1991 Aug;11(8):4065–4073. doi: 10.1128/mcb.11.8.4065. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Panduro A., Shalaby F., Biempica L., Shafritz D. A. Changes in albumin, alpha-fetoprotein and collagen gene transcription in CCl4-induced hepatic fibrosis. Hepatology. 1988 Mar-Apr;8(2):259–266. doi: 10.1002/hep.1840080212. [DOI] [PubMed] [Google Scholar]
- Panduro A., Shalaby F., Weiner F. R., Biempica L., Zern M. A., Shafritz D. A. Transcriptional switch from albumin to alpha-fetoprotein and changes in transcription of other genes during carbon tetrachloride induced liver regeneration. Biochemistry. 1986 Mar 25;25(6):1414–1420. doi: 10.1021/bi00354a034. [DOI] [PubMed] [Google Scholar]
- Penttinen R. P., Kobayashi S., Bornstein P. Transforming growth factor beta increases mRNA for matrix proteins both in the presence and in the absence of changes in mRNA stability. Proc Natl Acad Sci U S A. 1988 Feb;85(4):1105–1108. doi: 10.1073/pnas.85.4.1105. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Raghow R., Postlethwaite A. E., Keski-Oja J., Moses H. L., Kang A. H. Transforming growth factor-beta increases steady state levels of type I procollagen and fibronectin messenger RNAs posttranscriptionally in cultured human dermal fibroblasts. J Clin Invest. 1987 Apr;79(4):1285–1288. doi: 10.1172/JCI112950. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rhodes K., Rippe R. A., Umezawa A., Nehls M., Brenner D. A., Breindl M. DNA methylation represses the murine alpha 1(I) collagen promoter by an indirect mechanism. Mol Cell Biol. 1994 Sep;14(9):5950–5960. doi: 10.1128/mcb.14.9.5950. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rippe R. A., Almounajed G., Brenner D. A. Sp1 binding activity increases in activated Ito cells. Hepatology. 1995 Jul;22(1):241–251. [PubMed] [Google Scholar]
- Rippe R. A., Lorenzen S. I., Brenner D. A., Breindl M. Regulatory elements in the 5'-flanking region and the first intron contribute to transcriptional control of the mouse alpha 1 type I collagen gene. Mol Cell Biol. 1989 May;9(5):2224–2227. doi: 10.1128/mcb.9.5.2224. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rippe R. A., Umezawa A., Kimball J. P., Breindl M., Brenner D. A. Binding of upstream stimulatory factor to an E-box in the 3'-flanking region stimulates alpha1(I) collagen gene transcription. J Biol Chem. 1997 Jan 17;272(3):1753–1760. doi: 10.1074/jbc.272.3.1753. [DOI] [PubMed] [Google Scholar]
- Rockey D. C., Housset C. N., Friedman S. L. Activation-dependent contractility of rat hepatic lipocytes in culture and in vivo. J Clin Invest. 1993 Oct;92(4):1795–1804. doi: 10.1172/JCI116769. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ross J. mRNA stability in mammalian cells. Microbiol Rev. 1995 Sep;59(3):423–450. doi: 10.1128/mr.59.3.423-450.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rossouw C. M., Vergeer W. P., du Plooy S. J., Bernard M. P., Ramirez F., de Wet W. J. DNA sequences in the first intron of the human pro-alpha 1(I) collagen gene enhance transcription. J Biol Chem. 1987 Nov 5;262(31):15151–15157. [PubMed] [Google Scholar]
- Scheper W., Meinsma D., Holthuizen P. E., Sussenbach J. S. Long-range RNA interaction of two sequence elements required for endonucleolytic cleavage of human insulin-like growth factor II mRNAs. Mol Cell Biol. 1995 Jan;15(1):235–245. doi: 10.1128/mcb.15.1.235. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Slack J. L., Liska D. J., Bornstein P. An upstream regulatory region mediates high-level, tissue-specific expression of the human alpha 1(I) collagen gene in transgenic mice. Mol Cell Biol. 1991 Apr;11(4):2066–2074. doi: 10.1128/mcb.11.4.2066. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Slack J. L., Liska D. J., Bornstein P. Regulation of expression of the type I collagen genes. Am J Med Genet. 1993 Jan 15;45(2):140–151. doi: 10.1002/ajmg.1320450203. [DOI] [PubMed] [Google Scholar]
- Slack J. L., Parker M. I., Robinson V. R., Bornstein P. Regulation of collagen I gene expression by ras. Mol Cell Biol. 1992 Oct;12(10):4714–4723. doi: 10.1128/mcb.12.10.4714. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sokolov B. P., Ala-Kokko L., Dhulipala R., Arita M., Khillan J. S., Prockop D. J. Tissue-specific expression of the gene for type I procollagen (COL1A1) in transgenic mice. Only 476 base pairs of the promoter are required if collagen genes are used as reporters. J Biol Chem. 1995 Apr 21;270(16):9622–9629. doi: 10.1074/jbc.270.16.9622. [DOI] [PubMed] [Google Scholar]
- Tsutsumi M., Takada A., Takase S. Characterization of desmin-positive rat liver sinusoidal cells. Hepatology. 1987 Mar-Apr;7(2):277–284. doi: 10.1002/hep.1840070212. [DOI] [PubMed] [Google Scholar]
- Wang X., Kiledjian M., Weiss I. M., Liebhaber S. A. Detection and characterization of a 3' untranslated region ribonucleoprotein complex associated with human alpha-globin mRNA stability. Mol Cell Biol. 1995 Mar;15(3):1769–1777. doi: 10.1128/mcb.15.3.1769. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Weiner F. R., Giambrone M. A., Czaja M. J., Shah A., Annoni G., Takahashi S., Eghbali M., Zern M. A. Ito-cell gene expression and collagen regulation. Hepatology. 1990 Jan;11(1):111–117. doi: 10.1002/hep.1840110119. [DOI] [PubMed] [Google Scholar]
- Weiner F. R., Shah A., Biempica L., Zern M. A., Czaja M. J. The effects of hepatic fibrosis on Ito cell gene expression. Matrix. 1992 Feb;12(1):36–43. doi: 10.1016/s0934-8832(11)80102-2. [DOI] [PubMed] [Google Scholar]
- Weiss I. M., Liebhaber S. A. Erythroid cell-specific determinants of alpha-globin mRNA stability. Mol Cell Biol. 1994 Dec;14(12):8123–8132. doi: 10.1128/mcb.14.12.8123. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wu H., Bateman J. F., Schnieke A., Sharpe A., Barker D., Mascara T., Eyre D., Bruns R., Krimpenfort P., Berns A. Human-mouse interspecies collagen I heterotrimer is functional during embryonic development of Mov13 mutant mouse embryos. Mol Cell Biol. 1990 Apr;10(4):1452–1460. doi: 10.1128/mcb.10.4.1452. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yamada Y., Kühn K., de Crombrugghe B. A conserved nucleotide sequence, coding for a segment of the C-propeptide, is found at the same location in different collagen genes. Nucleic Acids Res. 1983 May 11;11(9):2733–2744. doi: 10.1093/nar/11.9.2733. [DOI] [PMC free article] [PubMed] [Google Scholar]
- de Leeuw A. M., McCarthy S. P., Geerts A., Knook D. L. Purified rat liver fat-storing cells in culture divide and contain collagen. Hepatology. 1984 May-Jun;4(3):392–403. doi: 10.1002/hep.1840040307. [DOI] [PubMed] [Google Scholar]