Abstract
The extracellular nuclease of Serratia marcescens is one of a wide variety of enzymes secreted into the growth medium. Its appearance occurs late in the growth of a culture, and its gene, nucA, is transcriptionally regulated in a complex fashion by growth phase and other factors. Pulse-labeling studies reveal that extracellular secretion of nuclease occurs as a two-step process. In the first step, nuclease is rapidly translocated across the cytoplasmic membrane into the periplasm, where it accumulates as a mature active nuclease. A precursor protein, nuclease still carrying its signal sequence, was detected in the presence of carbonyl cyanide m-chlorophenylhydrazone or sodium azide, suggesting that this initial translocation and signal processing step involves an energy-dependent and Sec-dependent pathway in S. marcescens. The second step of secretion across the outer membrane is a slow process requiring between 30 to 120 min, depending on growth conditions.
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- Akatsuka H., Kawai E., Omori K., Komatsubara S., Shibatani T., Tosa T. The lipA gene of Serratia marcescens which encodes an extracellular lipase having no N-terminal signal peptide. J Bacteriol. 1994 Apr;176(7):1949–1956. doi: 10.1128/jb.176.7.1949-1956.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ball T. K., Saurugger P. N., Benedik M. J. The extracellular nuclease gene of Serratia marcescens and its secretion from Escherichia coli. Gene. 1987;57(2-3):183–192. doi: 10.1016/0378-1119(87)90121-1. [DOI] [PubMed] [Google Scholar]
- Ball T. K., Suh Y., Benedik M. J. Disulfide bonds are required for Serratia marcescens nuclease activity. Nucleic Acids Res. 1992 Oct 11;20(19):4971–4974. doi: 10.1093/nar/20.19.4971. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ball T. K., Wasmuth C. R., Braunagel S. C., Benedik M. J. Expression of Serratia marcescens extracellular proteins requires recA. J Bacteriol. 1990 Jan;172(1):342–349. doi: 10.1128/jb.172.1.342-349.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Biedermann K., Jepsen P. K., Riise E., Svendsen I. Purification and characterization of a Serratia marcescens nuclease produced by Escherichia coli. Carlsberg Res Commun. 1989;54(1):17–27. doi: 10.1007/BF02910469. [DOI] [PubMed] [Google Scholar]
- Bromke B. J., Hammel J. M. Regulation of extracellular protease formation by Serratia marcescens. Can J Microbiol. 1979 Jan;25(1):47–52. doi: 10.1139/m79-008. [DOI] [PubMed] [Google Scholar]
- Broome-Smith J. K., Spratt B. G. A vector for the construction of translational fusions to TEM beta-lactamase and the analysis of protein export signals and membrane protein topology. Gene. 1986;49(3):341–349. doi: 10.1016/0378-1119(86)90370-7. [DOI] [PubMed] [Google Scholar]
- Chen Y. C., Shipley G. L., Ball T. K., Benedik M. J. Regulatory mutants and transcriptional control of the Serratia marcescens extracellular nuclease gene. Mol Microbiol. 1992 Mar;6(5):643–651. doi: 10.1111/j.1365-2958.1992.tb01512.x. [DOI] [PubMed] [Google Scholar]
- Dums F., Dow J. M., Daniels M. J. Structural characterization of protein secretion genes of the bacterial phytopathogen Xanthomonas campestris pathovar campestris: relatedness to secretion systems of other gram-negative bacteria. Mol Gen Genet. 1991 Oct;229(3):357–364. doi: 10.1007/BF00267456. [DOI] [PubMed] [Google Scholar]
- Eaves G. N., Jeffries C. D. ISOLATION AND PROPERTIES OF AN EXOCELLULAR NUCLEASE OF SERRATIA MARCESCENS. J Bacteriol. 1963 Feb;85(2):273–278. doi: 10.1128/jb.85.2.273-278.1963. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Filimonova M. N., Dement'ev A. A., Leshchinskaia I. B., Bakulina G. Iu, Shliapnikov S. V. Vydelenie i kharakteristika izoform vnekletochnoi nuklezy Serratia marcescens. Biokhimiia. 1991 Mar;56(3):508–520. [PubMed] [Google Scholar]
- Filloux A., Bally M., Ball G., Akrim M., Tommassen J., Lazdunski A. Protein secretion in gram-negative bacteria: transport across the outer membrane involves common mechanisms in different bacteria. EMBO J. 1990 Dec;9(13):4323–4329. doi: 10.1002/j.1460-2075.1990.tb07881.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fortin Y., Phoenix P., Drapeau G. R. Mutations conferring resistance to azide in Escherichia coli occur primarily in the secA gene. J Bacteriol. 1990 Nov;172(11):6607–6610. doi: 10.1128/jb.172.11.6607-6610.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Friedhoff P., Gimadutdinow O., Pingoud A. Identification of catalytically relevant amino acids of the extracellular Serratia marcescens endonuclease by alignment-guided mutagenesis. Nucleic Acids Res. 1994 Aug 25;22(16):3280–3287. doi: 10.1093/nar/22.16.3280. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Givskov M., Eberl L., Christiansen G., Benedik M. J., Molin S. Induction of phospholipase- and flagellar synthesis in Serratia liquefaciens is controlled by expression of the flagellar master operon flhD. Mol Microbiol. 1995 Feb;15(3):445–454. doi: 10.1111/j.1365-2958.1995.tb02258.x. [DOI] [PubMed] [Google Scholar]
- Givskov M., Olsen L., Molin S. Cloning and expression in Escherichia coli of the gene for extracellular phospholipase A1 from Serratia liquefaciens. J Bacteriol. 1988 Dec;170(12):5855–5862. doi: 10.1128/jb.170.12.5855-5862.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- He S. Y., Lindeberg M., Chatterjee A. K., Collmer A. Cloned Erwinia chrysanthemi out genes enable Escherichia coli to selectively secrete a diverse family of heterologous proteins to its milieu. Proc Natl Acad Sci U S A. 1991 Feb 1;88(3):1079–1083. doi: 10.1073/pnas.88.3.1079. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Heller K. B. Lipolytic activity copurified with the outer membrane of Serratia marcescens. J Bacteriol. 1979 Dec;140(3):1120–1122. doi: 10.1128/jb.140.3.1120-1122.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hines D. A., Saurugger P. N., Ihler G. M., Benedik M. J. Genetic analysis of extracellular proteins of Serratia marcescens. J Bacteriol. 1988 Sep;170(9):4141–4146. doi: 10.1128/jb.170.9.4141-4146.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hirst T. R., Holmgren J. Transient entry of enterotoxin subunits into the periplasm occurs during their secretion from Vibrio cholerae. J Bacteriol. 1987 Mar;169(3):1037–1045. doi: 10.1128/jb.169.3.1037-1045.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hu N. T., Hung M. N., Chiou S. J., Tang F., Chiang D. C., Huang H. Y., Wu C. Y. Cloning and characterization of a gene required for the secretion of extracellular enzymes across the outer membrane by Xanthomonas campestris pv. campestris. J Bacteriol. 1992 Apr;174(8):2679–2687. doi: 10.1128/jb.174.8.2679-2687.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hultgren S. J., Jacob-Dubuisson F., Jones C. H., Bränden C. I. PapD and superfamily of periplasmic immunoglobulin-like pilus chaperones. Adv Protein Chem. 1993;44:99–123. doi: 10.1016/s0065-3233(08)60565-3. [DOI] [PubMed] [Google Scholar]
- Jacob-Dubuisson F., Striker R., Hultgren S. J. Chaperone-assisted self-assembly of pili independent of cellular energy. J Biol Chem. 1994 Apr 29;269(17):12447–12455. [PubMed] [Google Scholar]
- Jiang B., Howard S. P. The Aeromonas hydrophila exeE gene, required both for protein secretion and normal outer membrane biogenesis, is a member of a general secretion pathway. Mol Microbiol. 1992 May;6(10):1351–1361. doi: 10.1111/j.1365-2958.1992.tb00856.x. [DOI] [PubMed] [Google Scholar]
- Jin S., Chen Y., Christie G. E., Benedik M. J. Regulation of the Serratia marcescens extracellular nuclease: positive control by a homolog of P2 Ogr encoded by a cryptic prophage. J Mol Biol. 1996 Feb 23;256(2):264–278. doi: 10.1006/jmbi.1996.0084. [DOI] [PubMed] [Google Scholar]
- Jones J. D., Grady K. L., Suslow T. V., Bedbrook J. R. Isolation and characterization of genes encoding two chitinase enzymes from Serratia marcescens. EMBO J. 1986 Mar;5(3):467–473. doi: 10.1002/j.1460-2075.1986.tb04235.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Koronakis V., Hughes C., Koronakis E. Energetically distinct early and late stages of HlyB/HlyD-dependent secretion across both Escherichia coli membranes. EMBO J. 1991 Nov;10(11):3263–3272. doi: 10.1002/j.1460-2075.1991.tb04890.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kunkel T. A., Roberts J. D., Zakour R. A. Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol. 1987;154:367–382. doi: 10.1016/0076-6879(87)54085-x. [DOI] [PubMed] [Google Scholar]
- Li X., Tetling S., Winkler U. K., Jaeger K. E., Benedik M. J. Gene cloning, sequence analysis, purification, and secretion by Escherichia coli of an extracellular lipase from Serratia marcescens. Appl Environ Microbiol. 1995 Jul;61(7):2674–2680. doi: 10.1128/aem.61.7.2674-2680.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lindeberg M., Collmer A. Analysis of eight out genes in a cluster required for pectic enzyme secretion by Erwinia chrysanthemi: sequence comparison with secretion genes from other gram-negative bacteria. J Bacteriol. 1992 Nov;174(22):7385–7397. doi: 10.1128/jb.174.22.7385-7397.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lory S. Determinants of extracellular protein secretion in gram-negative bacteria. J Bacteriol. 1992 Jun;174(11):3423–3428. doi: 10.1128/jb.174.11.3423-3428.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lu H. M., Mizushima S., Lory S. A periplasmic intermediate in the extracellular secretion pathway of Pseudomonas aeruginosa exotoxin A. J Bacteriol. 1993 Nov;175(22):7463–7467. doi: 10.1128/jb.175.22.7463-7467.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Létoffé S., Ghigo J. M., Wandersman C. Secretion of the Serratia marcescens HasA protein by an ABC transporter. J Bacteriol. 1994 Sep;176(17):5372–5377. doi: 10.1128/jb.176.17.5372-5377.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Miller M. D., Krause K. L. Identification of the Serratia endonuclease dimer: structural basis and implications for catalysis. Protein Sci. 1996 Jan;5(1):24–33. doi: 10.1002/pro.5560050104. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Miller M. D., Tanner J., Alpaugh M., Benedik M. J., Krause K. L. 2.1 A structure of Serratia endonuclease suggests a mechanism for binding to double-stranded DNA. Nat Struct Biol. 1994 Jul;1(7):461–468. doi: 10.1038/nsb0794-461. [DOI] [PubMed] [Google Scholar]
- Miyazaki H., Yanagida N., Horinouchi S., Beppu T. Characterization of the precursor of Serratia marcescens serine protease and COOH-terminal processing of the precursor during its excretion through the outer membrane of Escherichia coli. J Bacteriol. 1989 Dec;171(12):6566–6572. doi: 10.1128/jb.171.12.6566-6572.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Monreal J., Reese E. T. The chitinase of Serratia marcescens. Can J Microbiol. 1969 Jul;15(7):689–696. doi: 10.1139/m69-122. [DOI] [PubMed] [Google Scholar]
- Nakahama K., Yoshimura K., Marumoto R., Kikuchi M., Lee I. S., Hase T., Matsubara H. Cloning and sequencing of Serratia protease gene. Nucleic Acids Res. 1986 Jul 25;14(14):5843–5855. doi: 10.1093/nar/14.14.5843. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Neidhardt F. C., Bloch P. L., Smith D. F. Culture medium for enterobacteria. J Bacteriol. 1974 Sep;119(3):736–747. doi: 10.1128/jb.119.3.736-747.1974. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Neu H. C., Heppel L. A. The release of enzymes from Escherichia coli by osmotic shock and during the formation of spheroplasts. J Biol Chem. 1965 Sep;240(9):3685–3692. [PubMed] [Google Scholar]
- Oliver D. B., Cabelli R. J., Dolan K. M., Jarosik G. P. Azide-resistant mutants of Escherichia coli alter the SecA protein, an azide-sensitive component of the protein export machinery. Proc Natl Acad Sci U S A. 1990 Nov;87(21):8227–8231. doi: 10.1073/pnas.87.21.8227. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pugsley A. P. The complete general secretory pathway in gram-negative bacteria. Microbiol Rev. 1993 Mar;57(1):50–108. doi: 10.1128/mr.57.1.50-108.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Randall L. L., Hardy S. J. Correlation of competence for export with lack of tertiary structure of the mature species: a study in vivo of maltose-binding protein in E. coli. Cell. 1986 Sep 12;46(6):921–928. doi: 10.1016/0092-8674(86)90074-7. [DOI] [PubMed] [Google Scholar]
- Reeves P. J., Whitcombe D., Wharam S., Gibson M., Allison G., Bunce N., Barallon R., Douglas P., Mulholland V., Stevens S. Molecular cloning and characterization of 13 out genes from Erwinia carotovora subspecies carotovora: genes encoding members of a general secretion pathway (GSP) widespread in gram-negative bacteria. Mol Microbiol. 1993 May;8(3):443–456. doi: 10.1111/j.1365-2958.1993.tb01589.x. [DOI] [PubMed] [Google Scholar]
- Salmond G. P., Reeves P. J. Membrane traffic wardens and protein secretion in gram-negative bacteria. Trends Biochem Sci. 1993 Jan;18(1):7–12. doi: 10.1016/0968-0004(93)90080-7. [DOI] [PubMed] [Google Scholar]
- Schatz P. J., Beckwith J. Genetic analysis of protein export in Escherichia coli. Annu Rev Genet. 1990;24:215–248. doi: 10.1146/annurev.ge.24.120190.001243. [DOI] [PubMed] [Google Scholar]
- Schiebel E., Schwarz H., Braun V. Subcellular location and unique secretion of the hemolysin of Serratia marcescens. J Biol Chem. 1989 Sep 25;264(27):16311–16320. [PubMed] [Google Scholar]
- Suh Y., Alpaugh M., Krause K. L., Benedik M. J. Differential secretion of isoforms of Serratia marcescens extracellular nuclease. Appl Environ Microbiol. 1995 Nov;61(11):4083–4088. doi: 10.1128/aem.61.11.4083-4088.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Suh Y., Benedik M. J. Production of active Serratia marcescens metalloprotease from Escherichia coli by alpha-hemolysin HlyB and HlyD. J Bacteriol. 1992 Apr;174(7):2361–2366. doi: 10.1128/jb.174.7.2361-2366.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Takagi T., Kisumi M. Isolation of a versatile Serratia marcescens mutant as a host and molecular cloning of the aspartase gene. J Bacteriol. 1985 Jan;161(1):1–6. doi: 10.1128/jb.161.1.1-6.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tommassen J., Filloux A., Bally M., Murgier M., Lazdunski A. Protein secretion in Pseudomonas aeruginosa. FEMS Microbiol Rev. 1992 Sep;9(1):73–90. doi: 10.1016/0378-1097(92)90336-m. [DOI] [PubMed] [Google Scholar]
- Wandersman C. Secretion across the bacterial outer membrane. Trends Genet. 1992 Sep;8(9):317–322. doi: 10.1016/0168-9525(92)90264-5. [DOI] [PubMed] [Google Scholar]
- Winkler U., Timmis K. Pleiotropic mutations in Serratia marcescens which increase the synthesis of certain exocellular proteins and the rate of spontaneous prophage induction. Mol Gen Genet. 1973 Aug 17;124(3):197–206. doi: 10.1007/BF00293091. [DOI] [PubMed] [Google Scholar]