The decatenation checkpoint

Abstract

The decatenation checkpoint delays entry into mitosis until the chromosomes have been disentangled. Deficiency in or bypass of the decatenation checkpoint can cause chromosome breakage and nondisjunction during mitosis, which results in aneuploidy and chromosome rearrangements in the daughter cells. A deficiency in the decatenation checkpoint has been reported in lung and bladder cancer cell lines and may contribute to the accumulation of chromosome aberrations that commonly occur during tumour progression. A checkpoint deficiency has also been documented in cultured stem and progenitor cells, and cancer stem cells are likely to be derived from stem and progenitor cells that lack an effective decatenation checkpoint. An inefficient decatenation checkpoint is likely to be a source of the chromosome aberrations that are common features of most tumours, but an inefficient decatenation checkpoint in cancer stem cells could also provide a potential target for chemotherapy.

FUNCTION OF THE DECATENATION CHECKPOINT

Entanglements of sister chromatids are a consequence of DNA replication, and nonreplicative catenations arise incidentally during interphase (Gimenez-Abian et al, 2000). Gain and loss of whole chromosomes and chromosome fragments result when cells complete mitosis in the presence of entangled chromosomes (Figure 1A). The G₂ phase decatenation checkpoint delays entry into mitosis until chromosomes have been decatenated (disentangled) by topoisomerase II (topo II) (Downes et al, 1994). The decatenation checkpoint is distinct from the DNA damage checkpoint, the chromatin deacetylation checkpoint, the spindle assembly checkpoint and other G₂/M checkpoints.

Figure 1.

(A) Mitosis in the presence of entangled chromosomes leads to aneuploidy. The decatenation checkpoint guards against nondisjunction and chromosome breakage that occur when the cell enters mitosis before the chromosomes have been sufficiently decatenated by Topo II. (B) Working model of decatenation checkpoint signalling. (C) Checkpoint deficiency in cancer cells could result in additional chromosome imbalances that increase tumour malignancy (top). The presence of additional chromosome aberrations is represented by darker colour of the nucleus. Decatenation checkpoint deficiency is an inherent feature of stem and progenitor cells and may lead to the formation of cancer stem cells (bottom). Chemotherapy that targets the decatenation checkpoint may efficiently target cancer cells and CSCs.

Topoisomerase II enzymes disentangle chromosomes by passing one double helix through a transient double-strand break (DSB) in another double helix and then resealing the break. The classical topo II inhibitors, which include etoposide (VP-16), teniposide (VM-26), amsacrine, and adriamycin/doxorubicin, generate massive numbers of DSBs and trigger the G₂ phase DNA damage checkpoint (Kaufmann and Kies, 1998). Studies with these topo II poisons precluded the discovery of the decatenation checkpoint. In contrast, the catalytic inhibitors, which include ICRF-193 and related bisdioxopiperazines, inhibit topo II before DSB formation and activate the decatenation checkpoint, but not the DNA damage checkpoint (Downes et al, 1994; Roca et al, 1994). The decatenation checkpoint is typically studied with the bisdioxopiperazine topo II inhibitors.

CHECKPOINT DEFICIENCY AND CHROMOSOME INSTABILITY

Deficiency in or bypass of the decatenation checkpoint can directly result in chromosome instability because cells can complete division in the presence of entangled chromosomes (Figure 1A). Chromosome breakage and nondisjunction at anaphase leads to chromosome translocations and other aberrations in daughter cells. These chromosome imbalances have been observed in several cell types following bisdioxopiperazine inhibition of topo II (Gorbsky, 1994; Ishida et al, 1994; Deming et al, 2002; Damelin et al, 2005). The spindle checkpoint would be expected to prevent anaphase after failure or bypass of the decatenation checkpoint. However, the spindle checkpoint is inefficient when the decatenation checkpoint has failed. A possible explanation is that the spindle checkpoint is not activated because the tension generated by the chromosome entanglements is not distinguished from the tension generated by amphitelic attachment (Damelin et al, 2005). This idea is supported by the result that spindle checkpoint activation in cohesin-deficient cells was relieved by the bisdioxopiperazine inhibition of topo II (Vagnarelli et al, 2004). It is also possible that the spindle checkpoint delays cell cycle progression only transiently and is eventually bypassed (Andreassen et al, 2003).

Specific types of genetic changes are predicted to result from an inefficient decatenation checkpoint. The gain and loss of whole chromosomes and chromosome fragments are expected, while point mutations and mitotic recombination events are not. An analysis of loss-of-heterozygosity (LOH) mutations found that in mouse embryonic stem (ES) cells, the majority of LOH mutations were attributable to nondisjunction, whereas in mouse embryonic fibroblasts, LOH owing to nondisjunction was not observed (Cervantes et al, 2002). The LOH events in ES cells are likely to arise from the decatenation checkpoint deficiency in those cells.

CHECKPOINT STATUS IN CANCER CELLS

The decatenation checkpoint has been observed in many mammalian cell types. The original report documented a functional checkpoint in the Indian muntjac cells, PtK2 rat kangaroo cells, Chinese hamster ovary cells, SV-MRC5-transformed human fibroblasts, MSU1.1 v-myc-immortalised human fibroblasts, and HeLa human cervical carcinoma cell lines (Downes et al, 1994). Subsequently, the checkpoint was observed in human lymphoblastoid cell lines (Deming et al, 2001), mouse embryonic fibroblasts (Damelin et al, 2005), and primary cultures and strains of human uroepithelial cells (Doherty et al, 2003) and human fibroblasts (Kaufmann and Kies, 1998; Deming et al, 2001; Franchitto et al, 2003; Damelin et al, 2005).

It was surprising to find that wild-type stem and progenitor cells have an inherent deficiency in the decatenation checkpoint and complete cell division in the presence of entangled chromosomes (Damelin et al, 2005). The deficiency was documented in mouse ES cells, mouse neural progenitors, and human CD34+ haematopoietic progenitors. When ES cells were induced to differentiate, the efficiency of the checkpoint increased, which indicated that the observed deficiency is a feature of the undifferentiated state.

A deficiency in the decatenation checkpoint has been reported in bladder and lung cancer cells. The decatenation checkpoint was found to be impaired in all five human bladder transitional cell carcinoma lines tested (Doherty et al, 2003) and in three human lung cancer cell lines, whereas three other lung cancer cell lines exhibited normal decatenation checkpoint function (Nakagawa et al, 2004). In these studies, there was a lack of correlation between deficiency in the decatenation checkpoint and deficiency in the other cell cycle checkpoints that were assessed.

WHY A DEFICIENCY IN STEM AND PROGENITOR CELLS?

Although it seems paradoxical that stem and progenitor cells should have a checkpoint deficiency and be susceptible to increased genome instability, certain aspects of stem cell biology must be considered in the context of cell cycle progression. Recent studies have documented distinctive properties of nuclear architecture and chromatin structure in stem cells (Azuara et al, 2006; Bernstein et al, 2006; Meshorer and Misteli, 2006). These characteristics of stemness may not be compatible with an effective decatenation checkpoint; in other words, it is possible that stem cells cannot simultaneously maintain multipotency and the decatenation checkpoint. For example, certain characteristics of stem cell chromatin might mimic the molecular stimulus of the checkpoint and would indiscriminately trigger the checkpoint if the pathway were intact. Alternatively, expression of a factor that is required for an efficient decatenation checkpoint might activate other inappropriate signalling pathways in undifferentiated cells.

Another relevant aspect of stem cell biology – independent of the first – is the heterogeneity, including the range of lifespan, of the many types of cells that are termed stem cells. The stem and progenitor cells that can be isolated and expanded in culture, such as ES cells, embryonal germ (EG) cells, neural progenitors, trophoblast stem cells, and CD34+ haematopoietic cells, are derived from cell types that normally undergo only a few cell divisions in vivo. In contrast, true stem cells, which have proved difficult to isolate, are long-lived populations that replenish specific cell lineages throughout the life of the organism. Transient stem and progenitor cells undergo fewer cell divisions and are at reduced risk of chromosome aberrations owing to an inefficient decatenation checkpoint and may not be under selection for an effective checkpoint; the incidence of chromosome aberrations from the deficiency will be directly proportional to the number of divisions that the cells undergo. A prediction of this model is that long-lived stem cells have an efficient decatenation checkpoint, whereas the transit amplifying stem and progenitor cells do not.

MOLECULAR MECHANISM OF THE DECATENATION CHECKPOINT

The current understanding of the molecular control of the decatenation checkpoint is outlined in Figure 1B. Decatenation checkpoint signalling depends on ATR (ATM- and Rad3-related) kinase, as overexpression of a dominant-negative ATR prevented an efficient response (Deming et al, 2001). The checkpoint response does not require ATM kinase (Deming et al, 2001). Caffeine, which inhibits certain signalling molecules including ATR, was shown to override the G₂ delay (Downes et al, 1994). ATR mediates the delay by inhibition of Plk1 (Polo-like kinase 1); Plk1 activity was reduced following ICRF-193 treatment, and conversely the checkpoint response was attenuated when active Plk1 was overexpressed (Deming et al, 2002). During normal cell cycle progression, Plk1 may phosphorylate cyclin B1 to cause the nuclear localisation of cyclin B1/Cdk1 complexes and promote mitosis. Expression of a constitutively nuclear cyclin B1 overrode the decatenation checkpoint (Deming et al, 2002).

Checkpoint function also requires BRCA1: a checkpoint defect was observed in HCC1937 cells (which have a homozygous BRCA1 mutation) and the defect was reversed when wild-type BRCA1 was expressed in those cells (Deming et al, 2001). Checkpoint activity was found to be impaired in cells from four Werner Syndrome patients and was restored when WRN (Werner helicase) was expressed, which indicated a role for WRN in the decatenation checkpoint (Franchitto et al, 2003). Werner helicase may be required for the phosphorylation of BRCA1 in response to entangled chromatids (Franchitto et al, 2003).

The molecular stimulus that activates the decatenation checkpoint is not understood. One possibility is that a signal emanates from sites of active decatenation, and mitotic entry is delayed until the signal abates. It has been proposed that two factors that are involved in checkpoint signalling, BRCA1 and WRN, function in the decatenation process itself (Franchitto et al, 2003; Lou et al, 2005). A role for topo II itself in checkpoint signalling has also been suggested (Gimenez-Abian et al, 2000). Alternatively, factors that are not involved in decatenation could be sensitive to the degree of chromosome entanglement and initiate checkpoint signalling.

Decatenation by topo II continues until the onset of anaphase, and the poleward forces on the chromatids may be required to drive decatenation to completion (Holm et al, 1985; Marians, 1987; Uemura et al, 1987; Shamu and Murray, 1992). The decatenation checkpoint therefore monitors the approach to completion, not the full completion, of chromosome disentanglement (Downes et al, 1994). A similar threshold basis for checkpoint activation has been documented for other cell cycle checkpoints, notably the DNA replication checkpoint in which activation requires a certain quantity of single-stranded DNA (Branzei and Foiani, 2005).

RELATIONSHIP WITH OTHER G₂ PHASE CHECKPOINTS

Several cell cycle checkpoints guard entry into mitosis or monitor progression through mitosis, and each checkpoint is distinguishable from the others in terms of signalling components. Observations at the cellular and molecular levels have distinguished the decatenation and DNA damage checkpoints. Bladder and lung cancer cell lines exhibited different responses to ICRF-193 treatment and irradiation (Doherty et al, 2003; Nakagawa et al, 2004). In DM87 Indian muntjac cells, in which caffeine cannot override the delay induced by irradiation or etoposide treatment (for unknown reasons), caffeine did override the delay induced by ICRF-193 treatment (Downes et al, 1994). Mouse ES cells delayed entry into mitosis in response to etoposide treatment but not ICRF-193 treatment (Damelin et al, 2005). The results with DM87 and ES cells are particularly robust because opposite responses were observed with ICRF-193 and etoposide, both of which specifically inhibit topo II activity. If ICRF-193 does cause any DNA damage, the amount of damage is insignificant by comparison to the damage caused by topo II poisons and is below the threshold that is necessary to trigger the DNA damage checkpoint.

The decatenation checkpoint does not require ATM kinase function, as the checkpoint was intact in cells from three ataxia telangiectasia (A-T) patients with mutations in ATM (Deming et al, 2001). In contrast, the DNA damage checkpoint requires ATM and was impaired in A-T cells. Phosphorylation of the Cds1 and Chk1 effector kinases was observed in lymphoblastoid lines following DNA damage, but not after ICRF-193 treatment (Deming et al, 2001). In addition, Cdk1 activity was reduced in response to DNA damage but not ICRF-193 treatment. These data revealed specific differences in the signalling pathways of the decatenation and DNA damage checkpoints.

It is important to consider the decatenation checkpoint in comparison to a recently characterised ICRF-193-induced metaphase arrest (Skoufias et al, 2004), which is probably distinct from the decatenation checkpoint. It will be important to clarify the relationship between the decatenation checkpoint (which blocks entry into mitosis) and the metaphase arrest (during mitosis), and to determine whether the metaphase arrest is a bona fide checkpoint that involves active signalling or whether it reflects a physical obstacle to chromatid segregation that is imposed by chromosome entanglements (Clarke et al, 1993).

It has been proposed that the G₂ delay induced by chromosome entanglements is controlled by a more general antephase checkpoint that responds to aberrant chromatin topology and is mediated by p38 MAP kinase (Mikhailov et al, 2004). A prophase delay can be induced by inhibitors of topo II, inhibitors of histone deacetylases, and osmotic stress. However, chemical genetics screens indicated that the decatenation checkpoint and chromatin deacetylation checkpoint are distinct (Haggarty et al, 2003). It is possible that p38 signalling is common to several G₂/M checkpoints that are distinguished by other signalling events. One study proposed that p38 is an ‘early sensor’ for cell damage, although only for certain types of stress or damage (Bulavin et al, 2001). The antephase checkpoint was proposed to be independent of ATM and the DNA damage checkpoint yet was induced by treatments that produced large quantities of DSBs (Mikhailov et al, 2004); if the damage and antephase checkpoints were independent, then the damage checkpoint impairment in A-T cells (with mutation in ATM) would be masked by the p38-mediated response, but A-T cells consistently exhibit a checkpoint defect. The various G₂ checkpoints, including chromatin deacetylation, DNA damage, and decatenation, may or may not involve p38 MAP kinase, but they are distinguished from one another by other molecular components. The antephase checkpoint may overlap with characterised checkpoints via p38 or may represent the p38-dependent aspect of each of the characterised checkpoints. Further studies are needed to address these issues.

THE DECATENATION CHECKPOINT AND CANCER

Chromosome aberrations – aneuploidy, heteroploidy, and rearrangements – have been documented in nearly all tumour types and actively contribute to carcinogenesis (Sen, 2000), and such aberrations could arise via an inefficient decatenation checkpoint. The products of two tumour suppressor genes, BRCA1 and WRN, have roles in decatenation checkpoint function, and mutations in either gene may increase the likelihood of cancer in part because of the checkpoint deficiency. Aneuploidy is a common feature of BRCA1-associated cancers (Chappuis et al, 2000). Checkpoint deficiency that is acquired during carcinogenesis, for example in the lung and bladder cancer cell lines described above, may result in additional genetic changes that contribute to tumour progression (Figure 1C).

The decatenation checkpoint has particular implications for cancer in the context of stem cells and cancer stem cells (CSCs). The CSC hypothesis stipulates that only a small subset of cells in a tumour has the potential to drive tumour growth and progression (Reya et al, 2001). Cancer stem cells have been isolated from leukaemias and solid tumours and share many properties with normal stem cells. Cancer stem cells could theoretically arise in many ways, one of which is the transformation of a normal stem cell. The inherent decatenation checkpoint deficiency in normal stem and progenitor cells may constitute the basis for transformation and the earliest stages of carcinogenesis (Figure 1C). In addition, it seems likely that CSCs, like their normal stem cell counterparts, have a deficiency in the decatenation checkpoint, and that this deficiency could lead to additional genetic changes and increased tumour malignancy.

One potential manifestation of the relationship between the decatenation checkpoint, stem cells, and cancer is the syndrome known as constitutional trisomy mosaicism (CTM). In patients with CTM, a specific trisomy (e.g. trisomy 8) is found in a subset of cells and a range of cell types, and the trisomy is projected back to a mitotic error in a stem or progenitor cell. The CTM phenotype varies broadly and presumably depends on the nature of the particular stem or progenitor cell in which the trisomy originally appeared. Patients with CTM have a predisposition to cancer, notably haematological malignancy (Brady et al, 2000). One model to explain these observations is that the trisomy in the stem or progenitor cell arises from the decatenation checkpoint deficiency in those cells. The imbalance could arise from any of a range of deficiencies or spontaneous errors, but it is appealing to consider the decatenation checkpoint because of its deficiency in wild-type stem and progenitor cells.

The checkpoint deficiency in stem and progenitor cells also reflects the potential for increased genetic instability in those cells during ex vivo expansion, for example for stem cell therapy (Damelin and Bestor, 2006). During expansion, stem cells are forced to undergo many more rounds of cell division than they normally do in vivo, and the nonphysiological expansion may amplify inherent susceptibilities. Recurrent chromosome imbalances have been documented in human and mouse embryonic stem cells during laboratory culture (reviewed in Damelin and Bestor, 2006). The introduction into a patient of a stem cell that has acquired a genetic change could increase the patient's risk of cancer. Sources of genetic instability in stem cells during ex vivo expansion must be understood in order to minimise the risks involved (Kaufmann, 2006).

The decatenation checkpoint deficiency in lung and bladder cancer cell lines and in stem and progenitor cells suggests that factors that mediate the checkpoint could be useful targets for chemotherapy. The clinical potential was highlighted by the provocative finding that two lung cancer cell lines with a deficient decatenation checkpoint exhibited increased sensitivity to ICRF-193 (Nakagawa et al, 2004). Topoisomerase II poisons are commonly used to treat certain cancers, but these inhibitors target all dividing cells and are highly toxic. In contrast, bisdioxopiperazines and other compounds that target the decatenation checkpoint (Haggarty et al, 2003) may selectively target cancer cells in some tumours. Risk–benefit analysis will be necessary, as one potential side effect of targeting the decatenation checkpoint could be the stimulation of chromosome imbalances in otherwise normal stem and progenitor cells.