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. 1975 Dec;124(3):1395–1402. doi: 10.1128/jb.124.3.1395-1402.1975

Deoxyribonucleic acid modification by intermediate-type modification mutants of Escherichia coli K-12 and B.

J Bulkacz, D Roulland-Dussoix, H W Boyer
PMCID: PMC236052  PMID: 1104586

Abstract

The modification of bacteriophages grown on r-m+/- restriction and modification mutants of Escherichia coli K-12 or B appears to be related to the number of restriction-specific sites in the viral genome. Bacteriophage fd and its mutant U1 fd, which carry two and one B-specific sites, respectively, are not modified in vivo by rB-mB+/- mutant strains. In vitro treatment of fd RF-B+/- deoxyribonucleic acid (DNA) or U1 fd RF-B+/- DNA by endo R-Eco B results in cleavage of the substrate DNA. Lambda bacteriophage, after growth in r-m+/- mutant host strains (lambda-K+/- or lambda-B+/-), is partially protected from in vivo degradation by wild-type homospecific strains. Its efficiency of plating on these strains is approximately 10(-2). However, a hybrid phi80-lambda phage which carries only one K-specific site (sklambda-1) is not modified by rK-mK+/- strains. Labeled DNAs from lambda-B+/- and lambda-K+/- phages were used as substrates for endo R-Eco B and endo R-Eco K nucleases. Zonal centrifugation analysis of the products of the reactions indicate that rK-mK+/- mutants do not protect lambda DNA from in vitro degradation by endo R-Eco K. In contrast, rB-mB+/- mutants appear to partially protect lambda DNA from attack by endo R-Eco B.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Arber W. DNA modification and restriction. Prog Nucleic Acid Res Mol Biol. 1974;14(0):1–37. doi: 10.1016/s0079-6603(08)60204-4. [DOI] [PubMed] [Google Scholar]
  2. Arber W. Host specificity of DNA produced by Escherichia coli. 9. Host-controlled modification of bacteriophage fd. J Mol Biol. 1966 Oct;20(3):483–496. doi: 10.1016/0022-2836(66)90004-0. [DOI] [PubMed] [Google Scholar]
  3. Arber W., Linn S. DNA modification and restriction. Annu Rev Biochem. 1969;38:467–500. doi: 10.1146/annurev.bi.38.070169.002343. [DOI] [PubMed] [Google Scholar]
  4. BURGI E., HERSHEY A. D. Sedimentation rate as a measure of molecular weight of DNA. Biophys J. 1963 Jul;3:309–321. doi: 10.1016/s0006-3495(63)86823-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Boyer H. W. DNA restriction and modification mechanisms in bacteria. Annu Rev Microbiol. 1971;25:153–176. doi: 10.1146/annurev.mi.25.100171.001101. [DOI] [PubMed] [Google Scholar]
  6. Boyer H. W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol. 1969 May 14;41(3):459–472. doi: 10.1016/0022-2836(69)90288-5. [DOI] [PubMed] [Google Scholar]
  7. Boyer H., Scibienski E., Slocum H., Roulland-Dussoix D. The in vitro restriction of the replicative form of W.T. and mutant fd phage DNA. Virology. 1971 Dec;46(3):703–710. doi: 10.1016/0042-6822(71)90072-9. [DOI] [PubMed] [Google Scholar]
  8. Colson A. M., Colson C., Van Pel A. Host-controlled restriction mutants of Salmonella typhimurium. J Gen Microbiol. 1969 Sep;58(1):57–64. doi: 10.1099/00221287-58-1-57. [DOI] [PubMed] [Google Scholar]
  9. Goldberg A. R., Howe M. New mutations in the S cistron of bacteriophage lambda affecting host cell lysis. Virology. 1969 May;38(1):200–202. doi: 10.1016/0042-6822(69)90148-2. [DOI] [PubMed] [Google Scholar]
  10. Horiuchi K., Zinder N. D. Cleavage of bacteriophage fl DNA by the restriction enzyme of Escherichia coli B. Proc Natl Acad Sci U S A. 1972 Nov;69(11):3220–3224. doi: 10.1073/pnas.69.11.3220. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Hubacek J., Glover S. W. Complementation analysis of temperature-sensitive host specificity mutations in Escherichia coli. J Mol Biol. 1970 May 28;50(1):111–127. doi: 10.1016/0022-2836(70)90108-7. [DOI] [PubMed] [Google Scholar]
  12. Kühnlein U., Arber W. Host specificity of DNA produced by Escherichia coli. XV. The role of nucleotide methylation in in vitro B-specific modification. J Mol Biol. 1972 Jan 14;63(1):9–19. doi: 10.1016/0022-2836(72)90518-9. [DOI] [PubMed] [Google Scholar]
  13. Lautenberger J. A., Linn S. The deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. I. Purification, subunit structure, and catalytic properties of the modification methylase. J Biol Chem. 1972 Oct 10;247(19):6176–6182. [PubMed] [Google Scholar]
  14. Linn S., Arber W. Host specificity of DNA produced by Escherichia coli, X. In vitro restriction of phage fd replicative form. Proc Natl Acad Sci U S A. 1968 Apr;59(4):1300–1306. doi: 10.1073/pnas.59.4.1300. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Linn S., Lautenberger J. A., Eskin B., Lackey D. Host-controlled restriction and modification enzymes of Escherichia coli B. Fed Proc. 1974 May;33(5):1128–1134. [PubMed] [Google Scholar]
  16. Murray N. E., Batten P. L., Murray K. Restriction of bacteriophage lambda by Escherichia coli K. J Mol Biol. 1973 Dec 15;81(3):395–407. doi: 10.1016/0022-2836(73)90149-6. [DOI] [PubMed] [Google Scholar]
  17. Piekarowicz A., Glover S. W. Host specificity of DNA in Haemophilus influenzae: the two restriction and modification systems in strain Ra. Mol Gen Genet. 1972;116(1):11–25. doi: 10.1007/BF00334255. [DOI] [PubMed] [Google Scholar]
  18. Piekarowicz A., Kauc L., Glover S. W. Host specificity of DNA in Haemophilus influenzae: the restriction and modification systems in strains Rb and Rf. J Gen Microbiol. 1974 Apr;81(2):391–403. doi: 10.1099/00221287-81-2-391. [DOI] [PubMed] [Google Scholar]
  19. Roulland-Dussoix D., Boyer H. W. The Escherichia coli B restriction endonuclease. Biochim Biophys Acta. 1969 Nov 19;195(1):219–229. doi: 10.1016/0005-2787(69)90618-2. [DOI] [PubMed] [Google Scholar]
  20. Schlagman S., Hattman S. Mutants of the N-3 R-factor conditionally defective in hspII modification and deoxyribonucleic acid-cytosine methylase activity. J Bacteriol. 1974 Oct;120(1):234–239. doi: 10.1128/jb.120.1.234-239.1974. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Smith H. O., Nathans D. Letter: A suggested nomenclature for bacterial host modification and restriction systems and their enzymes. J Mol Biol. 1973 Dec 15;81(3):419–423. doi: 10.1016/0022-2836(73)90152-6. [DOI] [PubMed] [Google Scholar]
  22. Wood W. B. Host specificity of DNA produced by Escherichia coli: bacterial mutations affecting the restriction and modification of DNA. J Mol Biol. 1966 Mar;16(1):118–133. doi: 10.1016/s0022-2836(66)80267-x. [DOI] [PubMed] [Google Scholar]

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