Table 3.

Named genes induced in 48-h TNF-α-treated chromaffin cells vs. control based on SSH analysis

Gene	Ratio	Accession no.	Gene ID
Signal transduction
Nuclear factor of κ-light polypeptide gene enhancer in B-cells inhibitor, α	2.47 ± 0.51	NM_020529	4792
Calcium modulating ligand	1.83 ± 0.62	NM_001745	819
Mitogen-inducible gene 6	1.81 ± 0.38	NM_018948	54206
Stathmin-like 2	1.72 ± 0.26	AK092187	11075
Butyrate-induced transcript 1	1.52 ± 0.29	BC058912	51495
Transforming growth factor β receptor I	1.51 ± 0.17	BC071181	7046
Intercellular signaling
Vasoactive intestinal polypeptide	2.23 ± 0.28	NM_173970	280956
Proenkephalin	1.88 ± 0.65	NM_174141	281387
Neuronal pentraxin	1.69 ± 0.16	NM_002522	4884
Traffic/secretion
Secretogranin II (Chromogranin C)	2.02 ± 0.75	NM_174176	281477
Sec61 γ subunit	1.57 ± 0.28	BC051840	23480
Spastic paraplegia 3A (autosomal dominant)	1.56 ± 0.21	NM_181598	51062
Metabolism
Similar to cytochrome P450 CYP3A24	2.40 ± 0.66	XM_595414	517246
Ubiquitin specific peptidase 12	1.65 ± 0.19	AF022789	219333
Phosphatidylinositol glycan, class S	1.60 ± 0.15	BC001319	94005
Ferritin, heavy polypeptide 1	1.60 ± 0.41	AF540563	281173
Cellular adhesion/angiogenesis
Thrombospondin 1	1.69 ± 0.39	NM_003246	7057
Morphogenesis
Decorin	1.61 ± 0.57	NM_173906	280760
Cell death
Tumor protein, translationally-controled 1	1.57 ± 0.24	BC052333	7178
Unknown function
VGF nerve growth factor inducible	2.02 ± 0.37	NM_003378	7425
Selenoprotein K	1.87 ± 0.22	BC013162	58515
Ribosomal protein L36a pseudogene	1.59 ± 0.47	NG_001571	207032
LUC7-like 2	1.53 ± 0.23	BC050708	51631

The GenBank accession no. and the Gene cluster (GeneID) for each gene are indicated. The ratios ± sem were determined from four different experiments.