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. 2002 Apr;3(2):115–118. doi: 10.1002/cfg.145

The Informatics for Making Sense of the Genome: A Progress Report From the BioPathways Consortium

Eric K Neumann 1, Vincent Schachter 2,✉
PMCID: PMC2447249  PMID: 18628889

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Ideker T., Thorsson V., Ranish J. A., Christmas R., Buhler J., Eng J. K., Bumgarner R., Goodlett D. R., Aebersold R., Hood L. Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science. 2001 May 4;292(5518):929–934. doi: 10.1126/science.292.5518.929. [DOI] [PubMed] [Google Scholar]
  2. Jamshidi N., Edwards J. S., Fahland T., Church G. M., Palsson B. O. Dynamic simulation of the human red blood cell metabolic network. Bioinformatics. 2001 Mar;17(3):286–287. doi: 10.1093/bioinformatics/17.3.286. [DOI] [PubMed] [Google Scholar]
  3. Karp P. D. Pathway databases: a case study in computational symbolic theories. Science. 2001 Sep 14;293(5537):2040–2044. doi: 10.1126/science.1064621. [DOI] [PubMed] [Google Scholar]
  4. Legrain P., Jestin J. L., Schächter V. From the analysis of protein complexes to proteome-wide linkage maps. Curr Opin Biotechnol. 2000 Aug;11(4):402–407. doi: 10.1016/s0958-1669(00)00117-8. [DOI] [PubMed] [Google Scholar]
  5. Rain J. C., Selig L., De Reuse H., Battaglia V., Reverdy C., Simon S., Lenzen G., Petel F., Wojcik J., Schächter V. The protein-protein interaction map of Helicobacter pylori. Nature. 2001 Jan 11;409(6817):211–215. doi: 10.1038/35051615. [DOI] [PubMed] [Google Scholar]
  6. Roberts C. J., Nelson B., Marton M. J., Stoughton R., Meyer M. R., Bennett H. A., He Y. D., Dai H., Walker W. L., Hughes T. R. Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles. Science. 2000 Feb 4;287(5454):873–880. doi: 10.1126/science.287.5454.873. [DOI] [PubMed] [Google Scholar]
  7. Uetz P., Giot L., Cagney G., Mansfield T. A., Judson R. S., Knight J. R., Lockshon D., Narayan V., Srinivasan M., Pochart P. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature. 2000 Feb 10;403(6770):623–627. doi: 10.1038/35001009. [DOI] [PubMed] [Google Scholar]

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