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. 2005 Apr;6(3):174–180. doi: 10.1002/cfg.467

Bovine Genomics From Academia to Industry

David Henderson 1,✉, Milt Thomas 2, Yang Da 3
PMCID: PMC2447526  PMID: 18629229

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Ashwell M. S., Heyen D. W., Sonstegard T. S., Van Tassell C. P., Da Y., VanRaden P. M., Ron M., Weller J. I., Lewin H. A. Detection of quantitative trait loci affecting milk production, health, and reproductive traits in Holstein cattle. J Dairy Sci. 2004 Feb;87(2):468–475. doi: 10.3168/jds.S0022-0302(04)73186-0. [DOI] [PubMed] [Google Scholar]
  2. Casas E., White S. N., Riley D. G., Smith T. P. L., Brenneman R. A., Olson T. A., Johnson D. D., Coleman S. W., Bennett G. L., Chase C. C., Jr Assessment of single nucleotide polymorphisms in genes residing on chromosomes 14 and 29 for association with carcass composition traits in Bos indicus cattle. J Anim Sci. 2005 Jan;83(1):13–19. doi: 10.2527/2005.83113x. [DOI] [PubMed] [Google Scholar]
  3. Cowan C. M., Dentine M. R., Coyle T. Chromosome substitution effects associated with kappa-casein and beta-lactoglobulin in Holstein cattle. J Dairy Sci. 1992 Apr;75(4):1097–1104. doi: 10.3168/jds.S0022-0302(92)77854-0. [DOI] [PubMed] [Google Scholar]
  4. Grosz M. D., MacNeil M. D. Putative quantitative trait locus affecting birth weight on bovine chromosome 2. J Anim Sci. 2001 Jan;79(1):68–72. doi: 10.2527/2001.79168x. [DOI] [PubMed] [Google Scholar]
  5. Heaton Michael P., Harhay Gregory P., Bennett Gary L., Stone Roger T., Grosse W. Michael, Casas Eduardo, Keele John W., Smith Timothy P. L., Chitko-McKown Carol G., Laegreid William W. Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle. Mamm Genome. 2002 May;13(5):272–281. doi: 10.1007/s00335-001-2146-3. [DOI] [PubMed] [Google Scholar]
  6. Hedges Jodi F., Cockrell Diane, Jackiw Larissa, Meissner Nicole, Jutila Mark A. Differential mRNA expression in circulating gammadelta T lymphocyte subsets defines unique tissue-specific functions. J Leukoc Biol. 2003 Feb;73(2):306–314. doi: 10.1189/jlb.0902453. [DOI] [PubMed] [Google Scholar]
  7. Hedges Jodi F., Graff Jill C., Jutila Mark A. Transcriptional profiling of gamma delta T cells. J Immunol. 2003 Nov 15;171(10):4959–4964. doi: 10.4049/jimmunol.171.10.4959. [DOI] [PubMed] [Google Scholar]
  8. Kennedy B. W., van der Werf J. H., Meuwissen T. H. Genetic and statistical properties of residual feed intake. J Anim Sci. 1993 Dec;71(12):3239–3250. doi: 10.2527/1993.71123239x. [DOI] [PubMed] [Google Scholar]
  9. Kim J. J., Farnir F., Savell J., Taylor J. F. Detection of quantitative trait loci for growth and beef carcass fatness traits in a cross between Bos taurus (Angus) and Bos indicus (Brahman) cattle. J Anim Sci. 2003 Aug;81(8):1933–1942. doi: 10.2527/2003.8181933x. [DOI] [PubMed] [Google Scholar]
  10. Li C., Basarab J., Snelling W. M., Benkel B., Kneeland J., Murdoch B., Hansen C., Moore S. S. Identification and fine mapping of quantitative trait loci for backfat on bovine chromosomes 2, 5, 6, 19, 21, and 23 in a commercial line of Bos taurus. J Anim Sci. 2004 Apr;82(4):967–972. doi: 10.2527/2004.824967x. [DOI] [PubMed] [Google Scholar]
  11. MacNeil M. D., Dearborn D. D., Cundiff L. V., Dinkel C. A., Gregory K. E. Effects of inbreeding and heterosis in Hereford females on fertility, calf survival and preweaning growth. J Anim Sci. 1989 Apr;67(4):895–901. doi: 10.2527/jas1989.674895x. [DOI] [PubMed] [Google Scholar]
  12. MacNeil M. D., Urick J. J., Newman S., Knapp B. W. Selection for postweaning growth in inbred Hereford cattle: the Fort Keogh, Montana line 1 example. J Anim Sci. 1992 Mar;70(3):723–733. doi: 10.2527/1992.703723x. [DOI] [PubMed] [Google Scholar]
  13. Meissner Nicole, Radke Jay, Hedges Jodi F., White Michael, Behnke Michael, Bertolino Shannon, Abrahamsen Mitchell, Jutila Mark A. Serial analysis of gene expression in circulating gamma delta T cell subsets defines distinct immunoregulatory phenotypes and unexpected gene expression profiles. J Immunol. 2003 Jan 1;170(1):356–364. doi: 10.4049/jimmunol.170.1.356. [DOI] [PubMed] [Google Scholar]
  14. Moore S. S., Li C., Basarab J., Snelling W. M., Kneeland J., Murdoch B., Hansen C., Benkel B. Fine mapping of quantitative trait loci and assessment of positional candidate genes for backfat on bovine chromosome 14 in a commercial line of Bos taurus. J Anim Sci. 2003 Aug;81(8):1919–1925. doi: 10.2527/2003.8181919x. [DOI] [PubMed] [Google Scholar]
  15. Nkrumah J. D., Li C., Yu J., Hansen C., Keisler D. H., Moore S. S. Polymorphisms in the bovine leptin promoter associated with serum leptin concentration, growth, feed intake, feeding behavior, and measures of carcass merit. J Anim Sci. 2005 Jan;83(1):20–28. doi: 10.2527/2005.83120x. [DOI] [PubMed] [Google Scholar]
  16. Page B. T., Casas E., Heaton M. P., Cullen N. G., Hyndman D. L., Morris C. A., Crawford A. M., Wheeler T. L., Koohmaraie M., Keele J. W. Evaluation of single-nucleotide polymorphisms in CAPN1 for association with meat tenderness in cattle. J Anim Sci. 2002 Dec;80(12):3077–3085. doi: 10.2527/2002.80123077x. [DOI] [PubMed] [Google Scholar]
  17. Page B. T., Casas E., Quaas R. L., Thallman R. M., Wheeler T. L., Shackelford S. D., Koohmaraie M., White S. N., Bennett G. L., Keele J. W. Association of markers in the bovine CAPN1 gene with meat tenderness in large crossbred populations that sample influential industry sires. J Anim Sci. 2004 Dec;82(12):3474–3481. doi: 10.2527/2004.82123474x. [DOI] [PubMed] [Google Scholar]
  18. Pariacote F., Van Vleck L. D., MacNeil M. D. Effects of inbreeding and heterozygosity on preweaning traits in a closed population of Herefords under selection. J Anim Sci. 1998 May;76(5):1303–1310. doi: 10.2527/1998.7651303x. [DOI] [PubMed] [Google Scholar]
  19. Thallman R. M., Bennett G. L., Keele J. W., Kappes S. M. Efficient computation of genotype probabilities for loci with many alleles: I. Allelic peeling. J Anim Sci. 2001 Jan;79(1):26–33. doi: 10.2527/2001.79126x. [DOI] [PubMed] [Google Scholar]
  20. Thallman R. M., Bennett G. L., Keele J. W., Kappes S. M. Efficient computation of genotype probabilities for loci with many alleles: II. Iterative method for large, complex pedigrees. J Anim Sci. 2001 Jan;79(1):34–44. doi: 10.2527/2001.79134x. [DOI] [PubMed] [Google Scholar]
  21. Venter J. C., Adams M. D., Myers E. W., Li P. W., Mural R. J., Sutton G. G., Smith H. O., Yandell M., Evans C. A., Holt R. A. The sequence of the human genome. Science. 2001 Feb 16;291(5507):1304–1351. doi: 10.1126/science.1058040. [DOI] [PubMed] [Google Scholar]

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