Abstract
Recent landmark molecular genetic studies have identified an evolutionarily conserved insulin/IGF-1 signal transduction pathway that regulates lifespan. In C. elegans, Drosophila, and rodents, attenuated insulin/IGF-1 signaling appears to regulate lifespan and enhance resistance to environmental stress. The Ames (Prop1df/df) and Snell (Pit1dw/dw) hypopituitary dwarf mice with growth hormone (GH), thyroid-stimulating hormone (TSH), and prolactin deficiencies live 40–60% longer than control mice. Both mutants are resistant to multiple forms of environmental stress in vitro. Taken collectively, these genetic models indicate that diminished insulin/IGF-l signaling may play a central role in the determination of mammalian lifespan by conferring resistance to exogenous and endogenous stressors. These pleiotropic endocrine pathways control diverse programs of gene expression that appear to orchestrate the development of a biological phenotype that promotes longevity. With the ability to investigate thousands of genes simultaneously, several microarray surveys have identified potential longevity assurance genes and provided information on the mechanism(s) by which the dwarf genotypes (dw/dw) and (df/df), and caloric restriction may lead to longevity. We propose that a comparison of specific changes in gene expression shared between Snell and Ames dwarf mice may provide a deeper understanding of the transcriptional mechanisms of longevity determination. Furthermore, we propose that a comparison of the physiological consequences of the Pit1dw and Prop1df mutations may reveal transcriptional profiles similar to those reported for the C. elegans and Drosophila mutants. In this study we have identified classes of genes whose expression is similarly affected in both Snell and Ames dwarf mice. Our comparative microarray data suggest that specific detoxification enzymes of the P450 (CYP) family as well as oxidative and steroid metabolism may play a key role in longevity assurance of the Snell and Ames dwarf mouse mutants. We propose that the altered expression of these genes defines a biochemical phenotype which may promote longevity in Snell and Ames dwarf mice.
Key words: Aging, Ames Dwarf, Detoxification, Metabolism, P450, PPAR, ROS, Snell Dwarf, Steriod
References
- Abbaszade IG, Clarke TR, Park CH, Payne AH (1995) The mouse 3 beta-hydroxysteroid dehydrogenase multigene family includes two functionally distinct groups of proteins. Mol Endocrinol 9:1214–1222 [DOI] [PubMed]
- Abdel-Razzak Z, Corcos L, Fantrel A, Guillouzo A (1995) Interleukin-1 beta antagonizes phenobarbital induction of several major cytochromes P450 in adult rat hepatocytes in primary culture. FEBS Lett 366:159–164 [DOI] [PubMed]
- Amador-Noguez D, Zimmerman J, Venable S, Darlington G (2005) Gender-specific alterations in gene expression and loss of liver sexual dimorphism in the long-lived Ames dwarf mice. Biochem Biophys Res Commun 332:1086–2000 [DOI] [PubMed]
- Anderson SP, Yoon L, Richard EB, Dunn CS, Cattley RC, Corton JC (2002) Delayed liver regeneration in peroxisomes proliferators-activated receptor-alpha-null mice. Hepatology 36:544–554 [DOI] [PubMed]
- Bartke A (2005) Minireview: role of the growth hormone/insulin-like growth factor system in mammalian aging. Endocrinology 146:3718–3723 [DOI] [PubMed]
- Bartke A, Brown-Borg HM (2004) Life span extension in the dwarf mouse. Curr Top Dev Biol 63:189–225 [DOI] [PubMed]
- Berchtold JP (1977) Ultracytochemical demonstration and probable localization of 3β-hydroxysteroid dehydrogenase activity with a ferricyanide technique. Histochemistry 50:175–190 [DOI] [PubMed]
- Bluher M, Kahn BB, Kahn CR (2003) Extended longevity in mice lacking the insulin receptor in adipose tissue. Science 299:572–574 [DOI] [PubMed]
- Boylston WH, Gerstner A, DeFord JH, Madsen M, Flurkey K, Harrison DE, Papaconstantinou J (2004) Altered cholesterologenic and lipogenic transcriptional profile in livers of aging Snell dwarf (Pit1dw/dwJ) mice. Aging Cell 3:283–296 [DOI] [PubMed]
- Brown-Borg HM (2003) Hormonal regulation of aging and lifespan. Trends Endocrinol Metab 14:151–153 [DOI] [PubMed]
- Brown-Borg HM, Borg KE, Meliska CJ, Bartke A (1996) Dwarf mice and the aging process. Nature 384:33 [DOI] [PubMed]
- Cashman JR (1995) Structural and catalytic properties of the mammalian flavin-containing monooxygenases. Chem Res Toxicol 8:166–181 [DOI] [PubMed]
- Cashman JR (2005) Quantitative analysis of FMO gene mRNA levels in human tissue. Drug Metab Dispos, doi: 10.1124/dmd.105.006171, DMD #6171 [DOI] [PubMed]
- Chapman JC, Sauer LA (1979) Intracellular localization and properties of 3 beta-hydroxysteroid dehydrogenase/isomerase in the adrenal cortex. J Biol Chem 254:6624–6630 [PubMed]
- Cherradi N, Chambaz EM, Defaye G (1995) Organization of 3β-hydroxysteroid dehydrogenase/Δ5-Δ4 isomerase and cytochrome P450 scc into a catalytically active molecular complex in bovine adrenocortical mitochondria. J Steroid Biochem Mol Biol 55:507–514 [DOI] [PubMed]
- Cherrington NJ, Cao Y, Cherrington JW, Rose RL, Hodgson E (1998) Physiological factors affecting protein expression of flavin-containing monooxygenases 1, 3 and 5. Xenobiotica 28:673–682 [DOI] [PubMed]
- Clancy DJ, Gems D, Harshman LG, Oldham S, Stocker H, Hafen E, Leevers SJ, Partridge L (2001) Extension of lifespan by loss of CHICO, a Drosophila insulin receptor substrate protein. Science 292:41–43 [DOI] [PubMed]
- Coecke S, Callaerts A, Phillips IR, Vercruysse A, Shephard EA, Rogiers V (1998a) Effect of thyroid hormones on flavin-containing monooxygenase activity in co-cultured adult rat hepatocytes. Toxicol In Vitro 12:335–341 [DOI] [PubMed]
- Coecke S, Debast G, Philips IR, Vercurysse A, Shepard EA, Rogiers V (1998b) Hormonal regulation of microsomal flavin-containing monooxygenase activity by sex steroids and growth hormone in co-cultured adult male rat hepatocytes. Biochem Pharmacol 56:1047–1051 [DOI] [PubMed]
- Corton JC, Anderson SP, Stauber A (2000) Central role of peroxisome proliferators—activated receptors in the actions of peroxisome proliferators. Annu Rev Pharmacol Toxicol 40:491–518 [DOI] [PubMed]
- Corton JC, Apte U, Anderson SP, Limaye P, Yoon L, Latendresse J, Dunn C, Everitt JI, Voss KA, Swanson C, Kimbrough C, Wong JS, Gill SS, Chandraratna AR, Kwak MK, Kensler TW, Stulnig TM, Steffensen KR, Gustafsson JA, Mehendale HM (2004) Mimetics of caloric restriction include agonists of lipid-activated nuclear receptors. J Biol Chem 279:46204–46212 [DOI] [PubMed]
- Coshigano KT, Clemmons D, Bellush LL, Kopchick JJ (2000) Assessment of growth parameters and lifespan of GHR/BP gene-disrupted mice. Endocrinology 141:2608–2613 [DOI] [PubMed]
- Couet J, Simard, J, Martel C, Trudel C, Labrie Y, Labrie F (1992) Regulation of 3-ketosteroid reductase messenger ribonucleic acid levels and 3 beta-hydroxysteroid dehydrogenase/delta 5-delta 4-isomerase activity in rat liver by sex steroids and pituitary hormones. Endocrinology 131:3034–3044 [DOI] [PubMed]
- Damon M, Fautrel A, Guillouzo A, Corcos L (1996) Genetic analysis of the phenobarbital regulations of the cytochrome P450 2b-9 and aldehyde dehydrogenase type 2 mRNAs in mouse liver. Biochem J 317:481–486 [DOI] [PMC free article] [PubMed]
- Dhahbi JM, Kim HJ, Mote PL, Beaver RJ, Spindler SR (2004) Temporal linkage between the phenotypic and genomic responses to caloric restriction. Proc Natl Acad Sci USA 101:5524–5529 [DOI] [PMC free article] [PubMed]
- Dhahbi JM, Mote PL, Fahy GM, Spindler SR (2005) Identification of potential caloric restriction mimetics by microarray. Physiol Genomics 23:343–350 [DOI] [PubMed]
- Dominici FP, Hauck S, Argentino DP, Bartke A, Turyn D (2002) Increased insulin sensitivity and up regulation of insulin receptor, insulin receptor substrate (IRS)-1 and IRS-2 in liver of Ames dwarf mice. J Endocrinol 173:81–94 [DOI] [PubMed]
- Doniger SW, Salomonis N, Dahlquist KD, Vranizan K, Lawlor SC, Conklin BR (2003) MAPPFinder: using gene ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol 4:R7 [DOI] [PMC free article] [PubMed]
- Dozmorov I, Bartke A, Miller RA (2001) Array-based expression analysis of mouse liver genes: effect of age and of the longevity mutant Prop1df. J Gerontol A Biol Sci Med Sci 56:B72–B80 [DOI] [PubMed]
- Dozmorov I, Galecki A, Chang Y, Krzesiecki R, Vergara M, Miller RA (2002) Gene expression profile of long-lived Snell dwarf mice. J Gerontol A Biol Sci Med Sci 57:B99–B108 [DOI] [PubMed]
- Dulos J, Kaptein A, Kavelaars A, Heijnen C, Boots A (2005a) Tumour necrosis factor-alpha stimulates dehydroepiandrosterone metabolism in human fibroblast-like synoviocytes: a role for nuclear factor-kappaB and activator protein-1 in the regulation of expression of cytochrome p450 enzyme 7b. Arthritis Res Ther 7:R1271–R1280 [DOI] [PMC free article] [PubMed]
- Dulos J, van der Vleuten MA, Kavelaars A, Heijnen CJ, Boots AM (2005b) CYP7B expression and activity in fibroblast-like synoviocytes from patients with rheumatoid arthritis: regulation by proinflammatory cytokines. Arthritis Rheum 52:770–778 [DOI] [PubMed]
- Echchgadda I, Song CS, Oh TS, Cho SH, Rivera OJ, Chatterjee B (2004) Gene regulation for the senescence marker DHEA-sulfotransferase (SULT2A) by the xenobiotic activated pregnane X receptor (PXR). Mech Ageing Dev 125:733–745 [DOI] [PubMed]
- Falls JG, Ryu DY, Cao Y, Levi PE, Hodgson E (1997) Regulation of mouse liver flavin-containing monooxygenases 1 and 3 by sex steroids. Arch Biochem Biophys 342:212–223 [DOI] [PubMed]
- Flurkey K, Papaconstantinou J, Miller RA, Harrison DE (2001) Lifespan extension and delayed immune and collagen aging in mutant mice with defects in growth hormone production. Proc Natl Acad Sci USA 98:6736–6741 [DOI] [PMC free article] [PubMed]
- Flurkey K, Papaconstantinou J, Harrison DE (2002) The Snell dwarf mutation Pitdw can increase lifespan in mice. Mech Ageing Dev 123:121–130 [DOI] [PubMed]
- Fraaije MW, Mattevi A (2000) Flavoenzymes: diverse catalysts with recurrent features. Trends Biochem Sci 25:126–132 [DOI] [PubMed]
- Francis GA, Fayard E, Picard F, Auwerx J (2003) Nuclear receptors and control of metabolism. Annu Rev Physiol 65:261–311 [DOI] [PubMed]
- Galisteo MN, Lagadic-Gossmann D, Fautrel A, Joannard F, Guillouzo A, Corcos L (2000) Regulation of phenobarbital induction of the cytochrome P450 2b9/10 genes in primary mouse hepatocyte culture. Involvement of calcium and cAMP-dependent pathways. Eur J Biochem 267:963–970 [DOI] [PubMed]
- Gems D, McElwee JJ (2005) Broad spectrum detoxification: the major longevity assurance process regulated by insulin/IGF-1 signaling. Mech Ageing Dev 126: 381–387 [DOI] [PubMed]
- Gems D, Pletcher S, Partridge L (2002) Interpreting interactions between treatments that slow aging. Aging Cell 1:1–9 [DOI] [PubMed]
- Gentleman R, Carey V (2005) Biobase: base functions for Bioconductor. R package version 1.5.12
- Guarente L, Kenyon C (2000) Genetic pathways that regulate ageing in model organisms. Nature 408:255–262 [DOI] [PubMed]
- Hekimi S, Guarente L (2003) Genetics and the specificity of the aging process. Science 299:1351–1354 [DOI] [PubMed]
- Henerson MC, Krueger SK, Siddens LK, Stevens JF, Williams DE (2004) S-oxygenation of the thioether organophosphate insecticides phorate and disulfoton by human lung flavin-containing monooxygenase 2. Biochem Pharmacol 68:959–967 [DOI] [PubMed]
- Heng YM, Kuo C-WS, Jones PS, Savory R, Schulz RM, Tomlinson SR, Gray TJB, Bell DR (1997) A novel murine P-450 gene Cyp4a14, is part of a cluster of Cyp4a and Cyp4b, but not of CYP4F genes in mouse and humans. Biochem J 325:741–749 [DOI] [PMC free article] [PubMed]
- Herrmann M, Scholmerich J, Straub RH (2002) Influence of cytokines and growth factors on distinct steroidogenic enzymes in vitro. Ann N Y Acad Sci 966:166–186 [DOI] [PubMed]
- Holzenberger M (2004) The GH/IGF-1 axis and longevity. Eur J Endocrinol 151 [Suppl 1]:S23–S27 [DOI] [PubMed]
- Holzenberger M, Dupon J, Ducos B, Leneuve P, Gelden A, Even PC, Cerfvera P, Le Bouc Y (2003) IGF-1 receptor regulates lifespan and resistance to oxidative stress in mice. Nature 421:182–186 [DOI] [PubMed]
- Hsieh C-C, DeFord JH, Flurkey K, Harrison DE, Papaconstantinou J (2002a) Implications of the insulin signaling pathway in Snell dwarf mouse longevity: a similarity with C. elegans longevity paradigm. Mech Age Dev 123:1229–1244 [DOI] [PubMed]
- Hsieh C-C, DeFord JH, Flurkey K, Harrison DE, Papaconstantinou J (2002b) Effects of the Pit1 mutation on the insulin signaling pathway: implications on the longevity of the long-lived Snell dwarf mouse. Mech Age Dev 123:1245–1255 [DOI] [PubMed]
- Irizarry RA, Gautier L, Bolstad BM, Miller C, with contributions from Astrand M, Cope LM, Gentleman R, Gentry H, Huber W, MacDonald J, Rubinstein RIP, Workman C, Zhang J (2005) Affy: methods for Affymetrix oligonucleotide arrays. R package, version 1.6.7
- Janmohamed A, Hernandez D, Phillips IR, Shephard EA (2004) Cell-, tissue-, sex-, and developmental stage-specific expression of mouse flavin-containing monooxygenases (FMOs). Biochem Pharmacol 68:73–83 [DOI] [PubMed]
- Jones FM, Morrell JC, Gould SJ (2000) Identification and characterization of HAOX1, HAOX2, and HAOX3, three human peroxisomal 2-hydroxy acid oxidases. J Biol Chem 275:12590–12597 [DOI] [PubMed]
- Keeney DS, Murry BA, Bartke A, Wagner TE, Mason JI (1993) Growth hormone transgenes regulate the expression of sex-specific isoforms of 3β-hydroxysteroid dehydrogenase/Δ5-Δ4 isomerase in mouse liver and gonads. Endocrinology 133:1131–1138 [DOI] [PubMed]
- Kenyon C (2001) A conserved regulatory system for aging. Cell 105:165–168 [DOI] [PubMed]
- Kenyon C (2005) The plasticity of aging: insights from long-lived mutants. Cell 120:449–460 [DOI] [PubMed]
- Kimura KD, Tissenbaum HG, Liu Y, Ruvkin G (1997) daf-2, an insulin receptor-like gene that regulates longevity and diapause in Caenorhabditis elegans. Science 277:942–946 [DOI] [PubMed]
- Kroetz DL, Yook P, Costet P, Bianchi P, Pineau T (1998) Peroxisome proliferator-activated receptor α controls the hepatic Cyp4A induction adaptive response to starvation and diabetes. J Biol Chem 273:31581–31589 [DOI] [PubMed]
- Krueger SK, Williams DE (2005) Mammalian flavin-containing monooxygenases: structure/function, genetic polymorphisms and role in drug metabolism. Pharmacol Ther 106:357–387 [DOI] [PMC free article] [PubMed]
- Kurosu H, Yamamoto M, Clark JD, Pastor JV, Nandi A, Gurnani P, McGuinness OP, Chikuda H, Yamaguchi M, Kawaguchi H, Shimomura I, Takayama Y, Herz J, Kahn CR, Rosenblatt KP, Kuro-o M (2005) Suppression of aging in mice by the hormone klotho. Science 309:1829–1833 [DOI] [PMC free article] [PubMed]
- Larsen PL (1993) Aging and resistance to oxidative damage in Caenorhabditis elegans. Proc Natl Acad Sci USA 90:8905–8909 [DOI] [PMC free article] [PubMed]
- Latter V, Lachner J, Buronfosse T, Garnier F, Benoit E (2002) Physiological factors affecting the expression of FMO1 and FMO3 in the rat liver and kidney. Biochem Pharmacol 63:1453–1464 [DOI] [PubMed]
- Leclerq IA, Farrell GC, Field J, Bell DR, Gonzalez FJ, Robertson GR (2000) CYP2E1 and CYP4A as microsomal catalysts of lipid peroxides in murine nonalcoholic steatohepatitis. J Clin Invest 105:1067–1075 [DOI] [PMC free article] [PubMed]
- Leone TC, Weinheimer CJ, Kelly DP (1999) A critical role for peroxisome proliferator-activated receptor α (PPARα) in the cellular fasting response: the PPARα-null mouse as a model of fatty acid oxidation disorders. Proc Natl Acad Sci U S A 96:7473–7478 [DOI] [PMC free article] [PubMed]
- Lin YJ, Seroude L, Benzer S (1998) Extended lifespan and stress resistance in the Drosophila mutant Methuselah. Science 282:943–946 [DOI] [PubMed]
- Lindros KO (1997) Zonation of cytochrome P450 expression, drug metabolism and toxicity in the liver. Gen Pharmacol 28:191–196 [DOI] [PubMed]
- Lithgow GJ, Walker GA (2002) Stress resistance as a determinate of C. elegans lifespan. Mech Ageing Dev 123:765–771 [DOI] [PubMed]
- Liu G, Loraine AE, Shigeta R, Cline M, Cheng J, Valmeekam V, Sun S, Kulp D, Siani-Rose MA (2003) NetAffx: Affymetrix probesets and annotations. Nucleic Acids Res 31:82–86 [DOI] [PMC free article] [PubMed]
- Liu JL, Coschigano KT, Robertson K, Lipsett M, Guo Y, Kopchick JJ, Kuma U, Liu YL (2004) Disruption of growth hormone receptor gene causes diminished pancreatic islet size and increased insulin sensitivity in mice. Am J Physiol Endocrinol Metab 287:E405–E413 [DOI] [PubMed]
- Marc N, Galisteo M, Lagadic-Gossmann D, Fautrel A, Joannard F, Guillouzo A, Corcos L (2000) Regulation of phenobarbital induction of the cytochrome P450 2b9/10 genes in primary mouse hepatocyte culture. Involvement of calcium and cAMP-dependent pathways. Eur J Biochem 267:963–970 [DOI] [PubMed]
- Massey V (1994) Activation of molecular oxygen by flavins and flavoproteins. J Biol Chem 269:22459–22462 [PubMed]
- Migliaccio E, Giorgio M, Mele S, Pelicci G, Reboldi P, Pandolfi PP, Lanfrancone L, Pelicci PG (1999) The p66shc adaptor protein controls oxidative stress response and life span in mammals. Nature 402:309–313 [DOI] [PubMed]
- Morfin R (2002) Involvement of steroids and cytochrome P450 species in triggering of immune defenses. J Steroid Biochem Mol Biol 80:273–290 [DOI] [PubMed]
- Murakami S, Johnson TE (1996) A genetic pathway conferring life extension and resistance to UV stress in Caenorhabditis elegans. Genetics 143:1207–1218 [DOI] [PMC free article] [PubMed]
- Murakami S, Salmon A, Miller RA (2003) Multiplex stress resistance in cells from long-lived dwarf mice. FASEB J 17:1565–1566 [DOI] [PubMed]
- Naville D, Keeney DS, Jenkin G, Murry BA, Head JR, Mason JI (1991) Regulation of expression of male-specific rat liver microsomal 3β-hydroxysteroid dehydrogenase. Mol Endocrinol 5:1090–1100 [DOI] [PubMed]
- Nemoto N, Sakurai J (1995) Glucocorticoid and sex hormones as activating or modulating factors for expression of Cyp2b-9 and Cyp2b-10 in mouse liver and hepatocytes. Arch Biochem Biophys 319:286–292 [DOI] [PubMed]
- Payne AH, Abbaszade IG, Clarke TR, Bain PA, Park CH (1997) The multiple murine 3β-hydroxysteroid dehydrogenase isoforms: structure function, and tissue- and developmentally specific expression. Steroids 62:169–175 [DOI] [PubMed]
- Puigserver P, Spiegleman BM (2003) Peroxisome proliferator-activated receptor-gamma coactivator 1 alpha (PGC-1 alpha): transcriptional coactivator and metabolic regulator. Endocr Rev 24:79–90 [DOI] [PubMed]
- Recalcati S, Tacchiani L, Alberghini A, Conte D, Cairo G (2003) Oxidative stress-mediated downregulation of rat hydorxysteroid oxidase 1, a liver-specific peroxisomal enzyme. Hepatology 38:1159–1166 [DOI] [PubMed]
- Rendic S (2002) Summary of information on human CYP enzymes: human P450 metabolism data. Drug Metab Rev 29:83–448 [DOI] [PubMed]
- Richardson A, Liu F, Adamo ML, Van Remmen H, Nelson JF (2004) The role of insulin and insulin-like growth factor-I in mammalian ageing. Best Pract Res Clin Endocrinol Metab 18:393–406 [DOI] [PubMed]
- Romanick MA, Rakoczy SG, Brown-Borg HM (2004) Long-lived Ames dwarf mouse exhibits increased antioxidant defense in skeletal muscle. Mech Ageing Dev 125:269–281 [DOI] [PubMed]
- Salmon AB, Murakami S, Bartke A, Kopchick J, Yasumura K, Miller RA (2005) Fibroblast cell lines from young adult mice of long-lived mutant strains are resistant to multiple forms of stress. Am J Physiol Endocrinol Metab 289:E23–E29 [DOI] [PubMed]
- Sampayo JN, Olsen A, Lithgow GJ (2003) Oxidative stress in Caenorhabditis elegans: protective effects of superoxide dismutase/catalase mimetics. Aging Cell 2:319–326 [DOI] [PubMed]
- Sauer LA, Chapman JC, Dauchy RT (1994) Topology of 3β-hydroxysteroid dehydrogenase/Δ5-Δ4 isomerase in adrenal cortex mitochondria and microsomes. Endocrinology 134:751–759 [DOI] [PubMed]
- Shankar K, Vaidya VS, Wang T, Bucci TJ, Mehendale HM (2003) Streptozotocin-induced diabetic mice are resistant to lethal effects of thioacetamide hepatotoxicity. Toxicol Appl Pharmacol 188:122–134 [DOI] [PubMed]
- Shapiro BH, Pampori NA, Lapensen DP, Waxman DJ (1994) Growth hormone-dependent and -independent sexually dimorphic regulation of phenobarbital-induced hepatic cytochromes P450 2B1 and 2B2. Arch Biochem Biophys 312:234–239 [DOI] [PubMed]
- Simard J, Ricketts ML, Gringoas S, Soucy P, Feltus FA, Melner MH (2005) Molecular biology of the 3beta-hydroxysteroid dehydrogenase/delta5-delta4 isomerase gene family. Endocr Rev 26:525–582 [DOI] [PubMed]
- Simpson AE (1997) The cytochrome P450 4 (CYP4) family. Gen Pharmacol 28:351–359 [DOI] [PubMed]
- Smyth GK (2004) Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Statistical applications in genetics and molecular biology 3(1), article 3 [DOI] [PubMed]
- Smyth GK (2005) Limma: linear models for microarray data. In: Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W (eds) Bioinformatics and computational biology solutions using R and Bioconductor. Springer, New York, pp 397–420
- Stupans I, Ikeda T, Kessler DJ, Nebert DW (1984) Characterization of a cDNA clone for mouse phenobarbital inducible cytochrome P450b. DNA 3:129–137 [DOI] [PubMed]
- Tatar M, Kipelman A, Epstein D, Tu MP, Yin CM, Garofolo RS (2001) A mutant Drosophila insulin receptor homolog that extends lifespan and impairs neuroendocrine function. Science 292:107–110 [DOI] [PubMed]
- Tatar M, Bartke A, Antebi A (2003) The endocrine regulation of aging by insulin-like signals. Science 299:1346–1351 [DOI] [PubMed]
- Tissenbaum HA, Ruvkun G (1998) An insulin-like signaling pathway affects both longevity and reproduction in Caenorhabditis elegans. Genetics 148:703–717 [DOI] [PMC free article] [PubMed]
- Ueda A, Kakizaki S, Negishi M, Sueyoshi T (2002) Residue threonine 350 confers steroid hormone responsiveness to the mouse nuclear orphan receptor CAR. Mol Pharmacol 61:1284–1288 [DOI] [PubMed]
- Wu Z, Irizarry RA (2004) Preprocessing of oligonucleotide array data. Nat Biotechnol 22:656–658 [DOI] [PubMed]
- Zhang J, Cashman R (2005) Quantitative analysis of FMO gene mRNA levels in human tissues. Drug Metab Dispos 34:19–26 [DOI] [PubMed]
- Ziegler DM (1988) Flavin-containing monooxygenases: catalytic mechanism and substrate specificities. Drug Metab Rev 19:1–32 [DOI] [PubMed]