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. 1983 Mar;45(3):1155–1158. doi: 10.1128/jvi.45.3.1155-1158.1983

Comparison of the sequences and coding of La Crosse and snowshoe hare bunyavirus S RNA species.

H Akashi, D H Bishop
PMCID: PMC256525  PMID: 6834480

Abstract

The sequence of the S RNA of La Crosse bunyavirus was deduced from analyses of DNA copies cloned in the Escherichia coli plasmid pBR322. The S RNA is 984 nucleotides in length, has a base ratio of 31.8% U, 27.0% A, 23.2% C, and 18.0% G, and codes for two distinct gene products that are read from overlapping reading frames in the viral complementary strand. The larger gene product (N, 26.5 x 10(3) daltons) contains 235 amino acids, and the smaller gene product (NSS, 10.4 x 10(3) daltons) has 92 amino acids. Comparisons with the published sequences of the related snowshoe hare bunyavirus S RNA and its gene products (Bishop et al., Nucleic Acids Res. 10:3703-3713, 1982) indicate that there are a total of 114 nucleotide differences (6 additions or deletions and 108 substitutions). Also, there are 22 amino acid differences between the N proteins and 12 amino acid differences between the NSS proteins of the two S RNAs.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bishop D. H., Gould K. G., Akashi H., Clerx-van Haaster C. M. The complete sequence and coding content of snowshoe hare bunyavirus small (S) viral RNA species. Nucleic Acids Res. 1982 Jun 25;10(12):3703–3713. doi: 10.1093/nar/10.12.3703. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Clerex-Van Haaster C. M., Clerex J. P., Ushijima H., Akashi H., Fuller F., Bishop D. H. The 3' terminal RNA sequences of bunyaviruses and nairoviruses (Bunyaviridae): evidence of end sequence generic differences within the virus family. J Gen Virol. 1982 Aug;61(Pt 2):289–292. doi: 10.1099/0022-1317-61-2-289. [DOI] [PubMed] [Google Scholar]
  3. Clerx-van Haaster C. M., Akashi H., Auperin D. D., Bishop D. H. Nucleotide sequence analyses and predicted coding of bunyavirus genome RNA species. J Virol. 1982 Jan;41(1):119–128. doi: 10.1128/jvi.41.1.119-128.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Fuller F., Bishop D. H. Identification of virus-coded nonstructural polypeptides in bunyavirus-infected cells. J Virol. 1982 Feb;41(2):643–648. doi: 10.1128/jvi.41.2.643-648.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Gentsch J. R., Bishop D. H. Small viral RNA segment of bunyaviruses codes for viral nucleocapsid protein. J Virol. 1978 Oct;28(1):417–419. doi: 10.1128/jvi.28.1.417-419.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Haaster C. C., Bishop D. H. Analyses of the 3'-terminal sequences of snowshoe hare and La Crosse Bunyaviruses. Virology. 1980 Sep;105(2):564–574. doi: 10.1016/0042-6822(80)90056-2. [DOI] [PubMed] [Google Scholar]
  7. Obijeski J. F., McCauley J., Skehel J. J. Nucleotide sequences at the terminal of La Crosse virus RNAs. Nucleic Acids Res. 1980 Jun 11;8(11):2431–2438. doi: 10.1093/nar/8.11.2431. [DOI] [PMC free article] [PubMed] [Google Scholar]

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