. Author manuscript; available in PMC: 2009 Aug 1.

Published in final edited form as: Pharmacogenomics. 2008 Oct;9(10):1459–1466. doi: 10.2217/14622416.9.10.1459

Table 1.

Primer and probe sequence for DNA copy-number analysis in qPCR assay.

Gene symbol	Oligo	Sequence	Amplicon size (bp)
ACTB	Forward	CAGCCATGTACGTTGCTATCCA	82
	Reverse	TCACCGGAGTCCATCACGAT
	TaqMan® probe	TGTGCTATCCCTGTACGCCTCTGGCC
LINE1	Forward	TTGCGGCATTATTCACAATAGC	83
	Reverse	GTGCCACATTTTCTTAATCCAGTCT
	TaqMan probe	TGGAACCAACCCAAATGTCCAACAATGA
TOP1	Forward	GGCGAGTGAATCTAAGGATAATGAA	97
	Reverse	TGGATATCTTAAAGGGTACAGCGAA
	TaqMan probe	TCAGTGACTGAAACCATTTTCCCATCATCC
TYMS	Forward	GCCTCGGTGTGCCTTTCA	65
	Reverse	CGTGATGTGCGCAATCATG
	TaqMan probe	CATCGCCAGCTACGCCCTGCTC
EGFR	Forward	GAATTCGGATGCAGAGCTTC	150
	Reverse	GACATGCTGCGGTGTTTTC
	TaqMan probe	TCCCATGATGATCTGTCCCTCACA

qPCR: Qualitative PCR.