Figure 2.—

Relationships between TelContigs and the physical and genetic maps. Capsules containing numbers represent genome assembly contigs and the arrows indicate the sequence orientation. Shaded capsules show contigs whose chromosomal locations are known, while unshaded capsules represent contigs whose genetic or physical map positions were previously unknown. Capsules without numbers depict TelContigs and SubTelContigs that lack overlaps with the genome assembly. Genomic contigs that are shown extending into the TelContig and/or SubTelContig columns exhibited physical overlaps with the respective sequences. A physical overlap between genomic contigs 7.251 and 7.78 is also represented. The NOR spans several sequence contigs, which are not listed due to space limitations. Physical linkages established by TERMINUS are represented by dotted lines, and shading between the dotted lines indicates that we closed the gap by targeted sequencing. Contigs whose chromosomal locations were established or confirmed by RFLP mapping are indicated by asterisks. The outer columns identify the telomeres.