Abstract
Proliferation of pancreatic islet β cells is an important mechanism for self-renewal and for adaptive islet expansion. Increased expression of the Ink4a/Arf locus, which encodes the cyclin-dependent kinase inhibitor p16INK4a and tumor suppressor p19Arf, limits β-cell regeneration in aging mice, but the basis of β-cell Ink4a/Arf regulation is poorly understood. Here we show that Enhancer of zeste homolog 2 (Ezh2), a histone methyltransferase and component of a Polycomb group (PcG) protein complex, represses Ink4a/Arf in islet β cells. Ezh2 levels decline in aging islet β cells, and this attrition coincides with reduced histone H3 trimethylation at Ink4a/Arf, and increased levels of p16INK4a and p19Arf. Conditional deletion of β-cell Ezh2 in juvenile mice also reduced H3 trimethylation at the Ink4a/Arf locus, leading to precocious increases of p16INK4a and p19Arf. These mutant mice had reduced β-cell proliferation and mass, hypoinsulinemia, and mild diabetes, phenotypes rescued by germline deletion of Ink4a/Arf. β-Cell destruction with streptozotocin in controls led to increased Ezh2 expression that accompanied adaptive β-cell proliferation and re-establishment of β-cell mass; in contrast, mutant mice treated similarly failed to regenerate β cells, resulting in lethal diabetes. Our discovery of Ezh2-dependent β-cell proliferation revealed unique epigenetic mechanisms underlying normal β-cell expansion and β-cell regenerative failure in diabetes pathogenesis.
Keywords: Pancreas, islet of Langerhans, histone, epigenetics, diabetes, cell cycle
Proliferation of insulin-secreting β cells in pancreatic islets is an important mechanism for establishing, maintaining, and adapting islet organ function to meet host physiological demands (for review, see Cozar-Castellano et al. 2006; Heit et al. 2006a). Harnessing our understanding of these mechanisms could accelerate development of islet replacement strategies in diseases like autoimmune (type 1) diabetes, but the molecular basis of self-renewal in organs like islets is poorly understood. Islet β cells expand in neonatal humans, mice, and other species, but this proliferation decays thereafter (Teta et al. 2005; Meier et al. 2008), which may promote pandemic (type 2) forms of diabetes mellitus. Thus, investigation of regenerative failure in β cells may elucidate important mechanisms underlying diabetes pathogenesis.
p16INK4a and p19Arf (hereafter Ink4a and Arf) encoded by the Cdkn2a locus are negative regulators of the cell cycle and are thought to limit proliferation in islet β cells (Krishnamurthy et al. 2006) and other tissues (Zindy et al. 1997). Ink4a inhibits specific cyclin-dependent kinases (CDK), including CDK4, a key regulator of β-cell proliferation (Rane et al. 1999), while Arf inhibits the ubiquitin ligase activity of MDM2, thereby stabilizing p53 (for review, see Matheu et al. 2008). Germline Ink4a deficiency in mice permits increased β-cell proliferation, supporting the conclusion that Ink4a constrains β-cell proliferation in mice (Krishnamurthy et al. 2006). Moreover, genome-wide association studies in humans link the CDKN2A locus to type 2 diabetes susceptibility (Grarup et al. 2007; Saxena et al. 2007; Scott et al. 2007; Zeggini et al. 2007; Omori et al. 2008). However, it remains unclear if CDKN2A expression changes in human islets, and how this locus is regulated in islet β cells or other tissues in vivo.
Polycomb group (PcG) proteins are evolutionarily conserved factors that form heteroprotein complexes that modify chromatin structure and gene expression (Ringrose and Paro 2007). Prior studies suggest that PcG proteins are involved in regulating embryonic development, stem cell renewal, and tumor pathogenesis (for review, see Sparmann and van Lohuizen 2006). Two distinct Polycomb-Repressive Complexes, PRC1 and PRC2, have been identified. The PcG protein Enhancer of zeste homolog 2 (Ezh2) functions as a histone methyltransferase in PRC2, which contains Eed, Suz12, and other proteins (Cao et al. 2002). PRC2 initiates and maintains methylation of histone H3 on Lys27 (H3K27), an epigenetic mark that mediates transcriptional repression of chromatin, in part by recruitment of histone deacetylases (van der Vlag and Otte 1999). Recent studies revealed that Ezh2-dependent H3K27 trimethylation (H3K27me3) represses target genes like Ink4a/Arf to control growth of cancer cell lines and embryonic fibroblasts (Bracken et al. 2003, 2007), but the role of Ezh2 in physiological expansion or regeneration of organs like pancreatic islets has not been reported, to our knowledge. Here we show that Ezh2 is required to regulate histone methylation and repression of the Ink4a/Arf locus in pancreatic islets, thereby permitting physiological islet β-cell expansion in neonatal mice, and adaptive β-cell regeneration after conditional chemical ablation of β-cell in adults, functions that may prevent β-cell replication failure and diabetes mellitus pathogenesis.
Results
Declining Ezh2 levels accompany reduced proliferation by pancreatic islet β cells
β-Cell proliferation in pancreatic islets declines with age in rodents and humans, with the sharpest reductions in juveniles (Teta et al. 2005; Krishnamurthy et al. 2006; Meier et al. 2008). Reduced β-cell proliferation in mice corresponds with increased islet expression of Ink4a and Arf (Fig. 1A,B,D; Nielsen et al. 1999; Krishnamurthy et al. 2006). Prior studies suggest that PcG proteins regulate Ink4a/Arf expression and proliferation in cultured fibroblasts (Bracken et al. 2003, 2007). To investigate possible roles in proliferation of pancreatic β cells, we examined expression of genes encoding PcG proteins, including Ezh1, Ezh2, Eed, Suz12, Cbx4, and Phc1 in islets isolated from C57BL/6 mice (Fig. 1C,D; Supplemental Fig. 1). Using real-time RT–PCR, we found that mRNA encoding each of these factors was detectable in mouse pancreatic islets from birth to 1 yr of age (Supplemental Fig. 1). Unlike other PcG factors tested, levels of Ezh2 mRNA declined during this period, marked by a rapid reduction in neonatal and juvenile mice, followed by a slower decline in aging adults (Fig. 1C). Immunohistology allowed detection of Ezh2 protein in islet β-cell nuclei (Fig. 1E–G) and revealed that Ezh2 protein level in β cells from 384-d-old mice (Fig. 1H–J) was reduced compared with β cells from 23-d-old mice (Fig. 1E–G), a result corroborated by Western blotting of islet proteins (Fig. 1D). Likewise, RT–PCR analysis of isolated human islets revealed age-dependent reduction of EZH2 mRNA compared with SUZ12, with the greatest reductions occurring in juveniles, followed by a slower decline in adults (Fig. 2A,B). Immunohistology revealed EZH2 protein reduction and INK4A increase in human pancreatic β cells with advancing age (Fig. 2C–J). Consistent age-dependent reductions of Ezh2 in vivo have only been reported previously in the kidney (Metsuyanim et al. 2008).
Histone modifications at the Ink4a/Arf locus accompany Ezh2 loss in β cells
Ezh2-dependent H3K27me3 represses Ink4a/Arf expression in cultured cells (Bracken et al. 2007), but to our knowledge, PRC2 regulation of Ink4a/Arf expression or associated in vivo histone modifications in islets has not been reported. To assess if pancreatic islet Ezh2 reduction leads to increased islet expression of Ink4a and Arf, we performed chromatin immunoprecipitation (ChIP) on isolated mouse islets. These studies revealed direct association of Ezh2 with Ink4a/Arf and with the linked Cdkn2b gene encoding the CDK inhibitor p15Ink4b (Ink4b) (Fig. 3A,B). Compared with islets from 1-mo-old mice, we found reduced levels of Ezh2 protein and H3K27me3 associated with both Ink4a and Arf in islets from mice aged 11 mo (Fig. 3B,C), suggesting that attenuated Ezh2 levels and function may contribute to increased Ink4a/Arf expression in mouse pancreatic islets. In addition, we detected significantly increased histone H3K4me3 and histone acetylation at the Ink4a/Arf locus in older mice (Fig. 3D,E), but no significant change in levels of H3K9me3 or control IgG association (Fig. 3F,G). Since the catalytic subunit Ezh2 of the PRC2 complex specifically methylates histone H3 at Lys27 (Cao et al. 2002; Su et al. 2003), we conclude that Ezh2 loss indirectly affects H3K4 methylation and H3 acetylation at Ink4a/Arf. In contrast, association of Ezh2, H3K27me3, H3K4me3, and H3 acetylation with p15Ink4b was not significantly altered in young and older mice (Fig. 3B–E), consistent with the finding that pancreatic islet p15Ink4b mRNA levels did not change in aging mice (Krishnamurthy et al. 2006).
Conditional Ezh2 inactivation in islet β cells induces premature Ink4a/Arf expression
Several signaling pathways influence expression of the Ink4a/Arf locus (for review, see Kim and Sharpless 2006). To determine whether Ezh2 regulates Ink4a/Arf expression in vivo, we generated mice that permitted conditional Ezh2 loss in β cells. Transgenic mice producing Cre recombinase in β cells (RIP-Cre) (Herrera 2000; Heit et al. 2006b) were intercrossed with mice harboring a floxed Ezh2 allele (Su et al. 2003) to generate progeny with the RIP-Cre; Ezh2f/f genotype (abbreviated βEzh2KO). Littermate control islets expressed Ezh2 mRNA and Ezh2 protein in β cells, but βEzh2KO islets were deficient for Ezh2 mRNA, and β cells lacked Ezh2 as judged by real-time RT–PCR and immunostaining (Fig. 4A,B), results corroborated by Western blotting of islet proteins (Supplemental Fig. 2A). In contrast, islet mRNA levels of Bmi-1 and Suz12, and Ezh2 protein levels in pancreatic non-β cells (e.g., acinar cells) were indistinguishable in βEzh2KO and littermate control mice (Fig. 4A,B). Levels of Ink4a protein were increased in βEzh2KO β cells (Fig. 4C), and mRNA levels of Ink4a and Arf were increased in βEzh2KO islets compared with control littermates (Fig. 4D,E). Thus, conditional Ezh2 loss in β cells led to derepression of established Ezh2 targets. Consistent with these findings, ChIP studies of islets from 1-mo-old βEzh2KO mice revealed severe, premature reduction of Ezh2 and H3K27me3 levels (Fig. 4F,G) and increased H3K4me3 (Fig. 4H) and H3 acetylation (Supplemental Fig. 2C) associated with Ink4a/Arf. Thus, Ezh2 is required to maintain H3K27 methylation and repression of the Ink4a/Arf locus in pancreatic β cells. In contrast, we did not detect changes in expression of mRNAs encoding other members of the Ink4 or Cip/Kip families of CDK inhibitors, levels of H3K9me3 or control IgG associated with Ink4a/Arf (Supplemental Fig. 2B,D,E), indicating that Ezh2 may have a unique role in controlling expression of β-cell cycle regulators. Islet Ink4a/Arf expression increased in aging βEzh2KO mice (Fig. 4D,E), although the level of this increase was blunted compared with controls; thus, Ezh2-independent mechanisms are likely to regulate Ink4a and Arf levels in mouse islets.
β-Cell hypoplasia and mild diabetes mellitus in βEzh2KO mice
To assess the physiological effects of Ezh2 inactivation in βEzh2KO mice, we measured blood glucose levels after overnight fasting and refeeding. Littermate controls, including those harboring the RIP-Cre transgene used in these studies (Herrera 2000; Heit et al. 2006b), maintained normoglycemia, but βEzh2KO mice had significant hyperglycemia by 4–6 wk of age, including post-prandial hyperglycemia exceeding 200 mg/dL, an established criterion for diabetes in humans (Fig. 5A,B). Although this impaired glucose regulation improved modestly with aging, we observed persistent post-prandial hyperglycemia and diabetes in older βEzh2KO mice (Fig. 5B; Supplemental Fig. 3D). Likewise acute glucose challenge by intraperitoneal injection following overnight fasting revealed significantly elevated blood glucose levels and prolonged hyperglycemia in βEzh2KO mice compared with littermate controls (Fig. 5C,D; Supplemental Fig. 3B,C), defects that persisted in βEzh2KO mice throughout adulthood (Supplemental Fig. 3E). In contrast, body mass and insulin sensitivity were not detectably altered in βEzh2KO mice (Supplemental Fig. 3A,F). Thus, Ezh2 in β cells is essential for maintaining normoglycemia, and Ezh2 deficiency in β cells resulted in mild, nonlethal diabetes mellitus. Following an overnight fast or after glucose challenge, βEzh2KO mice had a 50% reduction in plasma insulin levels compared with littermates (Fig. 5E). Consistent with their postnatal hypoinsulinemia, βEzh2KO mice had reduced insulin content from 1 mo of age compared with control littermates (Fig. 5F). In contrast, insulin content in whole pancreas from newborn βEzh2KO mice (P1) was indistinguishable from littermates (Fig. 5F), indicating that β-cell development is not detectably impaired in βEzh2KO mice. Likewise, islet β-cell insulin content and insulin secretion by isolated islets challenged with glucose or amino acids were indistinguishable in βEzh2KO mice and controls (Supplemental Fig. 3G–I).
To test whether reduced pancreatic insulin content in βEzh2KO mice reflected decreased β-cell mass, we assessed the pancreata of these mice and littermate controls at birth, 1 mo, and 4 mo of age. The mass of β cells in newborn mice was not significantly different between βEzh2KO and littermate control mice (Fig. 5G). β-Cell mass in βEzh2KO mice at 1 mo of age, however, was reduced compared with littermate controls (P < 0.01) (Fig. 5G). Likewise, incorporation of bromodeoxyuridine (BrdU) in βEzh2KO mice at 1 mo showed that β-cell proliferation was reduced (Fig. 5H,I). Compared with controls, we did not detect changes in β-cell size in βEzh2KO mice (113 ± 3.6 μm2 for βEzh2KO; 120 ± 3.3 μm2 for littermate controls, P > 0.05). Thus, Ezh2 is essential for β-cell proliferation and establishing appropriate β-cell mass in juvenile mice. Mild hyperglycemia in mice is known to stimulate β-cell proliferation (Alonso et al. 2007), and we observed that β-cell mass and pancreatic insulin content increased in βEzh2KO mice as they aged (Fig. 5F,G). This late phase of β-cell expansion did not re-establish normal β-cell mass or glucose control in βEzh2KO mice (Supplemental Fig. 3). Nevertheless, our data also provide evidence for Ezh2-independent mechanisms that regulate β-cell expansion.
Cdkn2a inactivation restores normoglycemia and β-cell expansion in βEzh2KO mice
We postulated that increased expression of Ink4a/Arf encoded by the Cdkn2a locus might promote diabetes pathogenesis in βEzh2KO mice; we therefore tested whether germline Cdkn2a loss in βEzh2KO mice could prevent β-cell replication failure and diabetes pathogenesis. We intercrossed mice to generate RIP-Cre; Ezh2f/f; Cdkn2a−/− (abbreviated βEzh2KO; Cdkn2a−/−) and littermate control mice. Unlike βEzh2KO littermates, which developed fasting hyperglycemia and overt post-prandial diabetes by 4 wk, βEzh2KO; Cdkn2a−/− mice maintained normal glucose levels during fasting and random feeding (Fig. 6A; data not shown). Similarly, fasted βEzh2KO; Cdkn2a−/− mice challenged with intraperitoneal glucose showed no evidence of impaired tolerance (Fig. 6B,C). Consistent with these findings, serum insulin levels during glucose challenge in βEzh2KO; Cdkn2a−/− mice did not differ significantly from those in nondiabetic control littermates (Fig. 6D). Thus, Cdkn2a deficiency was sufficient to restore normoglycemia and insulin levels to mice lacking β-cell Ezh2. Moreover, pancreatic insulin content and β-cell mass, and β-cell proliferation in βEzh2KO; Cdkn2a−/− mice and littermate controls were indistinguishable (Fig. 6E–G). Taken together, these data indicate that increased Ink4a/Arf expression, resulting in reduced β-cell proliferation, is a principal cause of premature diabetes onset in βEzh2KO mice.
Impaired β-cell regeneration and severe diabetes after streptozotocin (STZ) challenge in βEzh2KO mice
Diabetes pathogenesis is a complex process that reflects β-cell adaptations to systemic stress. Destruction of β cells by toxins like STZ can lead to diabetes and subsequent regenerative β-cell expansion with restoration of β-cell mass in mice (Wang et al. 1996; Krishnamurthy et al. 2006). We treated mice with STZ to examine islet Ezh2 expression and function in adult β-cell regeneration and diabetes pathogenesis. Following STZ-induced β-cell destruction, Ezh2 mRNA and protein levels increased in surviving islet β cells (Fig. 7A,B). Consistent with our other observations that Ink4a/Arf expression is repressed by Ezh2, we observed reduced Ink4a and Arf mRNA levels in islets from STZ-challenged mice (Fig. 7C). However, by 15 d after STZ challenge, immunohistochemical detection showed elevated levels of nuclear Ink4a protein in βEzh2KO islet β cells compared with those from controls (Fig. 7D), supporting the possibility that Ezh2 is required for repression of Ink4a/Arf expression during β-cell regeneration.
To assess if Ezh2 is required for adaptive β-cell regeneration following STZ, we assessed β-cell proliferation and mass in STZ-challenged βEzh2KO mice. β-Cell mass reduction was indistinguishable in βEzh2KO mice and control mice 5 d after STZ challenge (Fig. 7F), consistent with the view that STZ sensitivity was similar in both mouse groups. BrdU incorporation was markedly increased in β cells from controls compared with βEzh2KO islets (Fig. 7D,E). In contrast, BrdU incorporation in acinar cells from both groups of mice was indistinguishable (Fig. 7E). Consistent with this finding, β-cell mass from 2 to 8 wk after STZ challenge was significantly increased in control mice compared with βEzh2KO mice (Fig. 7F). After STZ challenge, βEzh2KO developed severe diabetes that persisted throughout the 9 wk course of our studies, with average blood glucose levels exceeding 500 mg/dL during ad libitum feeding (Fig. 7G,H). In contrast, control mice became moderately diabetic after STZ challenge but had clearly improved glucose control and survival by 3–4 wk and thereafter (Fig. 7G,H), coinciding with increases of β-cell mass (Fig. 7F). Thus, Ezh2 is required for compensatory regeneration of β cells in response to STZ-induced diabetes.
Discussion
Establishment and maintenance of appropriate β-cell growth and mass is crucial for metabolic balance; thus, the molecular mechanisms governing β-cell proliferation are the focus of intensive studies. The first postnatal months of life in mice, and the first years of life in humans, are crucial periods of islet β-cell expansion that result in establishment of appropriate β-cell mass (Georgia and Bhushan 2004; Kushner et al. 2005; Teta et al. 2005; Meier et al. 2008). While prior studies had linked Ink4a/Arf induction with attenuated islet β-cell growth in aging (Krishnamurthy et al. 2006), the roles of these cell cycle regulators during β-cell expansion in juvenile animals and the mechanisms governing their expression had not been identified. Thus, our demonstration that Ink4a/Arf derepression upon Ezh2 loss can induce replication failure of islet β cells in neonatal mice provides unique evidence for PcG regulation of physiological islet cell growth.
Ezh2 and the PRC2 complex regulate expression of multiple targets throughout the genome (Kamminga et al. 2006; Bracken et al. 2007); thus, prior to our studies, it was unclear if Ezh2 regulation of Ink4a/Arf expression was the basis for proliferative failure in islet β cells following Ezh2 loss. In this study, we found that deficiency of Ink4a/Arf expression by deletion of the Cdkn2a locus prevents islet β-cell hypoplasia in mice with conditional β-cell Ezh2 loss. This finding supports the view that Ezh2 controls neonatal islet β-cell expansion in juvenile mice by directly regulating Ink4a/Arf. Following Ezh2 loss, we found increased histone H3K4 trimethylation at the Ink4a/Arf locus, an epigenetic mark known to be regulated by nuclear protein complexes containing the trithorax group (TrxG) protein MLL (Hughes et al. 2004; Yokoyama et al. 2004). Consistent with these results, Dhawan et al. (2009) found that MLL association with Ink4a/Arf increased with aging. Collectively, these findings suggest that multiple dynamic histone modifications likely regulate expression of Ink4a/Arf and replication in islet cells.
β-Cell proliferation declines rapidly in juvenile mice and humans, followed by a sustained slower reduction in adulthood (Teta et al. 2005; Meier et al. 2008). Accompanying these two phases of proliferative attenuation, we observed a reduction of Ezh2 mRNA in islet β cells of both species (Figs. 1, 2). Our studies with βEzh2KO mice show that premature Ezh2 loss leads to induction of the Ezh2 targets Ink4a and Arf in juvenile mice, impaired β-cell proliferation and expansion, and persistent mild diabetes. While these results are consistent with the possibility that Ezh2 loss may regulate reductions of β-cell proliferation in the neonatal period, our finding that islet Ink4a/Arf expression increases in adult βEzh2KO mice suggests that factors other than Ezh2 regulate Ink4a/Arf to limit β-cell proliferation in aging. Thus, Ezh2 is unlikely to be the sole or limiting molecular determinant of replicative senescence in adult mouse β cells.
Islet β cells proliferate to meet systemic demands (for review, see Heit et al. 2006a). Following STZ-induced β-cell destruction, expression of Ezh2 in surviving β cells increased, leading to suppression of Ink4a levels. Moreover, impaired β-cell regeneration and lethal diabetes in βEzh2KO mice argue that Ezh2 is required for adaptive β-cell proliferation. Thus our work reveals that in neonates and in the pathological setting of STZ-induced diabetes, elevated Ezh2 levels accompany β-cell proliferation. Supporting the hypothesis that Ezh2 may regulate general physiological or regenerative β-cell growth, we recently observed increased Ezh2 expression in maternal islets during pregnancy (H. Chen and S.K. Kim, unpubl.), a state characterized by adaptive β-cell expansion in mice and humans (Karnik et al. 2007). These findings motivate further studies to identify signaling pathways that regulate β-cell Ezh2 expression. Additional studies are also needed to test if enhanced Ezh2 levels or function might promote β-cell growth in aging and other states associated with β-cell failure and increased diabetes risk. If so, then understanding the epigenetic mechanisms governing islet self-renewal may accelerate development of strategies for islet replacement or regeneration.
In conclusion, our work, together with studies of Dhawan et al. (2009) on Bmi-1 and prior studies on the tumor suppressor protein menin (Karnik et al. 2005, 2007), provides unique evidence that histone modifications, regulated by protein complexes containing TrxG proteins and PcG proteins, are required to repress genes encoding β-cell cycle inhibitors, thereby permitting physiological and adaptive β-cell expansion. Collectively, these studies argue that dynamic epigenetic regulation orchestrated by PcG and TrxG protein complexes controls β-cell growth and differentiation.
Materials and methods
Animals and genotyping
Ezh2f/f mice with loxP sites flanking exons 16 to 19 of the Ezh2 gene and RIP-Cre mice expressing Cre recombinase from rat insulin 2 gene promoter elements were described previously (Herrera 2000; Su et al. 2003; Heit et al. 2006b). These two strains were intercrossed to generate RIP-Cre; Ezh2f/f mice (βEzh2KO) mice together with their littermate controls on a mixed 129/Sv; C57BL/6 genetic background. Cdkn2a−/− mice on a C57BL/6 genetic background carried a targeted deletion of exons 2/3 of the Cdkn2a gene that eliminates both Ink4a and Arf expression (Serrano et al. 1996), and were obtained from Mouse Models of Human Cancers Consortium at the National Cancer Institute (NCI), USA. Triple knockout mice lacking Ezh2 in β cells, Ink4a, and Arf were produced from subsequent intercrosses between Cdkn2a−/− and βEzh2KO mice. All mice were genotyped routinely by PCR of tail genomic DNA for floxed Ezh2, Cdkn2a alleles and the RIP-Cre transgene as previously described. Mice used in this study were age- and gender-matched littermates. Inbred C57BL/6 mice were purchased from the National Cancer Institute (NCI). All mice were housed in a pathogen-free environment on a 12-h light/dark cycle with ad libitum access to water and normal chow in the animal facility of Stanford University. All animal experiments and methods were approved by the Institutional Animal Care and Use Committee (IACUC) of Stanford University.
Real-time RT–PCR and Western blot analysis
Mouse pancreatic islets were isolated and purified by a standard procedure (Chen et al. 2001). Total RNA from isolated islets was purified using the Absolutely RNA miniprep purification kit (Stratagene) according to the manufacturer's instructions, and the RNA concentration was measured with a RiboGreen RNA quantification assay (Invitrogen). One-step quantitative RT–PCR was performed and analyzed using an ABI Prism 7300 detection system (Applied Biosystems) with TaqMan one-step RT–PCR Master Mix Reagents and appropriate amounts (10 to 100 ng) of islet total RNA as the template. We calculated the ratio of mRNA for the gene of interest to the amount of internal control mRNA of peptidylprolyl isomerase A (cyclophilin A, PPIA), and then normalized the ratio for each gene to its median. Primer and probe sequences are listed in Supplemental Table 1. For Western blots, total islet protein was prepared as described previously (Chen et al. 2005). Equal amounts of protein were resolved on SDS-PAGE and transferred to polyvinylidine fluoride membranes (Amersham Pharmacia) for immunoblotting with specific antibodies, including rabbit polyclonal anti-human EZH2 (1:1000; Upstate Biotechnologies), mouse monoclonal anti-INK4a (1:2000; Santa Cruz Biotechnologies) and mouse monoclonal anti-β-actin (1:4000; Sigma). Signal was visualized using the ECL detection system (Amersham Pharmacia) on Kodak film after further incubation with HRP-conjugated secondary antibodies.
Physiological studies
After weaning mice, we monitored body weight and blood glucose levels in ad libitum fed mice, after 16 h of overnight fasting, and 1 h after refeeding (“1 h post-prandial”) at the ages indicated in the text and figures. We used the OneTouch Ultra glucose meter (LifeScan) to measure glucose levels in blood from tail vein punctures.
Glucose tolerance tests were performed on mice after a 16-h overnight fast, and the blood glucose levels were determined immediately before (0) and 5, 10, 20, 30, 45, 60, 90, and 120 min after intraperitoneal injection of glucose (2 g/kg or 3 g/kg body weight as indicated). For measurement of plasma insulin levels during these glucose tolerance tests, we collected tail vein blood at 0, 15, and 45 min after 3 g/kg body weight of glucose injection. We measured insulin levels using a mouse insulin ELISA kit (ALPCO diagnostics). For insulin tolerance tests, mice were fasted for 6 h then received intraperitoneal injection of 0.75 U/kg body weight of insulin (Sigma); glucose levels at 0, 10, 20, 30, 40, 60, and 90 min after injection were then measured.
For the measurement of total pancreas insulin content, the whole pancreas was removed from the animal at the specific ages, then homogenized and extracted with acid ethanol (75% ethanol: 2% HCl: 23% H2O [v/v/v]) overnight at 4°C. Insulin content was measured in the diluted extraction solution using a mouse insulin ELISA kit. We injected some male mice intraperitoneally at 4 wk of age with BrdU (100 mg/kg; Sigma) once every day for 3 d. Pancreata were harvested for histology and immunostaining of BrdU and morphormetric counting of β-cell proliferation rate, as described previously (Heit et al. 2006b).
In vivo STZ treatment and BrdU incorporation
Mice of the indicated genotypes, including gender-matched controls, aged 5–7 wk, were treated with a single intraperitoneal injection of freshly dissolved STZ (Sigma; 150 mg/kg or 100 mg/kg body weight as indicated) in 0.1 mol/L sodium citrate (pH 4.5). After injection, blood samples were taken from a tail clip, and glucose values were measured every other 2 d in the first week and thereafter once per week. Mouse deaths were recorded, with exclusion of acute STZ-induced death (defined as death within 2 d after STZ injection). After 1 wk of STZ treatment, some Ezh2f/f and βEzh2KO littermates were fed with BrdU-containing drinking water (1 mg/mL) for 1 wk, followed by immunostaining of pancreas sections for BrdU incorporation and insulin protein. Some Ezh2f/f mice were treated with 100 mg/kg body weight of STZ or with the same amount of sodium citrate (vehicle) for 6 d followed by islet isolation for gene expression studies. Five days, 15 d, and 62 d after STZ (or vehicle) treatment, other animals were sacrificed to obtain pancreata for histology and immunostaining of Ezh2, Ink4a, and insulin.
Histology, immunofluorescence, and immunohistochemistry
We used a standard paraformaldehyde fixation, paraffin-embedding, and immunostaining protocol, except for Ink4a detection. For Ink4a immunohistology, the pancreas was fixed in Fekete's acid alcohol solution (61% ethanol, 4.3% glacial acetic acid, and 3.5% formalin) as described previously (Krishnamurthy et al. 2004). Immunohistochemical analysis was performed on 5-μm-thick sections of pancreatic tissues after antigen retrieval (DAKO) and using the following primary antibodies: guinea pig anti-pig insulin (1:400; Sigma), rabbit anti-Ezh2 (1:100; Epigentek), mouse monoclonal anti-INK4a (1:50; Santa Cruz Biotechnologies), and mouse monoclonal anti-BrdU (Amersham Pharmacia). We detected immune complexes with secondary antibodies conjugated with either Cy3, fluorescein isothiocyanate (Jackson ImmunoResearch), or horseradish peroxidase (Vector Laboratories). For measuring pancreatic β-cell mass or BrdU by morphometry, four or six mice of each genotype at every age were analyzed. At least five sections separated by more than 300 μm were immunostained and assessed for each mouse. Images were analyzed with ImagePro program, and pancreatic β-cell mass and percentage of BrdU-positive β cells were calculated as described previously (Heit et al. 2006b).
Islet insulin secretion and islet insulin content measurement
We cultured isolated islets overnight in standard media, then used these for batch incubation experiments to detect glucose- and arginine-stimulated insulin secretion, as described previously (Chen et al. 2001; Rulifson et al. 2007). Briefly, in a microplate, five islets of similar size were handpicked into each well with modified Krebs-Ringer bicarbonate buffer (KRBB) containing 3 mM glucose. After washes, islets were incubated consecutively in the indicated low and high levels of glucose or arginine KRBB for 1 h. Islet total insulin was extracted with acid ethanol. Insulin level was measured with a mouse insulin ELISA kit (ALPCO Diagnostics). Islet DNA was quantified with PicoGreen (Invitrogen) to normalize insulin levels.
Pancreatic islet ChIP analysis
ChIPs were performed using a ChIP kit from Upstate Biotechnologies. Briefly, freshly isolated pancreatic islets were pooled and treated with 2% formaldehyde for cross-linking for 20 min at room temperature. After washing, islets were dissolved in SDS lysis buffer containing a proteinase inhibitor cocktail followed by sonication to shear chromatin. Precleared chromatin from 150–300 islets was used for each ChIP sample with incubation of 1 to 5 μg of the appropriate antibodies overnight at 4°C. The antibodies used in the ChIP assays included rabbit anti-Ezh2, rabbit anti-trimethyl-Histone H3 (Lys27), rabbit anti-trimethyl-Histone H3 (Lys4), rabbit anti-trimethyl-Histone H3 (Lys9), rabbit anti-acetyl-Histone H3 (Lys9/14) (Upstate Biotechnologies), and rabbit polyclonal IgG (Santa Cruz Biotechnologies, catalog no. SC-805, used for the “IgG control”). After incubation, the immunoprecipitated chromatin DNA was harvested, cross-link reversed, and purified. After measurement of DNA concentration by PicoGreen DNA assay (Invitrogen), equivalent amounts of chromatin DNA from every sample were quantified by real-time quantitative PCR in the ABI Prism 7300 detection system (Applied Biosystems). The PCR primer and probe sequences are listed in Supplemental Table 2.
Gene expression in human pancreatic islets and pancreas sections
Frozen or fresh isolated pancreatic islets were recovered from donors with appropriate consent at the University of Alabama at Birmingham Islet Cell Resource Center. Human islet mRNA levels for EZH2 and SUZ12 were measured by real-time RT–PCR using the similar protocols used for mouse islets, except we used human gene-specific primers and probes as follows: human EZH2: forward, 5′-TTGCCAAGAGAGCCATCCA-3′, reverse, 5′-GCATCAGCCTGGCTGTATCTG-3′, and probe, 5′-ACTGGCGAAGAGCTGTTTTTTGA-3′; human SUZ12: forward, 5′- GGATCCTGAATGGCTAAGAGAAAAA-3′, reverse, 5′- TCATCACTTCTTTCTCTCCTTCATTAAC-3′, and probe, 5′-CCATTACACAAATTGAAGAGTTTTCTGA-3′; and human peptidylprolyl isomerase A (cyclophilin A, PPIA): forward, 5′-ATAAGGGTTCCTGCTTTCACAGAA-3′, reverse, 5′-GCCATTATGGCGTGTGAAGTC-3′, and probe, 5′- TCCAGGGTTTATGTGTCAGGGTG-3′. Pancreas sections from six normal human subjects at the age of 2, 4, 5, 64, 75, 79 yr old, respectively, were obtained at the University of Pittsburgh. The immunohistology methods for detecting EZH2 and INK4A were similar to that used for mouse pancreas tissues as described above, except that the antigen retrieval step was performed in citrate buffer (10 mM citric acid, 0.05% Tween 20 at pH 6.0) for 20 min at 95°C for EZH2 staining. Immunostaining of EZH2 and INK4A was repeated on at least three sections for every donor pancreas.
Statistical analysis
Results were expressed as the mean ± SE, or shown by box-whisker plots indicating median, 25th to 75th percentile (boxes) and entire range (whiskers). Statistical analysis was performed with one-way ANOVA, two-way repeated measures ANOVA, unpaired Student's t-test, or log-rank survival test. Differences were considered to be significant at P < 0.05.
Acknowledgments
We thank Drs. H. Chang, J. Wysocka, J. Sage, and X. Li for helpful discussions and advice; Dr. P. Herrera for mice; the Islet Resources Centers Consortium for materials; Dr. A. Bhushan for communicating unpublished studies; and members of the Kim laboratory for comments on the manuscript. H.C. was supported by the NIH Ruth L. Kirschstein NRSA/Stanford Regenerative Medicine Training Program. Work in the Kim laboratory was supported by the NIH, the Snyder Foundation, the Larry L. Hillblom Foundation, and the Juvenile Diabetes Research Foundation. S.K.K. is an investigator in the Howard Hughes Medical Institute. H.C. and S.K.K. generated hypotheses and designed experiments. R.B. and J.L.C. obtained human tissues and cells. I-H.S. and A.T. generated Ezh2f mice. H.C. and X.G. performed experiments. H.C. and S.K.K. wrote the manuscript.
Footnotes
Article is online at http://www.genesdev.org/cgi/doi/10.1101/gad.1742509.
Supplemental material is available at http://www.genesdev.org.
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