Abstract
Rotavirus diarrhea in 453 pediatric patients (29.8% of 1,518) was studied in greater Bangkok during 1985 to 1987. The disease persisted all year, increasing in incidence from August to January (30 to 50%). Polyacrylamide gel electrophoresis of rotavirus RNA from these patients and from an additional 46 patients of a 1982 to 1983 epidemic revealed 26 electropherotypes, 4 with short (S) and 22 with long (L) RNA profiles. Of the analyzed specimens, 85.5% were L forms. Only one or a few electropherotypes predominated in each epidemic, whereas others appeared sporadically at low frequencies. Shifts in the predominant electropherotypes were observed in every epidemic. Of these, 126 strains were tested for subgroup and serotype by monoclonal antibody enzyme immunoassay. Serotype 4 prevailed from 1982 to 1983, while serotype 1 was encountered more frequently than serotypes 2 and 4 from 1985 to 1987. A complete correlation was found between the electrophoretic migration of segments 10 and 11 and the serologically defined subgroup specificity. Distinct electropherotypes occurred within the same serotype, and strains with the identical electropherotype always showed the same serotype specificity. No specific electropherotype or serotype correlated with patient age. In this study, atypical rotaviruses and mixed infections with different rotaviruses were identified.
Full text
PDF![617](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/5bc598bca841/jcm00039-0217.png)
![618](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/965feaee8649/jcm00039-0218.png)
![619](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/18b133371476/jcm00039-0219.png)
![620](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/d637da3da206/jcm00039-0220.png)
![621](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/b2c9096f9c42/jcm00039-0221.png)
![622](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/310f15c956cd/jcm00039-0222.png)
![623](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/fd66d41e30d9/jcm00039-0223.png)
![624](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a28/269829/9d6045779a2e/jcm00039-0224.png)
Images in this article
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Albert M. J., Bishop R. F., Shann F. A. Epidemiology of rotavirus diarrhea in the Highlands of Papua, New Guinea, in 1979, as revealed by electrophoresis of genome RNA. J Clin Microbiol. 1983 Jan;17(1):162–164. doi: 10.1128/jcm.17.1.162-164.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Beards G. M. Polymorphism of genomic RNAs within rotavirus serotypes and subgroups. Arch Virol. 1982;74(1):65–70. doi: 10.1007/BF01320783. [DOI] [PubMed] [Google Scholar]
- Brown D. W., Mathan M. M., Mathew M., Martin R., Beards G. M., Mathan V. I. Rotavirus epidemiology in Vellore, south India: group, subgroup, serotype, and electrophoretype. J Clin Microbiol. 1988 Nov;26(11):2410–2414. doi: 10.1128/jcm.26.11.2410-2414.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Clark H. F., Hoshino Y., Bell L. M., Groff J., Hess G., Bachman P., Offit P. A. Rotavirus isolate WI61 representing a presumptive new human serotype. J Clin Microbiol. 1987 Sep;25(9):1757–1762. doi: 10.1128/jcm.25.9.1757-1762.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Coulson B. S., Unicomb L. E., Pitson G. A., Bishop R. F. Simple and specific enzyme immunoassay using monoclonal antibodies for serotyping human rotaviruses. J Clin Microbiol. 1987 Mar;25(3):509–515. doi: 10.1128/jcm.25.3.509-515.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Desselberger U. Molekulare Epidemiologie der Rotaviren. Immun Infekt. 1988 Oct;16(5):182–188. [PubMed] [Google Scholar]
- Espejo R. T., Muñz O., Serafin F., Romero P. Shift in the prevalent human rotavirus detected by ribonucleic acid segment differences. Infect Immun. 1980 Feb;27(2):351–354. doi: 10.1128/iai.27.2.351-354.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Estes M. K., Graham D. Y., Dimitrov D. H. The molecular epidemiology of rotavirus gastroenteritis. Prog Med Virol. 1984;29:1–22. [PubMed] [Google Scholar]
- Estes M. K., Palmer E. L., Obijeski J. F. Rotaviruses: a review. Curr Top Microbiol Immunol. 1983;105:123–184. doi: 10.1007/978-3-642-69159-1_3. [DOI] [PubMed] [Google Scholar]
- Georges-Courbot M. C., Beraud A. M., Beards G. M., Campbell A. D., Gonzalez J. P., Georges A. J., Flewett T. H. Subgroups, serotypes, and electrophoretypes of rotavirus isolated from children in Bangui, Central African Republic. J Clin Microbiol. 1988 Apr;26(4):668–671. doi: 10.1128/jcm.26.4.668-671.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gerna G., Passarani N., Sarasini A., Battaglia M. Characterization of serotypes of human rotavirus strains by solid-phase immune electron microscopy. J Infect Dis. 1985 Dec;152(6):1143–1151. doi: 10.1093/infdis/152.6.1143. [DOI] [PubMed] [Google Scholar]
- Herring A. J., Inglis N. F., Ojeh C. K., Snodgrass D. R., Menzies J. D. Rapid diagnosis of rotavirus infection by direct detection of viral nucleic acid in silver-stained polyacrylamide gels. J Clin Microbiol. 1982 Sep;16(3):473–477. doi: 10.1128/jcm.16.3.473-477.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hoshino Y., Wyatt R. G., Greenberg H. B., Flores J., Kapikian A. Z. Serotypic similarity and diversity of rotaviruses of mammalian and avian origin as studied by plaque-reduction neutralization. J Infect Dis. 1984 May;149(5):694–702. doi: 10.1093/infdis/149.5.694. [DOI] [PubMed] [Google Scholar]
- Kalica A. R., Greenberg H. B., Espejo R. T., Flores J., Wyatt R. G., Kapikian A. Z., Chanock R. M. Distinctive ribonucleic acid patterns of human rotavirus subgroups 1 and 2. Infect Immun. 1981 Sep;33(3):958–961. doi: 10.1128/iai.33.3.958-961.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kasempimolporn S., Louisirirotchanakul S., Sinarachatanant P., Wasi C. Polyacrylamide gel electrophoresis and silver staining for detection of rotavirus in stools from diarrheic patients in Thailand. J Clin Microbiol. 1988 Jan;26(1):158–160. doi: 10.1128/jcm.26.1.158-160.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Konno T., Sato T., Suzuki H., Kitaoka S., Katsushima N., Sakamoto M., Yazaki N., Ishida N. Changing RNA patterns in rotaviruses of human origin: demonstration of a single dominant pattern at the start of an epidemic and various patterns thereafter. J Infect Dis. 1984 May;149(5):683–687. doi: 10.1093/infdis/149.5.683. [DOI] [PubMed] [Google Scholar]
- Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
- Lambert J. P., Marissens D., Marbehant P., Zissis G. Prevalence of subgroup 1, 2, and 3 rotaviruses in Belgian children suffering from acute diarrhea (1978-1981). J Med Virol. 1983;11(1):31–38. doi: 10.1002/jmv.1890110105. [DOI] [PubMed] [Google Scholar]
- Linhares A. C., Gabbay Y. B., Mascarenhas J. D., Freitas R. B., Flewett T. H., Beards G. M. Epidemiology of rotavirus subgroups and serotypes in Belem, Brazil: a three-year study. Ann Inst Pasteur Virol. 1988 Jan-Mar;139(1):89–99. doi: 10.1016/s0769-2617(88)80009-1. [DOI] [PubMed] [Google Scholar]
- Matsuno S., Hasegawa A., Mukoyama A., Inouye S. A candidate for a new serotype of human rotavirus. J Virol. 1985 May;54(2):623–624. doi: 10.1128/jvi.54.2.623-624.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nakagomi T., Akatani K., Ikegami N., Katsushima N., Nakagomi O. Occurrence of changes in human rotavirus serotypes with concurrent changes in genomic RNA electropherotypes. J Clin Microbiol. 1988 Dec;26(12):2586–2592. doi: 10.1128/jcm.26.12.2586-2592.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Peñaranda M. E., Cubitt W. D., Sinarachatanant P., Taylor D. N., Likanonsakul S., Saif L., Glass R. I. Group C rotavirus infections in patients with diarrhea in Thailand, Nepal, and England. J Infect Dis. 1989 Sep;160(3):392–397. doi: 10.1093/infdis/160.3.392. [DOI] [PubMed] [Google Scholar]
- Rodger S. M., Bishop R. F., Birch C., McLean B., Holmes I. H. Molecular epidemiology of human rotaviruses in Melbourne, Australia, from 1973 to 1979, as determined by electrophoresis of genome ribonucleic acid. J Clin Microbiol. 1981 Feb;13(2):272–278. doi: 10.1128/jcm.13.2.272-278.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rodger S. M., Holmes I. H. Comparison of the genomes of simian, bovine, and human rotaviruses by gel electrophoresis and detection of genomic variation among bovine isolates. J Virol. 1979 Jun;30(3):839–846. doi: 10.1128/jvi.30.3.839-846.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schnagl R. D., Rodger S. M., Holmes I. H. Variation in human rotavirus electropherotypes occurring between rotavirus gastroenteritis epidemics in central Australia. Infect Immun. 1981 Jul;33(1):17–21. doi: 10.1128/iai.33.1.17-21.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sethi S. K., Olive D. M., Strannegard O. O., al-Nakib W. Molecular epidemiology of human rotavirus infections based on genome segment variations in viral strains. J Med Virol. 1988 Nov;26(3):249–259. doi: 10.1002/jmv.1890260305. [DOI] [PubMed] [Google Scholar]
- Spencer E. G., Avendaño L. F., García B. I. Analysis of human rotavirus mixed electropherotypes. Infect Immun. 1983 Feb;39(2):569–574. doi: 10.1128/iai.39.2.569-574.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Steele A. D., Alexander J. J. Molecular epidemiology of rotavirus in black infants in South Africa. J Clin Microbiol. 1987 Dec;25(12):2384–2387. doi: 10.1128/jcm.25.12.2384-2387.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Steele A. D., Alexander J. J. The relative frequency of subgroup I and II rotaviruses in black infants in South Africa. J Med Virol. 1988 Mar;24(3):321–327. doi: 10.1002/jmv.1890240309. [DOI] [PubMed] [Google Scholar]
- Tufvesson B. Detection of a human rotavirus strain different from types 1 and 2--a new subgroup? Epidemiology of subgroups in a Swedish and an Ethiopian community. J Med Virol. 1983;12(2):111–117. doi: 10.1002/jmv.1890120205. [DOI] [PubMed] [Google Scholar]
- Uhnoo I., Svensson L. Clinical and epidemiological features of acute infantile gastroenteritis associated with human rotavirus subgroups 1 and 2. J Clin Microbiol. 1986 Mar;23(3):551–555. doi: 10.1128/jcm.23.3.551-555.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ushijima H., Kim B., Tajima T., Araki K., Yoshino K., Shinozaki T., Fujii R. Epidemiology of rotavirus infection in Tokyo during two winter seasons, as revealed by analyses of recovered viral RNA. Eur J Pediatr. 1984 Apr;142(1):71–72. doi: 10.1007/BF00442598. [DOI] [PubMed] [Google Scholar]
- Wasi C., Louisirirotchanakul S., Thakerngpol K., Satrasook S., Surakhala M., Varavithya W., Thongcharoen P. The epidemiological study on viral diarrhoea in Thailand. J Med Assoc Thai. 1984 Jul;67(7):369–375. [PubMed] [Google Scholar]
- White L., Perez I., Perez M., Urbina G., Greenberg H., Kapikian A., Flores J. Relative frequency of rotavirus subgroups 1 and 2 in Venezuelan children with gastroenteritis as assayed with monoclonal antibodies. J Clin Microbiol. 1984 Apr;19(4):516–520. doi: 10.1128/jcm.19.4.516-520.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wyatt R. G., James H. D., Jr, Pittman A. L., Hoshino Y., Greenberg H. B., Kalica A. R., Flores J., Kapikian A. Z. Direct isolation in cell culture of human rotaviruses and their characterization into four serotypes. J Clin Microbiol. 1983 Aug;18(2):310–317. doi: 10.1128/jcm.18.2.310-317.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yolken R. H., Wyatt R. G., Zissis G., Brandt C. D., Rodriguez W. J., Kim H. W., Parrott R. H., Urrutia J. J., Mata L., Greenberg H. B. Epidemiology of human rotavirus Types 1 and 2 as studied by enzyme-linked immunosorbent assay. N Engl J Med. 1978 Nov 23;299(21):1156–1161. doi: 10.1056/NEJM197811232992103. [DOI] [PubMed] [Google Scholar]