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. 1979 Aug;10(2):147–154. doi: 10.1128/jcm.10.2.147-154.1979

Nonfermentative bacilli: evaluation of three systems for identification.

L A Otto, U Blachman
PMCID: PMC273119  PMID: 389945

Abstract

Three systems for the identification of nonfermentative bacilli were evaluated for their rapidity and accuracy of identification of 217 strains. Two of the systems, API 20E (API) and Oxi/Ferm tube (OxiF), are available as kits; the oxidative attack (OA) system is not commerically available. The overall accuracies of the OA, API, and OxiF systems were 91, 69, and 50%, respectively. Identification within 48 h was achieved for 98% of the strains by OA, for 50% by API, and for 18% by OxiF. Most of the organisms that were either misidentified or not identified by API and OxiF were those nonfermentative bacilli which are relatively more fastidious or rarely encountered or both. All three systems accurately identified nonfermentative bacilli commonly isolated at Olive View Medical Center, namely, Pseudomonas aeruginosa, Acinetobacter anitratus, Pseudomonas maltophilia, Acinetobacter lwoffi, saccharolytic flavobacteria (CDC IIb), moraxellae, Pseudomonas fluorescens, and Pseudomonas putida. The OA system identified 100% of the above organisms correctly, API identified 99.4%, and OxiF identified 99.3%. Since these organisms comprise 92% of the total number of nonfermentative bacilli isolated at Olive View Medical Center, we conclude that both API and OxiF may be useful alternatives to conventional methods, based on accuracy of identification alone. These two systems were considered substantially inferior to the OA system when both accuracy and rapidity of identification were taken into account.

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Selected References

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  1. Clark W. A. A simplified Leifson flagella stain. J Clin Microbiol. 1976 Jun;3(6):632–634. doi: 10.1128/jcm.3.6.632-634.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Dowda H. Evaluation of two rapid methods for identification of commonly encountered nonfermenting or oxidase-positive, Gram-negative rods. J Clin Microbiol. 1977 Dec;6(6):605–609. doi: 10.1128/jcm.6.6.605-609.1977. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. HOWARD D. H. The preservation of bacteria by freezing in glycerol broth. J Bacteriol. 1956 May;71(5):625–625. doi: 10.1128/jb.71.5.625-625.1956. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Hofherr L., Votava H., Blazevic D. J. Comparison of three methods for identifying nonfermenting gram-negative rods. Can J Microbiol. 1978 Oct;24(10):1140–1144. doi: 10.1139/m78-186. [DOI] [PubMed] [Google Scholar]
  5. Isenberg H. D., Sampson-Scherer J. Clinical laboratory evaluation of a system approach to the recognition of nonfermentative or oxidase-producing gram-negative, rod-shaped bacteria. J Clin Microbiol. 1977 Mar;5(3):336–340. doi: 10.1128/jcm.5.3.336-340.1977. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. KING E. O., WARD M. K., RANEY D. E. Two simple media for the demonstration of pyocyanin and fluorescin. J Lab Clin Med. 1954 Aug;44(2):301–307. [PubMed] [Google Scholar]
  7. Kaltenbach C. M., Moss C. W., Weaver R. E. Cultural and biochemical characteristics and fatty acid composition of Pseudomonas diminuta and Pseudomonas vesiculare. J Clin Microbiol. 1975 Apr;1(4):339–344. doi: 10.1128/jcm.1.4.339-344.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Morris M. J., Young V. M., Moody M. R. Evaluation of a multitest system for identification of saccharolytic pseudomonads. Am J Clin Pathol. 1978 Jan;69(1):41–47. doi: 10.1093/ajcp/69.1.41. [DOI] [PubMed] [Google Scholar]
  9. Nadler H., George H., Barr J. Accuracy and reproducibility of the Oxi/Ferm system in identifying a select group of unusual gram-negative bacilli. J Clin Microbiol. 1979 Feb;9(2):180–185. doi: 10.1128/jcm.9.2.180-185.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Nord C. E., Wretlind B., Dahlbäck A. Evaluation of two test-kits--API and Oxi Ferm tube--for identification of oxidative-fermentative Gram-negative rods. Med Microbiol Immunol. 1977 Jul 18;163(2):93–97. doi: 10.1007/BF02121824. [DOI] [PubMed] [Google Scholar]
  11. Oberhofer T. R. Comparison of the API 20E and Oxi/Ferm systems in identification of nonfermentative and oxidase-positive fermentative bacteria. J Clin Microbiol. 1979 Feb;9(2):220–226. doi: 10.1128/jcm.9.2.220-226.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Oberhofer T. R., Rowen J. W., Cunningham G. F., Higbee J. W. Evaluation of the oxi/ferm tube system with selected Gram-negative bacteria. J Clin Microbiol. 1977 Dec;6(6):559–566. doi: 10.1128/jcm.6.6.559-566.1977. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Otto L. A., Deboo B. S., Capers E. L., Pickett M. J. Pseudomonas vesicularis from cervical specimens. J Clin Microbiol. 1978 Apr;7(4):341–345. doi: 10.1128/jcm.7.4.341-345.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Otto L. A., Pickett M. J. Rapid method for identification of gram-negative, nonfermentative bacilli. J Clin Microbiol. 1976 Jun;3(6):566–575. doi: 10.1128/jcm.3.6.566-575.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Pickett M. J., Pedersen M. M. Characterization of saccharolytic nonfermentative bacteria associated with man. Can J Microbiol. 1970 May;16(5):351–362. doi: 10.1139/m70-062. [DOI] [PubMed] [Google Scholar]
  16. Pickett M. J., Pedersen M. M. Nonfermentative bacilli associated with man. II. Detection and identification. Am J Clin Pathol. 1970 Aug;54(2):164–177. doi: 10.1093/ajcp/54.2.164. [DOI] [PubMed] [Google Scholar]
  17. Pickett M. J., Pedersen M. M. Salient features of nonsaccharolytic and weakly saccharolytic nonfermentative rods. Can J Microbiol. 1970 Jun;16(6):401–409. doi: 10.1139/m70-069. [DOI] [PubMed] [Google Scholar]
  18. Riley P. S., Tatum H. W., Weaver R. E. Pseudomonas putrefaciens isolates from clinical specimens. Appl Microbiol. 1972 Nov;24(5):798–800. doi: 10.1128/am.24.5.798-800.1972. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Riley P. S., Weaver R. E. Recognition of Pseudomonas pickettii in the clinical laboratory: biochemical characterization of 62 strains. J Clin Microbiol. 1975 Jan;1(1):61–64. doi: 10.1128/jcm.1.1.61-64.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Shayegani M., Lee A. M., McLynn D. M. Evaluation of the Oxi/Ferm tube system for identification of nonfermentative Gram-negative bacilli. J Clin Microbiol. 1978 Jun;7(6):533–538. doi: 10.1128/jcm.7.6.533-538.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Shayegani M., Maupin P. S., McGlynn D. M. Evaluation of the API 20E system for identification of nonfermentative Gram-negative bacteria. J Clin Microbiol. 1978 Jun;7(6):539–545. doi: 10.1128/jcm.7.6.539-545.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]

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