Abstract
Background
Erythropoiesis is a highly regulated and well-characterized developmental process responsible for providing the oxygen transport system of the body. However, few of the mechanisms involved in this process have been elucidated. Checkpoint Kinase 1 (Chk1) is best known for its role in the cell cycle and DNA damage pathways, and it has been shown to play a part in several pathways which when disrupted can lead to anemia.
Methodology/Principal Findings
Here, we show that haploinsufficiency of Chk1 results in 30% of mice developing anemia within the first year of life. The anemic Chk1+/− mice exhibit distorted spleen and bone marrow architecture, and abnormal erythroid progenitors. Furthermore, Chk1+/− erythroid progenitors exhibit an increase in spontaneous DNA damage foci and improper contractile actin ring formation resulting in aberrant enucleation during erythropoiesis. A decrease in Chk1 RNA has also been observed in patients with refractory anemia with excess blasts, further supporting a role for Chk1 in clinical anemia.
Conclusions/Significance
Clinical trials of Chk1 inhibitors are currently underway to treat cancer, and thus it will be important to track the effects of these drugs on red blood cell development over an extended period. Our results support a role for Chk1 in maintaining the balance between erythroid progenitors and enucleated erythroid cells during differentiation. We show disruptions in Chk1 levels can lead to anemia.
Introduction
In a recent study, we used microarrays to examine gene expression differences in several hematopoietic cell types and found the cell cycle regulator Checkpoint Kinase 1 homolog (Chk1) to be highly expressed in hematopoietic stem cells, T-cells, and erythroid progenitors as compared to the other cell types ( Figure 1A ) [1]. Because Chk1 deficiency has been shown previously to lead to a block in T-cell differentiation [2], we considered the possibility Chk1 may play a role in erythropoiesis. Erythroid cell development is a highly regulated multi-stage process resulting in the production of red blood cells (RBCs). Great strides in understanding this process have been made; however many aspects of the path from a hematopoietic progenitor to a mature red blood cell (RBC) remain unclear. The role of erythropoietin in early erythroid differentiation has been well studied. Erythropoietin is the best understood factor promoting erythropoiesis, and is already used in the clinical setting [3]. Yet until recently, the latter phases of erythroid development, i.e. the processes responsible for enucleation and the final stages of differentiation were poorly, if at all, characterized [4], [5], [6], [7].
A wide range of biological pathways have now been shown to contribute to the end-stages of red blood cell (RBC) development beginning with the essential role macrophages play in the enucleation process by engulfing the newly expelled nuclei [6]. Recent and innovative studies done by Ji et. al. have illustrated the roles of two Rho GTPases (Rac1 and Rac2) and mDia2 in the final steps of red blood cell development. These experiments demonstrated the consequences of failing to properly regulate actin filaments necessary for contractile actin ring (CAR) formation, which is required for erythroblast enucleation to generate mature RBCs [8]. Additional studies have shown the importance of mitochondrial autophagy in the maturation of red blood cells [4]. A role for the retinoblastoma protein (Rb) in erythropoiesis has also been demonstrated, where Rb loss causes a defect in proper RBC differentiation resulting from defects in enucleation and the biosynthesis of mitochondria [5], [9].
Chk1 is an evolutionarily conserved serine/threonine protein kinase with a known role in genome maintenance and DNA damage response. Chk1 is required for embryonic development and in adult tissues haploinsufficient phenotypes have been observed including increased DNA damage and cell cycle deregulation and has also been suggested to be a candidate tumor suppressor [10]. More recently Chk1's role has expanded into regulating Tousled-like kinases for chromatin remodeling [11], centrosome- and spindle assembly checkpoints [12], [13] and the repression of transcription of the cell cycle proteins cyclin B and Cdk1 [14], [15]. Moreover, we have shown Chk1 plays a vital role in chromosome segregation and cytokinesis durning normal cell division [16]. Thus, Chk1 acts as a critical cell cycle regulator both in the presence and absence of DNA damage.
The human homolog (CHK1) was shown recently in a stressed environment to be necessary for the monoubiquitination of FANCD2, a gene which, when mutated, results in Fanconi anaemia (FA) and is involved in the FA/BRCA pathway [17], [18]. Furthermore, Chk1 was demonstrated to be necessary for the differentiation of the chronic myelogenous leukemia cell line K562 into erythrocytes after induction with Ara-C [19]. Overall, while Chk1 is directly or indirectly involved in a diverse set of cellular processes many of its specific roles in development and cell maintenance remain to be uncovered. To determine the function of Chk1 in erythropoiesis, we took advantage of a Chk1+/− mouse (since homozygous nulls are early embryonic lethal) created by the Elledge lab [20]. Here, we demonstrate an increased incidence of anemia in the Chk1+/− mice associated with extreme splenomegaly in the affected animals. Disruption of enucleation was observed in the Chk1+/− mice, possibly resulting in an increase in erythroid progenitors to compensate. Furthermore, these Chk1+/− erythroid progenitors exhibited a marked increase in spontaneous DNA damage foci and aberrant CAR formation during RBC differentiation. Thus, this study has uncovered a new role for Chk1 during erythropoiesis and indicates that Chk1 inhibition can contribute to anemia.
Results
Chk1 haploinsufficiency disrupts cellular architecture of erythropoietic tissues
We previously used microarray gene expression analysis to identify gene expression differences throughout the hematopoietic cell system. Chk1 expression was observed in three hematopoietic populations, namely hematopoietic stem cells, activated T-cells, and erythroid progenitors ( Figure 1A ). As defects in T-cell differentiation had already been reported [2], we investigated the effects of losing a Chk1 allele on erythroid differentiation. Mice heterozygous for Chk1 exhibit lower levels of Chk1 protein in their spleens (data not shown), which in mice is a major hematopoietic organ. We observed several Chk1 heterozygous mice with splenomegaly and sudden death at ∼26 weeks of age ( Figure 1B & 1C ). Finally, when the Chk1+/− bone marrow cells were plated in Methocult supporting the growth of erythroid colonies we saw a decrease in the number of BFU-E colonies from Chk1+/− marrow compared to WT ( Figure 1D ). However, when cells were plated in Methocult supporting the growth of all hematopoietic colonies the Chk1+/− cells performed comparably to WT cells (data not shown). We were intrigued by this observation, since the Chk1+/− mice in a mixed genetic background were believed to be phenotypically normal [20]. The influence of genetic background in laboratory mouse models has a significant impact on the expected phenotype varying from its viability to behavior. Numerous studies using various mouse models have demonstrated that phenotypic noise can suppress or worsen lethal phenotypes among various genetic backgrounds. Many examples of such mouse models have been widely published such as TGF-β1 –deficient mouse models. Backcrossing of mixed background of TGF-β1-deficient mice to a C57Bl/6 background results in 100% embryonic lethality whereas in a mixed background it is only 50%. This clearly demonstrates the “modifier effect” within various genetic backgrounds in laboratory mouse models that can influence the phenotypic outcome and also variations in the penetrance of the phenotype [21].To identify the cause of the splenomegaly, we performed histopathology of spleens removed from age-matched Chk1+/− and wild type (WT) adult mice. Histologic examination of Chk1+/− spleens using hematoxylin and eosin staining revealed a range of phenotypes from a mild expansion of red pulp area to an overwhelming disruption of splenic architecture. In the most severe cases, sections of the spleen showed complete loss of normal architecture with markedly expanded red pulp and minimal white pulp. A prominent histocytic infiltrate with evidence of erythrophagocytosis is present, and numerous apoptotic bodies are identifiable ( Figure 2A ). The histocytes, or tissue macrophages, are necessary to engulf apoptotic cells or cell debris and we suspect their incursion into the hematopoietic tissue is a result of the unproductive erythropoiesis and not the cause of the anemia. We used both Ter119, a canonical erythrocyte-specific marker, and F4/80, a macrophage-specific marker, to perform immunohistochemistry on spleen tissue sections from these Chk1+/− and WT mice. A remarkable increase in both Ter119 and F4/80 positive staining was observed in the Chk1+/− spleen sections when compared to sections from WT counterparts ( Figure 2A & 2B ). In summary, affected spleens demonstrate disrupted architecture suggestive of an expanded pool of erythroid precursors with accompanying erythrophagocytosis of defective cells.
Since bone marrow serves as the primary site for red blood cell production, we also examined the bone marrow of Chk1+/− mice. Histopathology of the sternum from Chk1+/− mice showed near-complete loss of normal hematopoietic elements, replaced almost entirely by a histocytic infiltrate with morphological characteristics similar to that seen in the spleen. Scattered remaining hematopoietic elements show tri-lineage maturation ( Figure 2C ). This indicates that Chk1 haploinsufficiency can lead to serious disruptions of erythropoietic organs such as bone marrow and spleen in mice.
Chk1 haploinsufficiency causes anemia in adult mice
Since Chk1+/− mice exhibit splenic erythroid imbalance and bone marrow failure, we investigated whether Chk1 heterozygous mice developed anemia. Studies have shown that chronic erythrocyte depletion in the bone marrow and spleen can cause an impaired stress response and trigger anemia in mice [22]. To conduct these studies, we carefully monitored a large cohort of age-matched WT (n = 24) and Chk1+/− mice (n = 34) from 26 weeks of age. The cohort was subjected to complete blood count (CBC) analysis periodically to screen for anemia. Our analysis identified an approximately 30% incidence of severe anemia (decrease in RBC number and hemoglobin count) in Chk1+/− mice within 52 weeks of age as compared to no cases of anemia in WT mice over the same time period. Interestingly, while the mean cell volume (MCV) of the Chk1+/− erythroid cells was only slightly increased, the mean corpuscular hemoglobin (MCH) and mean corpuscular hemoglobin concentration (MCHC) in these cells was more than tripled indicating the development of a hyperchromic anemia. In addition, we observed significant decreases in platelet counts ( Figure 3 ). However, we did not observe a significant change in white blood cell number or differential counts between anemic Chk1+/− and WT mice. In addition, the severity of anemia did not appear to correlate with increased spleen size in all cases. These results suggest anemia as the most likely cause for the sudden death of Chk1+/− mice observed in our mouse colony.
Miscoordinated erythroid differentiation in Chk1 haploinsufficient mice
To understand why Chk1+/− mice develop anemia despite their splenic expansion and increasing erythropoiesis, we examined erythroid progenitors of anemic Chk1+/− mice and aged matched WT mice. We used immunostaining with Ter119 and CD71 to identify and quantitatively measure the erythroid progenitors in the hematopoietic tissue of anemic Chk1+/− mice ( Figure 4A ) [22], [23]. The Ter119/CD71 immunostaining identifies four cell populations during erythropoiesis, from least differentiated proerythroblasts to more differentiated orthrochromatophilic erythroblasts, and finally giving rise to reticulocytes by enucleation [22], [23]. We observed striking differences between the numbers of erythroid progenitors in the whole bone marrow of WT and anemic Chk1+/− mice. The assay revealed a significant increase in the absolute number of early erythroblasts at stage I and II compared to the WT ( Figure 4B ). However, there was no significant difference between the stage III cells of Chk1+/− and WT mice. A slight increase at stage IV Ter119high CD71low erythroblasts was also observed in Chk1+/− mice compared to WT ( Figure 4B ). In addition, we examined the Meg-Erythroid progenitor (MEP) in WT and Chk1+/− mice using established markers by flow cytometry, and found a ∼2-fold increase of these progenitors ( Figure 4B ). The increased spleen size and the decrease in the number of viable cells within the spleen may be due to a buildup of apoptotic or malformed cells awaiting engulfment by histocytes. The expansion of early erythroid progenitors and the increased cell death observed in the spleen suggests a block or miscoordination of differentiation at the early erythroblast stage in Chk1+/− mice resulting in an increased number of erythroid cells unable to progress through maturation.
Chk1+/− erythroid progenitors show a massive increase in spontaneous DNA damage foci
To understand the cause for aberrant enucleation in Chk1+/− erythroid progenitors during erythropoiesis, we used immunostaining of erythroid progenitors with well-studied DNA damage markers pγH2AX and 53BP1. Typically, the DNA damage response pathway is activated in response to DNA double strand breaks(DSBs). This leads to phosphorylation of the histone variant γH2AX by ataxia telangiectasia mutated (ATM) and Rad-3 related ATR kinases, which causes pγH2AX to localize to the site of DSBs. Several other mediator proteins in the DNA damage response pathway such as e.g. MDC1, 53BP1, and BRCA1, are also phosphorylated by ATM/ATR and recruited to the sites of DNA damage [24]. Thus, a complex of damage sensing and repair proteins are assembled at the site of DNA strand breaks to initiate DNA repair and cell cycle arrest through the activation of downstream checkpoint kinases [25].
Previous studies from our laboratory, demonstrated that proliferating mammary epithelial cells in a conditional Chk1 heterozygous mouse model showed miscoordinated cell cycle events and spontaneous DNA damage foci formation [10]. Since mammalian erythropoiesis involves proliferation, chromatin changes, and cell-cycle exit to initiate terminal differentiation to mature RBCs, we hypothesized that Chk1+/− erythroblasts also might accumulate DNA damage during RBC differentiation. As expected, we observed co-localization of pγH2AX and 53BP1 at the site of DNA damage foci in the nucleus of all the four Chk1+/− erythroid populations, from least differentiated stage I to more differentiated stage IV erythroblasts isolated from the bone marrow of young non-anemic Chk1+/− mice ( Figure 5 , Table 1 ). Thus, a marked increase in DNA damage foci was observed in both proliferating and differentiating Chk1+/− erythroid progenitors during erythropoiesis, whereas WT erythroid cells did not display DNA damage foci. These results demonstrate that haploinsufficiency of Chk1 in the proliferating erythroblasts resulted in the accumulation of DNA damage, which possibly caused a block or miscoordinated erythroid differentiation and fewer mature red blood cells.
Table 1. Chk1+/− erythroid cells exhibit DNA damage foci.
Genotype | Erythroid Stage | Foci/Cells | % Cells with Foci |
Wt | I | 1/201 | 0.5 |
II | 0/205 | 0.0 | |
III | 2/200 | 1.0 | |
IV | 3/210 | 1.4 | |
Foci/Cells | % Cells with Foci | ||
Chk1+/− | I | 199/200 | 99.5 |
II | 200/201 | 99.5 | |
III | 191/209 | 91.4 | |
IV | 187/200 | 93.5 |
Erythroid cells (Stages I–IV) were isolated via FACS and stained with the DNA damage markers pγH2AX and 53BP1. At least 200 cells per stage were then examined for the formation of DNA damage foci and WT and Chk1+/− mice were then compared. A significant increase in DNA damage foci was observed in the Chk1+/− cells (student's t-test. p<0.001).
Erythroid progenitors undergo abnormal enucleation during erythropoiesis in Chk1 haploinsufficient mice
To further investigate the misregulation of erythroid differentiation, we took advantage of a previously developed technique to study enucleation [6]. Briefly, hematopoietic cells are stained with two DNA dyes, one that is impermeable to cell membranes and another which can pass through membranes. Then flow cytometry is used to separate out nucleated cells (only stained by the cell-permeable dye), and enucleated cells (unstained). In our studies, cells were not only examined by size, but by Ter-119 positivity before examining their enucleation status ( Figure 6A ). The P1 gated (small) cells should almost entirely consist of RBCs with most cells being enucleated and a few cells having their nucleus. The P2 gated (large) cells should be immature erythrocytes with their nuclei still intact. We examined young (10 weeks old) non-anemic mice to discover if a disruption in erythroid differentiation could be observed before anemia occurred in these mice.
Surprisingly upon examining the P1 gated cells, the young and non-anemic Chk1+/− mice exhibited a decrease in enucleated cells, and an increase in nucleated cells as compared to WT mice. The P2 gated Chk1+/− cells showed a significant decrease in nucleated cells and an increase in enucleated cells ( Figure 6B ). The increase in inappropriately large enucleated erythroid cells and the decrease in small properly enucleated cells in the Chk1+/− mice support the idea of miscoordinated erythroid differentiation. In the Chk1+/− mice, a failure of the erythroid progenitors to successfully and appropriately eject their nuclei may result in an influx of histiocytes to dispose of the failed cells.
Chk1+/− erythroid progenitors fail to enucleate during erythropoiesis due to improper CAR formation
The results from the enucleation assay also revealed that Chk1+/− erythroid progenitors failed to properly eject their nucleus during the enucleation process. Mammalian erythroid cells enucleate via asymmetric cell division involving extrusion of the condensed nucleus enclosed within a plasma membrane. Numerous studies show that asymmetric cell division in mammals involves cytokinetic components, wherein formation of contractile actin ring at the midbody provides the required momentum for abscission of dividing daughter cells [26]. Past studies have shown that actin filaments also play a critical role in the formation of contractile actin ring (CAR) at the boundary of the cytoplasm of budding reticulocyte and nucleus of enucleating cell [27]. Recent studies have shown CAR formation is indispensable for enucleation and Chk1 appears to interact with the cytokinetic machinery responsible for separating cells during cell division [8], [16], [28].
Therefore, to examine the kinetics and dynamics of actin filaments during CAR formation as shown by Ji et al., we immunostained the four populations of young Chk1+/− and WT erythroid cells during erythropoiesis with fluorescently labeled Phallodin, an actin binding protein. Interestingly, we observed aberrant CAR formation in the Chk1+/− erythroid cells at stage IV as compared to the CAR observed at stage IV in WT erythroid cells. Moreover, the least differentiated proerythroblasts of Chk1+/− mice at stage I also displayed less intense actin staining as compared to the stage I proerythroblasts from WT mice ( Figure 6C , Table 2 ). Therefore, these results provide an explanation for the abnormal increase of nucleated P1 gated Chk1+/− erythroid cells as compared to WT observed using the enucleation assay. Thus, these results demonstrate that Chk1 haploinsufficiency may result in improper CAR formation, presumably leading to unsuccessful enculeation during erythropoiesis.
Table 2. Chk1+/− show defective CAR formation.
Total Cells per type | Wt Cells w/defective CAR | Chk1+/− Cells w/defective CAR | Fischer's Exact test | |
Stage I | 300 | 0 | 10 | P = 0.0017 |
Stage IV | 300 | 4 | 59 | P<0.0001 |
Total | 600 | 4 | 69 | P<0.0001 |
Erythroid cells (Stage I and IV) were examined for defective CAR formation by immunohistiochemistry. Significant differences were calculated by Fisher's exact test.
Chk1 expression in human erythroid progenitors and clinical anemia
To determine whether Chk1 was also expressed in human erythroid precursors, we obtained cDNA from each stage of erythroid development isolated from human bone marrow and used real time PCR to examine the levels of Chk1 expression. We found Chk1 to be highly expressed in stage I progenitors when compared to stage IV cells, and to steadily decrease as the cells differentiated ( Figure 7A ). A similar pattern of expression was observed in the mouse erythroid progenitors (data not shown). Finally, we wanted to determine if a decrease in Chk1 expression has previously been observed in human anemias. For this we did an in silico search for Chk1 expression in anemias by using GEO Profiles (http://www.ncbi.nlm.nih.gov/geo/). When we examined Chk1 expression in this data set, we found it significantly decreased in patients suffering from myelodysplastic syndromes with refractory anemia with blasts [29] ( Figure 7B ). These data indicate a possible role for CHK1 in human erythropoiesis and as a contributor to clinical anemias.
Discussion
The results presented here show that Chk1 plays a role in red blood cell formation. A loss of one Chk1 allele greatly increases the chances of developing anemia in mice and illustrates the importance of maintaining the correct levels of Chk1 in erythroid progenitor cells. Moreover, a decrease in Chk1 RNA has been observed in patients with refractory anemia with excess blasts, further supporting an important role for Chk1 status in clinical anemia [29]. Anemia can occur due to excessive blood loss, death of blood cells, or ineffective blood cell production [30]. Our findings support a role for Chk1 haploinsufficiency in the latter method of anemia induction.
In many ways the phenotype of the Chk1+/− erythroid cells are reminiscent of the erythroid-specific retinoblastoma protein (Rb) knockout cells. This mouse model shows an increase in Ter119+ CD71high cells and a decrease in enucleated cells [5], [9], [31], similar to our Chk1 mutant mice. However, in the erythroid-specific Rb−/− mice, their spleens show an expansion of the red pulp, but not the complete breakdown of splenic architecture observed in the more severely affected Chk1+/− mice. In addition, erythroid-specific Rb−/− cells exhibited severe micronucleation and DNA damage, thus affecting enucleation during erythropoiesis [32]. Similarly, we have also observed a marked increase in spontaneous DNA damage foci formation shown by co-localization of DNA damage markers pH2AX and 53BP1 in the nucleus of proliferating and differentiating Chk1+/− erythroblasts during erythropoiesis. These studies support the idea that critical cell cycle regulators and checkpoint proteins such as Rb and Chk1 also play a role in erythroblast enucleation to generate terminally differentiated mature RBCs. Inappropriate expression or regulation of these cell cycle regulators may have a severe impact on the condensing chromatin and cell cycle status of maturing erythroblasts.
Apoptosis has been shown to play a key role in erythropoiesis and Chk1 has recently been shown to be cleaved by caspases resulting in a hyperactive form of Chk1 [33], [34]. Caspases have been shown to play key roles in the balance between cell death and fully differentiated red blood cells during erythropoiesis [7], [35]. Furthermore, when siRNA against caspase-3 was expressed in CD34+ progenitor cells, they failed to differentiate into reticulocytes at the same rate as cells transfected with a control siRNA [35] resulting in an increase in the early stage erythroid cells. This phenotype is very similar to what we see in the Chk1+/− mice, making this another attractive pathway for future studies.
Finally, studies have shown that erythroid cells evict their nucleus via asymmetric cytokinesis and apparently healthy Chk1+/− mice already have small but significant disruptions in their ability to properly enucleate erythroid cells ( Figure 6B ). Our results indicate that improper CAR formation in Chk1+/− erythroid cells during late stages of erythropoiesis, provides one of the explanations for unsuccessful enucleation. It is possible that inappropriate regulation of pathways controlling cytokinesis caused by decreased Chk1 levels might contribute to the improper enucleation of the erythroid cells. The increase in hematopoietic stress of the Chk1+/− mice likely leads to signals being sent to the hematopoietic progenitors to increase the number of MEPs in an attempt to compensate for the reduction of normal RBCs. This in turn may increase the amount of failed erythroid cells in the Chk1+/− mice possibly resulting in anemia and an even greater influx of histiocytes, which ultimately take over the hematopoietic tissues. Future studies will be required to determine if interactions between Chk1 and the recently identified adaptor protein mDia2 during CAR formation play any role in enucleation during erythropoiesis.
Ultimately, apparently healthy Chk1+/− mice have small but significant disruptions in their ability to properly produce RBCs, as well as additional defects (Figure S1), yet only 30% of Chk1+/− mice develop anemia. This suggests the existence of a compensatory mechanism that allows the majority of mice to escape full blown anemia. However, not all mice can fully exploit this mechanism, and in these cases yet undefined additional insults to the hematopoietic progenitors appear to occur leading to an unrecoverable defect. Disruptions of DNA repair caused by the decreased dose of Chk1 could easily lead to additional “hits” in the genome resulting in frank anemia [10]. Thus, we believe Chk1 haploinsufficiency causes a slight defect in normal erythropoiesis and in the presence of stress. e.g. such as infection, this defect is exacerbated, leading to anemia. Many of Chk1's wide-ranging roles in cellular functions can either directly or indirectly affect proteins and processes already shown to play key roles in erythropoiesis, and it is most likely a combinatorial effect of deficiencies, which individually may exert a relatively minor phenotype, yet together result in anemia in 30% of these mice. Elucidation of the role Chk1 plays in erythropoiesis may lead to a better understanding of its possible role in clinically relevant anemias, and will be important in designing therapeutic studies in cancer patients using the new generation of Chk1 inhibitors entering clinical trials.
Materials and Methods
Mouse colony and aging study
Previously published Chk1+/− mice [20] on a mixed genetic background C57Bl/6×129Sv/J were back-crossed for six generations with C57Bl/6 mice (Harlan). Genotyping was carried out by PCR, using mouse tail DNA and specific primers designed against the Chk1 WT and null allele. The presence of Chk1 null allele was confirmed by using a primer set against the neomycin gene of the following sequence, NeoF (5′-GAT CGG CCA TTG AAC AAG ATG G-3′) and NeoR (5′-CCT GAT GCT CTT CGT CCA GAT C-3′), respectively.
For the aging study, a large cohort of age-matched Chk1+/− and WT mice were pooled at 26 weeks of age and a complete blood count (CBC) was carried out periodically, approximately every 4 weeks. Mice were bled retro-orbitally with EDTA hand-coated capillary tubes and 60 µL of blood was obtained. CBCs were then carried out with either an Abbott Cell-Dyn 3500 or a Drew Scientific Hemavet 950. The mice were sacrificed with an end point of either 52 weeks of age or when they developed anemia (an RBC count below normal range). Mice used for all these studies were euthanized according to IACUC approved animal protocol guidelines.
Flow cytometry of erythroid progenitors
Whole bone marrow and spleen was isolated, made into single cell suspensions, and counted with a Vi-Cell (Beckman Coulter) and trypan blue exclusion was used to calculate viability. Cells were taken to a concentration of 100 million cells per mL. They were then stained on ice with various antibody cocktails to identify each progenitor compartment as previously described [22], [36] (all antibodies were obtained from BD PharMingen, San Diego, CA and used at a concentration of 1∶100 unless otherwise indicated). MEP were stained with biotin Lineage markers (gr-1, ter-119, CD4, CD8, CD3, B220, CD19), IL7ra PE-Cy7 (eBioscience), Sca-1 FITC, and cKit PE, CD34 Alexa Fluora 647(at 1∶50)(eBioscience), and CD16/32 Alexa Fluor 700 (at 1∶50)(eBioscience) for 20 min. Cells were then spun down, resuspended, and stained with strepavidin-Pacific Blue(1∶50) for 20 min. Stage I–IV erythroid cells were stained with Ter-119-APC and CD71-PE for 20 min. Finally, cells were then spun down, resuspended in a propidium iodide solution and analysis was accomplished on live cells with an LSRII (Becton Dickinson, Franklin Lakes, NJ).
Human erythroid progenitors were isolated in a fashion similar to mouse cells, however glycophorin A was used instead of Ter-119 since there is no known human Ter-119. Ter-119 is associated with cell surface glycophorin A, a well-known erythroid marker for humans, making it a reasonable substitute [37].
Tissue preparation and immunohistochemistry
Spleen and sternum from Chk1 heterozygous and WT adult mice were isolated and fixed overnight in 4% paraformaldehyde (PFA) and stored in 70% ethanol at 4°C before subjecting to further processing. The specimens were paraffin-embedded and 5 µm serial sections were cut on Probe on Plus slides (Fisher Scientific). For histology, these sections were deparaffinized with xylene, and rehydrated with varying concentration of ethanol. This was followed by hematoxylin staining for 5 min and a quick rinse in acid ethanol. Finally, the sections were immersed in eosin stain for 45 sec and then dehydrated with ethanol and xylene overnight. They were mounted with Permount and air-dried completely before imaging under Zeiss Axioplan II upright microscope.
For immunohistochemistry, similar deparaffinization was performed with xylene and ethanol and followed by heat-induced antigen retrieval using 10 mM sodium citrate by boiling for 20 min. All washes were performed with 1× PBS throughout the procedure unless otherwise stated. Sections were then incubated with the respective antibodies Ter119 (1∶2000) or F4/80 (1∶10,000) in 5% BSA and 0.5% blocking buffer. Sections were washed and incubated with anti-mouse (Oncogene Research) or anti-rat (Oncogene Research) secondary antibodies diluted 1∶1000 in 5% BSA and 0.5% blocking buffer for 1 hour at RT. Vectastain Elite ABC and diaminobenzidine (DAB) substrate kits were used to detect immunoperoxidase staining according to the manufacturer's instructions (Vector Laboratories). Slides were counterstained with hematoxylin for 30 sec, dehydrated, and mounted using Permount. The sections were air-dried completely and imaged using a Zeiss Axioplan II upright microscope. All pictures were scaled to size for figures with Adobe Illustrator.
Immunostaining and microscopy
After isolation by FACS, erythroid cells from Chk1+/− and WT mice bone marrow were applied on to the slides by placing a drop of 10,000 cells on each slide and allowing them to air dry to the slide. The cells were fixed with 4%PFA, permeabilized with 0.5% Triton X-100 and incubated with 5% goat serum (Sigma, St. Louis, MO) mixed with primary antibody at dilutions of anti-pγH2AX (Upstate, CA) 1∶500 and anti-53BP1(Bethyl laboratories, CA) at 4C overnight. All the cells were washed 3 times with 1× PBS for 10 min and incubated with 5% goat serum mixed with respective fluorochrome-conjugated secondary antibodies or Alexa flour 594 Phalloidin(Invitrogen) at 1∶1500 for 1 hr at RT. Cells are washed 5 times for 15 min and counterstained with Vectashield 4,6-diamidino-2-phenylindole (DAPI) to visualize DNA. Microscopic analysis was performed using an Olympus BX50 Fluoresence microscope (Applied Precision, Washington) at 60× magnification using 2×2 bin and images were processed using Spot software and Adobe Photoshop.
Erythroid Colony Formation
Whole bone marrow (WBM) was collected from WT and Chk1+/− mice and 100,000 WBM cells were plated onto Methocult M3436 (Stem Cell Technologies), which drives and supports formation of BFU-E and CFU-E colonies only, in six well plates. Six days after plating cells, colonies were counted and typed.
Real-Time PCR
RNA was isolated from 1×105 cells (except for HSCs which was from 2.5–5×104 cells), using the RNAqeuous kit (Ambion, Austin, TX, USA), treated with DNAseI, and precipitated with phenol∶chloroform∶isoamyl alcohol. RNA was quantified using a Nanodrop and 30 ng of RNA was used for each RT-PCR reaction. RT-PCR was performed with Superscript II (Invitrogen). Taqman master mix and CHK1 taqman probe (Applied Biosystems) was used for the real-time PCR reactions and 18s was used as an internal control. All reactions were run on an ABI prism 7900HT according to manufacturer's protocol (Applied Biosystems).
Enucleation Assay
Whole bone marrow cells were isolated, made into single cell suspensions, and stained on ice with Ter119-APC (BD PharMingen, San Diego, CA (1∶100)) for 20 min. Cells were then spun down and resuspended with 10 µM Syto16 (Invitrogen) and 8 µM Sytox Blue (Invitrogen) in HBBS with 10% FBS. Cells were allowed to sit at room temperature for 20 min; they were then analyzed with an LSRII (Becton Dickinson, Franklin Lakes, NJ).
Data Mining
An in silico search for Chk1 expression in anemias by using GEO Profiles (http://www.ncbi.nlm.nih.gov/geo/). GEO DataSets were searched for the key words anemia and human via the NCBI website. The results were further filtered to select for studies using hematopoietic progenitors and examining types of anemia. Studies utilizing samples from transplant patients, cancer patients, or malaria patients were discarded. Finally, the normalized expression data from the GEO profile was shown and a Z-test was used to test for differences.
Statistical Analysis
All statistical analyses was carried out with GraphPad Prism version 5.00 (GraphPad Software, San Diego California USA, www.graphpad.com). The incidence curve was plotted by the Kaplan-Meier method and the p value was calculated by the log-rank (Mantel-Cox) test. All other p values reported are derived by a student's t-test unless otherwise indicated. Microsoft Excel was used for the performance of Z-test.
Supporting Information
Acknowledgments
We thank Shirley Small for helping us with excellent animal care of our anemic Chk1+/− mice during the entire course of this project and preparation of this manuscript. We thank Dr.Melissa Boles for helping with the CBC analysis, Dr.Yi Li and Dr.Eric Chang for sharing pγH2AX and Alexa Flour 594-Phalloidin antibodies respectively.
Footnotes
Competing Interests: The authors have declared that no competing interests exist.
Funding: National Institutes of Health CA16303(JMR), DK58192 (MAG), HL08100 (MAG), Department of Defense Biomedical Research Commercialization Program W81XWH-06-1-0305 (SP), and the Ellison foundation (AGSS178706 to MAG). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
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