Abstract
Emerging evidence indicate novel modes of EGFR signaling, notably, one involves EGFR nuclear translocalization and subsequent gene activation. To date, however, the significance of the nuclear EGFR pathway in glioblastoma (GBM) is unknown. Here, we report that EGFR and its constitutively activated variant EGFRvIII undergo nuclear translocalization in GBM cells, in which the former event requires EGF stimulation and the latter is constitutive. To gain insight into the impact of nuclear EGFR on gene expression in GBM, we created isogenic GBM cell lines, namely, U87MG-vector, U87MG-EGFR and U87MG-EGFRdNLS that, respectively, express the control vector, EGFR and nuclear-entry defective EGFR with a deletion of the nuclear localization signal (NLS). Microarray analysis shows that 19 genes, including, cyclooxygenase-2 (COX-2), to be activated in U87MG-EGFR cells but not in U87MG-EGFRdNLS and U87MG-vector cells. Subsequent validation studies indicate that COX-2 gene is expressed at higher levels in cells with EGFR and EGFRvIII than those with EGFRdNLS and EGFRvIIIdNLS. Nuclear EGFR and its transcriptional co-factor STAT3 associate with the COX-2 promoter. Increased expression of EGFR/EGFRvIII and activated STAT3 leads to synergistic activation of the COX-2 promoter. Promoter mutational analysis identified a proximal STAT3-binding site that is required for EGFR/EGFRvIII-STAT3 mediated COX-2 gene activation. In GBM tumors, an association exists between levels of COX-2, EGFR/EGFRvIII and activated STAT3. Together, these findings indicate the existence of the nuclear EGFR/EGFRvIII signaling pathway in GBM and its functional interaction with STAT3 to activate COX-2 gene expression, thus linking EGFR-STAT3 and EGFRvIII-STAT3 signaling axes to pro-inflammatory COX-2 mediated pathway.
Keywords: EGFR, EGFRvIII, STAT3, COX-2, glioma, transcriptional regulation
Introduction
Over-expression of EGFR and/or its constitutively activated variant EGFRvIII is frequently found in glioblastoma (GBM), the most common and most malignant form of brain cancer, and is associated with tumorigenesis and more aggressive tumor phenotypes, such as, invasiveness and therapeutic resistance (1-3). EGFRvIII, a product of rearrangement of the EGFR gene with a deletion within the extracellular domain that is predominantly found in GBM, is more tumorigenic than wild-type EGFR (4, 5). Importantly, both EGFR- and EGFRvIII-mediated pathways are of a high biological complexity, including the existence of two major signaling modes, at the cell-surface and the other, in the nucleus (2, 6, 7).
In the cell-surface signaling mode, both EGFR and EGFRvIII function as receptor tyrosine kinases that activate signaling modules, such as, those mediated by PLC-γ, Ras, PI-3K and JAK2, that can contribute to tumorigenesis and more aggressive tumor behaviors (8, 9). On the other hand, signals such as EGFR ligands, oxidative stress and DNA damage stimulate EGFR nuclear transport (2). Nuclear EGFR is localized on the inner nuclear membrane (10, 11) and in the nucleoplasm (12-15). In the nuclear signaling mode, EGFR has three key functions: (1) gene transactivation, (2) tyrosine kinase and (3) protein-protein interactions (13, 15-19). Importantly, the level of nuclear EGFR predicts poor prognosis in patients with breast carcinomas (19), oropharyngeal and esophageal squamous cell carcinomas (19, 20) and ovarian cancer (21). Although nuclear detection of EGFR has been reported in highly proliferative normal tissues, such as, regenerating livers (22) and placenta (13), and in cancerous tissues (13, 19-21), its presence in GBM remains uninvestigated. A previous report showed that EGFRvIII is detected in the nucleus of normal glial cells and primary GBM specimens (23).
Nuclear EGFR, similar to HER2, activates gene expression via its transactivation domain (13, 24). Although EGFR lacks a DNA-binding domain, it has been shown to interact with DNA-binding transcription factors, such as, STAT3, E2F1 and STAT5, to induce expression of genes, including, inducible nitric oxide synthase (iNOS), B-Myb and aurora A, respectively, in breast cancer (15, 17, 25). A systemic approach has, however, yet been conducted to identify nuclear EGFR target genes. Knowledge of such genes will advance our understanding of the nature and impact of nuclear EGFR on cell physiology, provide novel insights into the role of nuclear EGFR in human cancers, and help clarify some of the molecular mechanisms underlying the observed association between nuclear EGFR and poor clinical outcome (19-21).
EGFR physically interacts and functionally cooperates with STAT3, at both cytoplasmic and nuclear levels. At the cytoplasmic level, via the two docking autophosphorylated tyrosines (Y1068 and Y1086), cell-surface EGFR interacts with STAT3 SH2 domain (26). This interaction leads to phosphorylation of STAT3 at Y705 and its activation. Cell-surface EGFRvIII also interacts with and phosphorylates STAT3. Importantly, we and others showed in cancers of breast, colon and skin that cell-surface EGFR cooperates with STAT3 to induce expression of TWIST (to facilitate epithelial-mesenchymal transition), VEGF (to promote angiogenesis) and Eme1 endonuclease (to reduce drug-induced DNA damage)(27-29). In primary breast carcinomas, co-expression of EGFR and activated STAT3 (Y705) is frequent, 39% (28). In primary GBMs, we found approximately one third of the tumors to concurrently express EGFR/EGFRvIII and activated STAT3-Y705 (30). At the nuclear level, EGFR interacts with STAT3 to activate expression of iNOS gene in carcinomas of breast and epidermoid (15).
The objectives of this current study, therefore, are to determine whether nuclear EGFR- and EGFRvIII- pathways are functional in human GBM and to identify the target genes of these pathways in GBM via an unbiased comprehensive approach. Our findings provide the evidence showing that GBM cell lines and primary specimens express nuclear EGFR/EGFRvIII. We also identified cyclooxygenase-2, COX-2, as a novel transcriptional target of the EGFR-STAT3 and EGFRvIII-STAT3 signaling axes and that nuclear EGFR/EGFRvIII is essential for COX-2 gene activation in GBM cells. COX-2 catalyzes the first step in the biosynthesis of the prostaglandins from arachidonic acid and plays a central role in the regulation of progression, invasiveness and angiogenesis of various cancers, including, gliomas (31). COX-2 inhibition has been shown to effectively target glioma xenografts (32) and consequently, COX-2 is an emerging target for anti-GBM therapy (33). Together, the findings shed light on the nature of the nuclear EGFR/EGFRvIII pathway in GBM and establish a novel link between the nuclear EGFR/EGFRvIII-STAT3 signaling pathways and COX-2-mediated inflammatory pathway in GBM.
Results
EGFR undergoes nuclear translocalization in human GBM cell lines and primary specimens
Using nuclear fractionation and western blotting, we showed that following EGF treatment, EGFR undergoes nuclear translocalization in human GBM T98G cells that express high levels of endogenous EGFR (Fig. 1A). Nuclear fractionation efficiency is indicated by the lack of cytoplasmic β-actin protein in the nuclear extracts (NE) and by the absence of the nuclear marker protein lamin B, in the non-nuclear extracts (NNE).
Similarly, in U87MG-EGFR stable transfectant cells, EGFR undergoes EGF-induced nuclear transport (Fig. 1B). U87MG-EGFR cells express equivalent levels of EGFR, compared to GBM cells with endogenous EGFR. EGF-induced EGFR nuclear translocalization in T98G cells was confirmed using immunofluorescence staining/confocal microscopy (Fig. S1 in Supplementary Data). The punctate staining pattern for nuclear EGFR, shown in Fig. S1, is consistent with what have been reported by many previous studies (18, 34). Nuclear HER2 aslo displays similar punctate staining rather than diffuse staining (35). To determine the presence of endogenous nuclear EGFR in GBM tumors, we analyzed 12 primary GBM specimens for EGFR expression using immunohistochemistry (IHC) with an antibody that is reactive to both EGFR and EGFRvIII. Six of the GBM tumors expressed EGFR/EGFRvIII with one of them showing significant levels of nuclear EGFR/EGFRvIII. In Fig. 1C, the solid arrows point to the brown-stained EGFR-positive nuclei and the dashed arrows to the blue EGFR-negative nuclei. Corroborating this observation, our earlier study found 6.9% (9/130) of primary breast carcinomas to express high levels of nuclear EGFR (19).
Given the facts that EGFR heterodimerizes with HER2 (8) and that HER2 undergoes nuclear translocalization (35), we examined whether nuclear EGFR and nuclear HER2 complex as heterodimers. Using T98G GBM cells know to express both EGFR and HER2, we immunoprecipitated nuclear EGFR using an EGFR antibody and subjected the immunoprecipitates to western blotting to detect HER2. As shown in Fig. 1D (left panel), we did not detect any HER2 signal despite nuclear EGFR was effectively immunoprecipitated by the EGFR antibody. As expected, IgG did not pull down EGFR or HER2, indicating specificity. Interestingly, HER2 underwent a modest level of nuclear translocalization after EGF stimulation, albeit the majority of the HER2 protein is in the non-nuclear fraction (Fig. 1D-right panel). Since we did not detect nuclear EGFR-HER2 heterodimers, EGF-induced HER2 nuclear transport may potentially be a result of nuclear transport of Her-3. This is supported by the facts that EGFR can transactivate HER3 (36), HER3 undergoes nuclear transport (37) and that HER2 is a preferred binding partner of HER3. Together, our results demonstrate for the first time that EGFR undergoes nuclear translocalization in human GBM cells and primary specimens.
Generation of GBM cells stably expressing mutant EGFR defective in nuclear entry
To gain insight into the nature of the nuclear EGFR pathway in GBM, we generated isogenic GBM cell lines that expressed a) wild-type EGFR and b) mutant EGFR, defective in its ability to translocate to the cell nucleus. For this, we engineered an EGFRdNLS mutant construct that carries the nuclear entry-defective mutant EGFR with a deletion of eight amino acids (aa 645-652) within the nuclear localization signal (NLS) region (Fig. 2A). Amino acid substitutions of the basic residues within this NLS region have been shown to abolish the ability of EGFR to enter the nucleus (15, 38). We subsequently established a U87MG stable transfectant line, U87MG-EGFRdNLS, to express EGFRdNLS. As indicated in Fig. 2B, U87MG-EGFRdNLS and U87MG-EGFR isogenic lines express equivalent levels of the respective EGF receptors. As expected, cells expressing EGFRdNLS did not contain nuclear EGFR, as shown by immunofluorescence staining/confocal microscopy (Fig. S2 in Supplementary Data) and nuclear fractionation/western blotting (Fig. 2C). In nuclear fractionation/western blotting analysis (Fig. 2C), nuclear fractionation efficiency is indicated by the absence of cytoplasmic β-actin protein in NE and by the lack of the nuclear protein lamin B in NNE.
To demonstrate that EGFRdNLS retains its receptor tyrosine kinase function, we showed that EGFRdNLS undergoes EGF-induced autophosphorylation similar to EGFR (Fig. 2D). Using cells treated with the protein synthesis inhibitor, cycloheximide, we showed that the deletion within the NLS region did not alter the half-life/stability of EGFR (Fig. 2E). Importantly, results of colony formation assays (Fig. 2F) indicate that EGFRdNLS renders U87MG cells significantly less efficient in forming colonies in the absence (first and second panels) and presence of soft agar (third and fourth panels). U87MG-vector cells formed loose colonies in these assays. It is also noticeable that U87MG-EGFR cells formed larger colonies compared to U87MG-EGFRdNLS cells in the presence of soft agar (high-resolution images in Fig. 2F-fourth panel), suggesting that nuclear EGFR is important for the anchorage-independent growth of EGFR-expressing GBM cells. Taken together, these results demonstrate the utility of the isogenic U87MG-vector, U87MG-EGFR and U87MG-EGFRdNLS cell lines for subsequent gene expression profiling to identify nuclear EGFR target genes in human GBM cells.
The human COX-2 gene is a candidate nuclear EGFR target gene
We reason that nuclear EGFR target genes are regulated by EGFR but not by EGFRdNLS. Thus, microarray was performed to determine the expression levels of a number of human gene transcripts in the three isogenic U87MG-EGFR, U87MG-EGFRdNLS and U87MG-vector cell lines. In each of the three experiments, tumor cells were serum-starved for 24 hrs, treated without and with EGF for 4 hrs, total RNA extracted and submitted for microarray analysis. Data were analyzed by a data analyst in the Duke Microarray Facility. Here, we identified 19 genes that were significantly induced by EGF in U87MG-EGFR cells (Fig. 3A and Supplementary Table I; p<0.05), but not in U87MG-vector or U87MG-EGFRdNLS cells. Interestingly, COX-2 (arrow) is one of the potential nuclear EGFR target genes (Fig. 3A). Given the long-standing interest of our laboratory in pro-inflammatory pathways, we directed our validation effort at COX-2. The EGF-induced expression of COX-2 transcripts in U87MG-EGFR cells but not in U87MG-EGFRdNLS or U87MG-vector cells was confirmed by quantitative RT-PCR (Fig. 3B) and by regular RT-PCR and western blotting (Fig. 3C-left panel). Consistent with the microarray results, EGF significantly induced expression of COX-2 transcripts and protein in U87MG-EGFR cells but not in U87MG-vector or U87MG-EGFRdNLS cells (Fig. 3C-right panel). Consistent with the elevated transcript and protein levels, we showed the COX-2 promoter to be significantly activated by EGF in U87MG-EGFR cells but not in U87MG-vector or U87MG-EGFRdNLS cells (Fig. 3D). Conversely, EGFR kinase inhibitor Iressa suppressed the ability of EGF to induce COX-2 expression, as shown by RT-PCR (Fig. 3E-left panel) and to activate the COX-2 promoter (right panel) in U87MG-EGFR cells. These results indicate that the human COX-2 gene is a candidate nuclear EGFR target gene.
EGFRvIII undergoes nuclear translocalization and activates the human COX-2 gene in GBM cells
Because endogenous EGFRvIII expression is not maintained in vitro, we used U87MG-EGFRvIII stable transfectants in these studies. Here, we found that EGFRvIII is constitutively detected in the nucleus of U87MG-EGFRvIII cells (Fig. 4A-left panel). Importantly, U87MG-EGFRvIII xenografts expressed similar levels of EGFRvIII compared to GBM xenografts with endogenous EGFRvIII (D-256 MG and D-270 MG; Fig. 4A-right panel), indicating that U87MG-EGFRvIII cells express physiological levels of EGFRvIII. To examine the role of nuclear EGFRvIII in COX-2 gene regulation, we created EGFRvIIIdNLS mutant that is defective in nuclear entry and established stable U87MG transfectants that express this mutant. As shown by Fig. 4B, U87MG-EGFRvIII and U87MG-EGFRvIIIdNLS cells expressed equivalent levels of EGFRvIII (left panel) and importantly, EGFRvIIIdNLS was absent from the nucleus (right panel). Using cycloheximide-treated cells, we showed that EGFRvIII and EGFRvIIIdNLS proteins have similar half-lives (Fig. 4C), indicating that the deletion of the NLS sequence did not affect receptor stability. In contrast to the observation in Fig. 2F, U87MG-EGFRvIIIdNLS cells formed colonies to the extent similar to U87MG-EGFRvIII cells (Fig. S3 in Supplementary Data). We further showed, using RT-PCR (Fig. 4D, top panel) and western blotting (Fig. 4D bottom panel), that COX-2 gene expression is significantly higher in U87MG-EGFRvIII cells than U87MG-EGFRvIIIdNLS and U87MG-vector cells.
Nuclear EGFR-mediated activation of the human COX-2 gene is enhanced by STAT3
Although nuclear EGFR is known to have transactivational activity, it does not directly associate with DNA, and thus requires cooperation with DNA-binding transcription factors to regulate gene expression (13, 15). In previous studies, we showed that nuclear EGFR associates with STAT3 to induce iNOS gene expression (15). Similarly, nuclear EGFRvIII-STAT3 complex was shown to be present in glial cells and to be involved in their malignant transformation (23). Against this background, we examined whether nuclear EGFR and EGFRvIII cooperate with STAT3 to induce COX-2 gene expression in GBM cells. Using intracellular protein-DNA binding ChIP assay, we showed that nuclear EGFR and nuclear STAT3 associate with the COX-2 gene promoter and that the association was dependent on EGF stimulation (Fig. 5A). Fig. 5B shows that COX-2 promoter activity was modestly enhanced by EGFR alone and STAT3CA alone but significantly increased by the combination of EGFR and STAT3CA. STAT3CA is a constitutively activated STAT3 variant with two Cys substitutions that enable STAT3 molecules to dimerize spontaneously without phosphorylation at Y705 (39). Since STAT3CA is constitutively activated independent of EGF stimulation, we found EGF to modestly enhance (1.3-fold) the ability of EGFR and STAT3CA co-expression to activate the COX-2 promoter (data not shown). Similar to wild-type EGFR, the COX-2 promoter was also activated by EGFRvIII (Fig. 5C). Unlike the robust activation by the EGFR-STAT3CA combination, STAT3CA only modestly enhanced EGFRvIII-mediated activation of the COX-2 gene promoter. Consistent with these observations, EGFRdNLS-STAT3CA co-transfection had lower effects on the COX-2 promoter than the EGFR-STAT3CA combination (Fig. 5D), further providing evidence of an important role for nuclear EGFR in the activation of the COX-2 promoter by STAT3. EGFRvIIIdNLS-STAT3CA co-transfection activated COX-2 promoter similar to that observed for the EGFRvIII-STAT3CA combination. These findings are in line with several studies reporting that EGFRvIII preferentially activates the PI-3K/Akt signaling axis over the STAT3 and Ras/MAPK downstream signaling modules (40, 41).
To further investigate the structural requirement in the COX-2 promoter for EGFR/STAT3-mediated activation, we analyzed the human COX-2 promoter for consensus STAT3 binding motifs, 5′-TT-N(4-6)-AA-3′, using a web-based search engine, TFSearch (http://www.cbrc.jp/research/db/TFSEARCH.html), as we previously described (15, 42). The results of the search showed two putative STAT3 binding sites within the human COX-2 promoter (Fig. 5E-top panel). We mutated each motif by substituting two nucleotides and such that the TT-AA palindrome was disrupted. Using these mutant reporter constructs, we showed that mutations within the proximal STAT3-binding motif (motif A), but not in motif B, significantly decreased the ability of EGFR-STAT3CA and EGFRvIII-STAT3CA co-transfections to activate the COX-2 promoter (Fig. 5E). Collectively, the results summarized in Fig. 5 indicate that STAT3 cooperates with both EGFR and EGFRvIII to activate the COX-2 gene promoter, with the former more active than the latter.
Increased COX-2 expression is associated with EGFR/EGFRvIII and activated STAT3 in primary GBM specimens and xenografts
To determine the potential clinical relevance of the association between COX-2 and EGFR/EGFRvIII-STAT3, we examined 12 primary specimens of malignant gliomas and three GBM xenografts for the expression of COX-2, EGFR and p-STAT3 (Y705) via IHC. The results showed that 58.3% (7/12) of the primary malignant gliomas co-expressed EGFR and COX-2 and that levels of EGFR correlate with those of COX-2, as indicated by Chi-square analysis (p=0.03). In the three GBM xenografts we analyzed, we found COX-2 to be expressed at a higher level in the EGFR/EGFRvIII-positive, p-STAT3-positive U87MG-EGFR (data not shown) and D-256 MG GBM xenografts but not in U87MG xenografts, which have very low levels of EGFR and p-STAT3 (Fig. 6A). We further examined whether p-STAT3-expressing GBM cells express COX-2 using double fluorescence staining-coupled IHC. In these studies, p-STAT3 is indicated by red fluorescence and COX-2, by green fluorescence. Tumor nuclei were stained by DAPI (blue). As indicated by Fig. 6B, the majority of p-STAT3-positive nuclei (pink signals as merged products of red and blue fluorescence) in the D-256 MG xenograft expressed high levels of COX-2. Those cells with p-STAT3-positive nuclei but did not express COX-2 can potentially be due to the expression of a transcription repressor of COX-2. Noticeably, COX-2 is also expressed in cells without significant p-STAT3 expression, suggesting that factors other than STAT3 may account for COX-2 gene expression in these cells.
Discussion
Although over-expression of EGFR and EGFRvIII is a well-known characteristic of many human cancers, our understanding of EGFR- and EGFRvIII-associated tumor biology remains insufficient, which is likely due to the high degree of biological complexity that lies within these pathways (43). This is, in part, indicated by emerging evidence showing the ability of EGFR and EGFRvIII to undergo nuclear translocalization and in the cell nucleus, to regulate gene expression. To date, however, it is unknown whether the nuclear EGFR and EGFRvIII pathways are functional in GBM cells. In this study, we provide evidence that, for the first time, the nuclear EGFR and EGFRvIII pathways are functional in human GBM cells, the most common and deadliest brain malignancy in adults. Using an unbiased approach to identify genes that are targeted specifically by nuclear EGFR, but not by the cell-surface counterpart, we identified COX-2 as a nuclear EGFR target. Consistent with the known ability of nuclear EGFR to physically and functionally associate with STAT3 transcription factor, we found the nuclear EGFR-STAT3 signaling axis to transcriptionally activate the COX-2 gene in GBM cells. Collectively, these data provide a novel link between nuclear EGFR/EGFRvIII-mediated mitogenic pathway and the COX-2-associated inflammatory pathways in GBM.
COX-2 plays a central role in many important cellular processes, including, inflammatory response, tumorigenesis and tumor progression (31). Several studies have shown that EGFR and COX-2 are co-overexpressed in cutaneous squamous cell carcinoma (44) and lung adenocarcinoma (45). EGF has been shown to induce COX-2 expression through PI-3K, p38 and protein kinase C-δ (46, 47), albeit the exact transcriptional pathway that mediates the transcriptional activation of COX-2 was not determined under these conditions. Interestingly, a previous report showed that nuclear HER2 binds to and activates the human COX-2 gene promoter, leading to its transcriptional activation in breast cancer cells (35). The identified HER2 associated sequence (HAS) is a 20-bp element located at -1750 to -1731 bps of the human COX-2 promoter (35). Since the COX-2 reporter construct used in this study contains up to -1 kb of the COX-2 promoter, the observed EGF- and EGFR-induced COX-2 promoter activation (Figs. 3D-E, 5B) is independent of HER2 or HAS. Our co-immunoprecipitation results indicate that nuclear EGFR does not complex with nuclear HER2 in GBM cells analyzed, further supporting the notion of nuclear EGFR-dependent and nuclear HER2-independent activation of the COX-2 gene expression in GBM cells. Furthermore, our results indicate that nuclear EGFR and activated STAT3 cooperate synergistically to activate the COX-2 gene activity. This synergy may not apply to nuclear HER2-mediated COX-2 gene activation, given the fact that the HAS motif (5′-ATAAACTTCAAATTTCAGTA-3′) does not appear to contain a putative STAT3 binding site (TT-N(4-6)-AA-3′) and STAT3 is therefore unlikely to activate the COX-2 promoter through binding to HAS. The results of the present study combined with those of the study by Wang et al (35), together, unraveled an important link between the ErbB family of receptor tyrosine kinases, their nuclear translocalization and COX-2-mediated pro-inflammatory pathway.
To date, only four nuclear EGFR-targeted genes, namely, cyclin D1, iNOS, B-Myb and Aurora A, have been reported (13, 15, 17, 25). The identification and validation of the COX-2 gene as an additional transcriptional target of the nuclear EGFR and nuclear EGFRvIII pathways and the evidence that this activation of COX-2 by nuclear EGFR/EGFRvIII occurs in GBM cells growing in vitro and in vivo are significant. Unlike these previous studies, the current undertook an unbiased comprehensive approach to identify nuclear EGFR target genes using tumors expressing wild-type versus genetically modified EGFR molecules. Although we focused on COX-2 in this study, it is important to note that other genes have been identified in the microarray analysis. Ongoing studies are directed at these genes to gain further insight into their role in the malignant biology of tumors with active nuclear EGFR and EGFRvIII pathways.
STAT3 is highly activated in many human cancers, including, malignant gliomas (30, 48) and cancers of the breast and the head and neck (49, 50). Similar to increased COX-2 expression, STAT3 activation is associated with inflammation, more malignant tumor phenotype and poor prognosis (51, 52). Consequently, STAT3 and COX-2 both have emerged as targets for anti-GBM therapy (30, 53). The findings in this study linking STAT3 and COX-2 should contribute to a better understanding of their role in nuclear EGFR signaling-associated malignant biology.
Given that GBMs expressing EGFRvIII or activated EGFR are more refractory to therapy in comparison to those without EGFR activation, the findings could provide, potentially, the basis for novel combination therapies that simultaneously target EGFR/EGFRvIII and COX-2. Indeed, in pre-clinical and clinical studies, combination of inhibitors of EGFR and COX-2 have yielded promising results in advanced cutaneous squamous cell carcinoma, NSCLC, intestinal cancer and prostate cancer (44, 54-56). In summary, the results reported in this study define the COX-2 gene as a novel transcriptional target of the nuclear EGFR-STAT3 and EGFRvIII-STAT3 signaling axes and provide new insight into the malignant biology of a subpopulation of human tumors with concurrently activated EGFR/EGFRvIII and STAT3 pathways. They also provide a potential rationale for combination therapy targeting EGFR/EGFRvIII, STAT3 and COX-2 pathways.
Materials and Methods
Cell Lines, Primary Gliomas, Xenografts and Reagents
Human GBM cell lines U87MG and T98G were from ATCC (Manassas, VA) whereas MGR3 cells were established in our laboratory from primary specimens. These cells were maintained in DMEM with 10% fetal calf serum. U87MG-vector, U87MG-EGFR and U87MG-EGFRvIII stable transfectant lines were previously established from the parental U87MG cells that express a very low level of EGFR (30). The stable transfectant cell lines were cultured in DMEM with 10% fetal calf serum and 1 mg/ml G418. GBM xenografts established in the flanks of nude mice were provided by the Preston Robert Tisch Brain Tumor Center at Duke University. Primary GBM specimens were obtained from Preston Robert Tisch Brain Tumor Center at Duke University and Imgenex (San Diego, CA). All chemicals were purchased from Sigma (St. Louis, MO) unless otherwise stated. Rabbit polyclonal anti-EGFR antibody used in western blotting was purchased from Santa Cruz Biotech. (sc-03). The EGFR, EGFRvIII and STAT3CA expression vectors were generated in our laboratory (30) and expressed as Myc-tagged fusion proteins. Anti-Myc mouse monoclonal antibody used in immunofluorescence staining and confocal microscopy was purchased from Roche (Indianapolis, IN). Anti-lamin B mouse monoclonal antibody was from Calbiochem (San Diego, CA). β-actin and α-tubulin antibodies were obtained from Sigma. Rabbit polyclonal HER2 (29D8), p-EGFR (Y1068), p-STAT3 (Y705) and COX-2 antibodies were purchased from Cell Signaling (Danvers, MA).
Detection of Nuclear EGFR/EGFRvIII via Nuclear Fractionation and Western Blotting
This was performed as previously described (15). Cells treated per experimental procedures were collected, washed with PBS, and swelled in hypotonic buffer (25 mM Tris-HCl, pH 7.5, 5 mM KCl, 0.5 mM dithiothreitol, 1 mM PMSF and 0.15 m/ml aprotinin) for 20 min on ice. Following homogenization using a Dounce homogenizer, nuclei were pelleted and washed. To extract nuclear proteins from the isolated nuclei, we used an ultrasonic disruption step and sonication buffer containing 50 mM Tris-HCl and 0.15 m/ml aprotinin. To isolate non-nuclear extracts, the supernatant was exposed to 1% SDS and 0.1 % NP-40, centrifuged at 15,000g to remove cell debris and the resulting supernatant collected. Western blotting was conducted as previously described (30).
Immunohistochemical Staining of Primary Malignant Glioma Specimens for EGFR, Activated STAT3 and COX-2
The immunoperoxidase staining method used in these studies was a modification of the avidin-biotin complex technique, as described previously (30). Paraffin-embedded microsections (5 uM) of GBM primary specimens and xenografts were deparaffinized, dehydrated, and subjected to antigen retrieval in a microwave oven followed by incubation with 0.05% trypsin in PBS for 15 min at room temperature. Endogenous peroxidase activity was blocked by treatment of 0.3% hydrogen peroxide. The slides were incubated with 10% normal goat serum for 30 min and then with the EGFR mouse monoclonal antibody (1:50; Novocastra RTU-EGFR-384), COX-2 (1:25; Cell Signaling) and p-STAT3-Y705 (1:30; Cell Signaling) rabbit polyclonal antibodies at 4°C overnight. Following washes with PBS, the slides were incubated with biotinylated secondary antibodies and then with avidin-biotin-horseradish peroxidase complex. Detection was performed using 0.125% aminoethylcarbazole chromogen. After counterstaining with Mayer's hematoxylin (Sigma), the sides were mounted. Scoring was performed by a pathologist. H scores (histologic scores) for EGFR and COX-2 were computed from both % positivity (A%, A=1-100) and intensity (B=0-3) using the equation, H Score=A × B, according to a well-established IHC scoring system (30, 57).
Determination of Binding of Nuclear EGFR to Nuclear HER2 via Immunoprecipitation and Western Blotting
T98G cells treated without and with EGF (100 ng/ml) for 15 min were harvested and fractionated into nuclear and non-nuclear fractions. Nuclear extracts were subjected to immunoprecipitation and western blotting, in which the lysates were incubated with 1 μg anti-EGFR mouse monoclonal antibody (Ab-13, Neomarker) or control mouse IgG at 4°C overnight with gentle agitation (15). Following addition of protein G-agarose and incubation for 30 min at 4°C, protein G-agarose pellets were collected and washed for multiple cycles at 4°C. The washed immunoprecipitates were subjected to SDS-PAGE and western blotting, as described previously (58). Both nuclear and non-nuclear extracts were subjected to western blotting to detect levels of EGFR, HER2, lamin B (nuclear protein) and β-actin (cytoplasmic protein).
Plasmids, Transfection and Generation of NLS-deleted EGFR and NLS-deleted EGFRvIII Constructs and Stable Transfectants
The EGFR and EGFRvIII expression vectors, pCMV-Tag5A-EGFR and pCMV-Tag5A-EGFRvIII, were previously generated in our laboratory (30). To establish NLS-deleted EGFR and EGFRvIII, we first PCR amplified the N-terminal regions of EGFR (codons -24 to +644) and EGFRvIII (codons -24 to +377) by PCR, using a forward primer with the Hind III site: 5′-ATTAAGCTTCCACCATGCG ACCCTCCGGGA-3′ and a reverse primer with the Xba I site: 5′-TAATCTAGACATGAAGAG GCCGATCCC-3′. The PCR products were restricted with Hind III and Xba I and subcloned into compatible ends of pCMV-Tag5A plasmid (Stratagene). To create the C-terminal fragments of EGFR (codons +653 to +1186) and EGFRvIII (codons +378 to +919) fragments, we performed PCR with primers with sequences: 5′-TAATCTAGAACGCTGCGGAGGCTGCTG-3′ (forward primer with the Xba I site) and 5′-TAGGCTGGAGTGCT CCAATAAATTCACT-3′ (reverse primer with the Xho I site). To enable subcloning, a Ser codon was inserted at the 5′-end of the C-terminal fragments. The C-terminal fragments were restricted using Xba I and Xho I enzymes and ligated into the compatible ends of plasmids with the N-terminal EGFR/EGFRvIII. The resulting plasmids were designated as pCMV-Tag5A-EGFRdNLS and pCMV-Tag5A-EGFRvIIIdNLS, that encode EGFR and EGFRvIII receptors with a deletion of eight amino acids (aa 645-652 in EGFR) within the NLS region (see Fig. 2A). All transfections were performed with cells in exponential growth using FuGENE HD (Roche). Generation of stable transfectants was performed as previously described (30).
Determination of the Half-life of EGFR/EGFRvIII and Their Nuclear Entry-defective Mutants
Tumor cells exposed to 10 ug/ml cycloheximide for 0, 30, 60, 120 and 180 mins were harvested, total protein extracted and subjected to western blotting. A Myc-tagged mouse monoclonal antibody (Roche) was used to detect Myc-tagged EGFR, EGFRdNLS, EGFRvIII and EGFRvIIIdNLS fusion proteins.
Determination of Anchorage-independent Growth by the Clonogenic Growth Assays
Clonogenic growth assays were performed in 6-well cell culture plates with 1000 cells seeded per well, as previously described (15). For the experiments with soft agar, wells were pre-coated with 0.5% agarose as the bottom layer. The top layer contained cells in 0.3% agarose. Following 10-14 days, colonies were stained with crystal violet blue solution (Sigma) for 1 hr and counted. Triplicate wells were used for each cell line and three independent experiments were performed.
Identification of Nuclear EGFR Target Genes by GeneChip DNA Microarray
Total RNA extracted from the three U87MG stable transfectant lines, U87MG-vector, U87MG-EGFR and U87MG-EGFRdNLS, were used to examine their gene expression profile. This was conducted in the DNA Microarray Core Facility of Duke Institute of Genome Science & Policy using the human Genome U133 Plus 2.0 Array genechips (Affymetrix, Santa Clara, CA) containing over 47,000 gene transcripts. ANOVA was conducted to determine statistical significance.
Reverse Transcription-PCR (RT-PCR) and Quantitative PCR
Total RNA isolation and RT were conducted using the SV Total RNA Isolation System (Promega). RT-qPCR was performed in the Mx3005P qPCR System (Stratagene) using the SuperScript III platinum SYBR green one-step qRT-PCR system (Invitrogen), in which GAPDH gene was used as normalization controls. All experiments were in triplicate. Primer sequences were 5′-TTAATGAGTACCGCAAACGC-3′ and 5′-ACCAGAAGGGCAGGATACAG-3′ (COX-2) and 5′-ACTGCCAACGTGTCAGTGGT-3′ and 5′-GTGTCGCTGTTGAAGTCAGA-3′ (GAPDH). For standard RT-PCR, Superscript II First-Strand cDNA synthesis system (Invitrogen), was used and PCR performed with forward and reverse primers of 5′-TGTATGAGTGTGGGATTTGACC-3′ and 5′- GTGATCTGGATGTCAACACAT-3′ (COX-2) and 5′-GGCGGCACCACCATGTACCC-3′ and 5′-AGGGGCCGGACTCGTCATACT-3′ (β-actin).
Determination of COX-2 Promoter Activity by Mammalian Transfection of Reporter Vector and Luciferase Assay
The COX-2 reporter construct, pCOX-2-Luc, was purchased from Panomics (Fremont, CA) and contains a 1 kb human COX-2 promoter 5′ of the firefly luciferase reporter gene. A Renilla luciferase expression vector, pRL-CMV whose expression is controlled by the CMV promoter was used to control for transfection efficiency. Forty-eight hrs after transfection, the cells were lysed and luciferase activity measured using the Dual Luciferase Assay Kit in a TD 20/20 luminometer (Promega), as previously described (15). Relative luciferase activity was calculated by normalization of the firefly luciferase activity against that of the Renilla luciferase.
Chromatin Immunoprecipitation (ChIP) Assay to Measure Binding of Nuclear EGFR-STAT3 to the COX-2 Promoter
ChIP was performed using a ChIP Assay Kit (Upstate, Billerica, MA) as we described previously (15). An anti-EGFR mouse monoclonal antibody (Neomarkers) and an anti-STAT3 rabbit polyclonal antibody (Santa Cruz, C-20) were used in these experiments. Sequences of the primers for amplifying the COX-2 promoter are 5′-GGCTTACGCAATTTTTTTAAGGGGA -3′ (forward) and 5′-TGGTCGCTAACC GAGAGAACCTTCC-3′ (reverse). Control IgGs were used as negative controls for immunoprecipitation. Chromatin input was used as loading control for PCR.
Generation of Mutant COX-2 Promoter Reporters via Site-directed Mutagenesis
Site-directed mutagenesis was performed using QuikChange Mutagenesis Kit (Stratagene), according to the manufacturer's instructions. The pCOX-2-Luc luciferase reporter construct was used as the template. Sequences of the primers used to mutate the COX-2 promoter are 5′-CGGGCTTACGCGC TTTTTTTAAGGG-3′ and 5′-CCCTTAAAAAAAGCGCGTAAGCCCG-3′ (pCOX-2-A-Luc) and 5′-CCCGCCTCTCTGGCCAAGAAACAAG-3′ and 5′-CTTGTTTCTTGGCCAGAGAGGCGGG-3′ (pCOX-2-B-Luc).
Determination of p-STAT3 and COX-2 Co-expression via Double Immunofluorescence Staining-coupled IHC
Paraffin-embedded tumor sections were deparaffinized and subjected to epitope retrieval. The sections were blocked with 5% normal goat serum and 5% normal horse serum, and incubated with a mixture of the anti-p-STAT3 rabbit polyclonal antibody (1:50, Cell Signaling) and anti-COX-2 mouse monoclonal antibody (1:50, Santa Cruz) overnight at 4°C. After several washes, the sections were incubated with Texas red-conjugated goat anti-rabbit and fluoresin-conjugated horse anti-mouse secondary antibodies (1:200, Vector Lab). After mounted with VECTASHIELD Mounting Medium with DAPI (Vector Lab), the sections were examined under a Zeiss Axioskop2 plus fluorescence microscope.
Statistical Analysis
ANOVA, Chi-square analysis, Student t-test and regression analysis were performed using STATISTICA (StatSoft Inc., Tulsa, OK) and Microsoft Excel, as we previously described (30, 58)
Supplementary Material
Acknowledgments
This study was supported by NIH grant, K01-CA118423, and the Pediatric Brain Tumor Foundation (to H.-W. L).
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