Abstract
Background
Developing methods for protecting organisms in metal-polluted environments is contingent upon our understanding of cellular detoxification mechanisms. In this regard, half-molecule ATP-binding cassette (ABC) transporters of the HMT-1 subfamily are required for cadmium (Cd) detoxification. HMTs have conserved structural architecture that distinguishes them from other ABC transporters and allows the identification of homologs in genomes of different species including humans. We recently discovered that HMT-1 from the simple, unicellular organism, Schizosaccharomyces pombe, SpHMT1, acts independently of phytochelatin synthase (PCS) and detoxifies Cd, but not other heavy metals. Whether HMTs from multicellular organisms confer tolerance only to Cd or also to other heavy metals is not known.
Methodology/Principal Findings
Using molecular genetics approaches and functional in vivo assays we showed that HMT-1 from a multicellular organism, Caenorhabditis elegans, functions distinctly from its S. pombe counterpart in that in addition to Cd it confers tolerance to arsenic (As) and copper (Cu) while acting independently of pcs-1. Further investigation of hmt-1 and pcs-1 revealed that these genes are expressed in different cell types, supporting the notion that hmt-1 and pcs-1 operate in distinct detoxification pathways. Interestingly, pcs-1 and hmt-1 are co-expressed in highly endocytic C. elegans cells with unknown function, the coelomocytes. By analyzing heavy metal and oxidative stress sensitivities of the coelomocyte-deficient C. elegans strain we discovered that coelomocytes are essential mainly for detoxification of heavy metals, but not of oxidative stress, a by-product of heavy metal toxicity.
Conclusions/Significance
We established that HMT-1 from the multicellular organism confers tolerance to multiple heavy metals and is expressed in liver-like cells, the coelomocytes, as well as head neurons and intestinal cells, which are cell types that are affected by heavy metal poisoning in humans. We also showed that coelomocytes are involved in detoxification of heavy metals. Therefore, the HMT-1-dependent detoxification pathway and coelomocytes of C. elegans emerge as novel models for studies of heavy metal-promoted diseases.
Introduction
Heavy metals are metallic elements with densities exceeding 5 g/cm3. Some heavy metals (e.g. copper [Cu], zinc [Zn] and iron [Fe]) at low concentrations serve as micronutrients, but are toxic when in excess [1], [2]. Nonessential heavy metals and metalloids (e.g. cadmium [Cd], arsenic [As] and mercury [Hg]) are toxic even at low concentrations [2]–[4]. The chronic exposure of humans to heavy metals either from occupational hazard, or from food and air, leads to their accumulation in tissues and causes various diseases, including neurodegenerative conditions, dysfunction of vital organs, and cancer [2]–[6]. Therefore, developing methods for protecting and detoxifying organisms in metal-polluted environments is contingent on our understanding of the effective cellular detoxification mechanisms.
In this regard, half-molecule ATP-binding cassette (ABC) transporters of the HMT-1 subfamily (heavy metal tolerance factor 1) and phytochelatin (PC) synthases, (γ-glutamylcysteinyltransferases; EC 2.3.2.15), are acutely required for detoxification of Cd [7]–[14]. It was suggested that HMTs act after PCSs by sequestering Cd coordinated to products of PCS-1 activity, phytochelatins (PC) into the vacuole, a lysosomal-like compartment of plant and fungi cells [15]. Our genetic studies in C. elegans, however, have shown that pcs-1 and hmt-1 do not act in a linear metal detoxification pathway [8]. These observations were further supported by our biochemical studies in S. pombe showing that SpHMT1 is not a primary Cd·PC transporter, and that an HMT-1 from Drosophila, an organism that lacks PC synthase homologs in its genome, is involved in Cd detoxification [16]. Furthermore, Preveral et al., also observed that SpHMT1 confers Cd tolerance in a PC-independent manner [17]. Interestingly, of heavy metals tested, SpHMT1 conferred tolerance only to Cd, but not to As, Cu, Hg, Ag and Sb [16], [17].
Here, we tested if HMT-1 from the multicellular organism, C. elegans, would confer tolerance only to Cd, or unlike SpHMT1, to other heavy metals as well. Since C. elegans has highly differentiated muscular, nervous, digestive and reproductive systems, and yet is comprised of only 959 optically transparent somatic cells, we determined the spatial distribution of hmt-1 expression and related it to the expression pattern of its homolog in humans.
We established that unlike SpHMT1, CeHMT-1 conferred tolerance to As and Cu in addition to Cd. Consistent with the notion that pcs-1 and hmt-1 operate in distinct metal detoxification pathways, double pcs-1;hmt-1 mutant worms were more sensitive to these metals than single pcs-1 or hmt-1 knock-out worms. In addition, hmt-1 and pcs-1 were expressed in distinct tissues, but co-expressed in coelomocytes, which are cells that are distributed in the pseudocoelom (body cavity) of C. elegans [18]. The latter finding was intriguing because the biological role of coelomocytes in C. elegans is not known [18]. However, because coelomocytes actively and continuously endocytose fluid and macromolecules from the pseudocoelom and because the pseudocoelomic fluid serves as the circulatory system for nutrients that are secreted into the pseudocoelom by the intestinal cells, it has been suggested that coelomocytes may act as liver cells by reprocessing and detoxifying pseudocoelomic fluid from harmful ingested substances [18], [19]. Since pcs-1 and hmt-1 function in detoxification of heavy metals and are also co-expressed in coelomocytes, we hypothesized that coelomocytes may be needed for heavy metal detoxification. By testing heavy metal sensitivity of a coelomocyte-deficient, NP717, strain, we uncovered the essential role of these cells in the detoxification of Cd, As and Cu. Since the coelomocytes deficiency did not increase the sensitivity of worms to hydrogen peroxide, we concluded that these cell types detoxify heavy metals, but not the oxidative stress, a consequence of many stresses as well as heavy metal toxicity. We also showed that although hmt-1 may function in coelomocytes, it acts mainly outside these cell types in metal detoxification.
Given that the HMT-1 counterparts in mammals, HsABCB6 and RnABCB6, are involved in homeostasis of the essential heavy metal Fe or confer tolerance to Cu, respectively, and that HsABCB6 is expressed in similar tissues in humans as HMT-1 in C. elegans [20]–[22], the HMT-1-dependent metal detoxification pathway of C. elegans emerges as a novel model for studies of heavy metal-related diseases, such as neurodegenerative conditions similar to Parkinson's disease, dysfunction of digestive tract, and cancer [1], [2], [5], [6].
Results and Discussion
Analyses of hmt-1 Deletion Alleles of C. elegans
Previous reverse genetic studies of hmt-1 and pcs-1 in C. elegans relied on expression knockdown by RNAi [7], [8]. Here, we used hmt-1 deletion alleles, gk155 and gk161, and pcs-1(tm1748) allele. At the onset of our studies, we determined the position of deletions by sequencing gDNAs isolated from hmt-1(gk155), hmt-1(gk161) and pcs-1(tm1748) worms.
Sequencing analysis revealed that hmt-1(gk155) has a 416 bp deletion, encompassing the 1st exon and part of the 1st intron (Figure 1A). An in-frame start codon is present downstream of the deletion breakpoint, at the beginning of the 2nd exon. RT-PCR analysis disclosed the presence of a truncated transcript (data not shown), therefore, a truncated, Mr 87,900, polypeptide lacking two cytosolic loops and a transmembrane domain of the NTE (N-terminal extension) could be generated in hmt-1(gk155) (Figure 1A). Nevertheless, given that the NTE is necessary for the activity of some full-molecule ABC transporters, we suspect that even if a truncated polypeptide were generated in this mutant allele, it would not be functional [23], [24]. Consistent with this suggestion, we established that although hmt-1(gk155) worms were indistinguishable from the wild type worms in a medium devoid of heavy metal, they were hypersensitive to Cd (Figure. 1C).
Allele gk161 is a 2149 bp deletion of the 5th, 6th and 7th exons (Figure 1A). PCR analysis using oligos that are specific for the internal part of the deletion verified that the deleted region is absent (data not shown). Sequencing analysis established that the transcriptional fusion of the 4th and 8th exons introduced a premature stop codon. Therefore, if a translated truncated polypeptide (Mr 22,800) were stable, it would lack the TMD and NBD. These domains, however, are essential for ABC transporters function [25]. Therefore, we suggested that gk161 is a null allele of hmt-1. Consistent with this suggestion, hmt-1(gk161) worms were hypersensitive to Cd (Figure 1C; Table S1).
We did not find significant differences in the sensitivity of gk155 and gk161 alleles to Cd (Figure 1C; Table S1). Since the HMT-1 polypeptide of gk161 allele lacked TMD and NBD that are required for the function of ABC transporters, we used this strain in our studies.
Analyses of pcs-1 Deletion Alleles of C. elegans
Sequencing analysis of gDNA from pcs-1(tm1748) worms revealed a 588 bp deletion and 3 bp insertion that have led to the removal of a part of the 5′ untranslated region and exons 1 and 2 of the predicted splice variant PCS-1a, or a part of 5′ untranslated region and exon 1 of the predicted splice variant PCS-1b (Figure 1B). An in-frame start codon is present downstream of the deletion breakpoint, at the beginning of the 3rd exon in PCS-1a (or 2nd, in PCS-1b) that generated a stable transcript (data not shown). Nevertheless, if a truncated 35 kDa polypeptide in this allele were stable, it would not be functional since the deletion removed an essential Cys57 residue of the catalytic triad that is located in the conserved N-terminal part of PC synthases (Figure 1B, [26]–[28]). Consistent with this suggestion was finding that pcs-1(tm1748) worms were hypersensitive to Cd (Figure 1C; Table S1). Furthermore, a comparison of concentrations at which pcs-1(tm1748) and hmt-1(gk161) worms were able to reach adult stage after 4 days of culturing disclosed that pcs-1(tm1748) worms were much more sensitive to Cd than hmt-1(gk161) worms (Figure 1C; Table S1).
Finally, pcs-1(tm1748) worms failed to accumulate PC when cultured in medium supplemented with Cd. Reverse-phase HPLC analysis of non-protein thiols in lysates from Cd-cultured wild-type N2 worms revealed prominent peaks whose migration properties were indistinguishable from those of PC2, PC3 and PC4 standards (Figure 1D). The aggregate content of PC-thiols in N2 worms was 17 nmol/mg protein. In contrast, the content of PC-related thiols in lysates from Cd-cultured pcs-1(tm1748) worms was below the limit of detection (not shown).
Based on the position of the deletion, the acute hypersensitivity of pcs-1(tm1748) worms to Cd and their failure to synthesize PCs, we concluded that tm1748 is a null allele of pcs-1.
In Addition to Cd, CeHMT-1 Confers Tolerance to As and Cu
Previous studies showed that SpHMT1 confers tolerance only to Cd [16], [17]. To determine if CeHMT-1 is involved in detoxification of other heavy metals, we tested the sensitivity of hmt-1(gk161) worms to As and Cu. In doing so we established that unlike SpHMT1, CeHMT-1 conferred tolerance to As and Cu in addition to Cd (Figure 2, Tables S2, S3). Indeed, hmt-1(gk161) worms were 1.6- and 5-fold more sensitive to the lowest (800 µM) and highest (2000 µM) concentrations of As than wild-type worms were (Figure 2A, Table S2).
Increasing concentrations of Cu, also affected the development of hmt-1(gk161) worms (Figure 2C, Table S3). At 200 µM of Cu, 92.4±2.76% of N2 worms reached the adult stage, whereas only 73.8±6.9% of hmt-1(gk161) worms were adults. At the highest concentration of Cu (300 µM), 80.5±4.35% of wild-type worms have reached the adult stage, whereas only 67.2±5.3% of hmt-1(gk161) worms were adults (Figure 2C, Table S3). Comparison between the percentage of hmt1(gk161) worms that have reached the adult stage in the medium with highest concentrations of As or Cu revealed that hmt-1(gk161) worms were 3.8-fold more sensitive to As than to Cu (Tables S2, S3).
It is noteworthy that the HMT-1 homolog from a mammal, RnABCB6, confers tolerance to Cu as well [22]. These data, along with our results showing that unlike SpHMT-1, CeHMT-1 confers tolerance to multiple heavy metals and that HMT1 of S. pombe groups separately from HMTs of C. elegans and mammals in the HMT-1 subcluster when their polypeptide sequences are subjected to phylogenetic analysis [16], suggest that the function of HMTs in multicellular organisms have diverged from SpHMT1.
PCS-1 Is Also Required for Detoxification of Arsenic and Copper
PCS-1 of C. elegans confers Cd tolerance by catalyzing synthesis of heavy metal-binding Cys-rich peptides, phytochelatins (Figure 1D, [7], [29]). Since PCSs of S. pombe and Arabidopsis confer tolerance to multiple heavy metals [12]–[14], [30], we hypothesized that in addition to Cd, CePCS-1 would confer tolerance to other heavy metals too. As predicted, pcs-1(tm1748) worms were hypersensitive not only to Cd, but also to As and Cu (Figure 2A–C, Tables S2, S3).
Similar to Cd (Figure 1C), pcs-1(tm1748) mutant worms were more sensitive to As and Cu compared to hmt-1(gk161) mutants (Figure 2A, B, Tables S2, S3). Based on the percentage of worms that have reached the adult stage in the medium where heavy metals left N2 worms unaffected (As [1000 µM] or Cu [200 µM]), pcs-1(tm1748) worms were 1.3-fold more sensitive to As and 2-fold more sensitive to Cu than hmt-1(gk161) and 2- and 1.2-fold more sensitive than N2 worms.
Arsenic Affects Viability of Worms
To determine whether chronic exposure to Cd, As or Cu affects the viability of worms that have reached adult stage after 4 days of culturing, we analyzed them after an additional 24 h (corresponding to 5 days of culturing in the presence of heavy metals). Chronic exposure of wild-type, pcs-1(tm1748) and hmt-1(gk161) mutants to Cd or Cu did not affect the viability of worms that have reached adult stage (not shown). However, the viability of adult worms in the medium with As was significantly affected (Figure 2B, Table S2). When the viability of worms was compared at the highest used concentration of As (2000 µM), hmt-1(gk161) and pcs-1(tm1748) worms were 3.8- and 4.5-fold more sensitive respectively than N2 worms.
pcs-1 and hmt-1 Do Not Act in a Linear Pathway in Detoxification of As or Cu
We previously showed that hmt-1 and pcs-1 do not act in concert to detoxify Cd [8], [16]. To determine if they would share the same or distinct pathways in detoxifying As and Cu, we compared heavy metal sensitivity of single and double knockout animals. Our expectation was that if hmt-1 acts in a distinct pathway in detoxifying As and/or Cu, its loss-of-function in conjunction with pcs-1 may increase Cd hypersensitivity of hmt-1 mutants (i.e. due to additive effects of two compromised detoxification pathways). On the other hand, if hmt-1 acts in the same pathway as pcs-1, heavy metal hypersensitivity may not increase.
Our studies showed that a double pcs-1(tm1748);hmt-1(gk161) knockout was more sensitive to As and Cu than single pcs-1(tm1748) or hmt-1(gk161) knockouts regardless whether worms were scored as a number of individuals that have reached the adult stage, or as the number of adults that have died in the medium with As (Figure 2A–C). When scored as the percentage of worms that have reached the adult stage in the medium with the lowest concentration of As (800 µM), pcs-1(tm1748);hmt-1(gk161) worms were 1.2-, 1.4- and 1.8-fold more sensitive than hmt-1(gk161), pcs-1(tm1748), or N2 worms respectively. When scored as the percentage of worms that have reached the adult stage when cultured in the medium with the lowest concentration of Cu (100 µM), pcs-1(tm1748);hmt-1(gk161) worms were 1.6-, 1.7-, and 1.8-fold more sensitive than pcs-1(tm1748), hmt-1(gk161) or N2 worms respectively.
These data are consistent with our previous genetic and biochemical studies of the HMT-1-dependent heavy metal detoxification pathway [8], [16] and show that hmt-1 and pcs-1 do not act in a linear pathway for the detoxification of other heavy metals as well as Cd.
hmt-1 and pcs-1 Are Expressed in Distinct Cell Types of C. elegans, but Are Co-Expressed in Coelomocytes
To study the expression patterns of hmt-1 and pcs-1 and determine which tissues and cell types might be involved in the detoxification of heavy metals, we generated transgenic worms expressing GFP under the control of hmt-1 or pcs-1 promoters (phmt-1::GFP and ppcs-1::GFP, respectively). We chose the VF1.1 line from five independent transgenic lines exhibiting the same pattern of phmt-1::GFP-derived fluorescence and the VF15.1 line from nine independent transgenic lines exhibiting the same pattern of ppcs-1::GFP-derived fluorescence for subsequent studies.
Analysis of the distribution of GFP-mediated fluorescence in the VF1.1 line disclosed the hmt-1 promoter activity in intestinal cells and head and tail neurons (Figure 3). Expression of hmt-1 in intestinal cells, but not in head and tail neurons was also observed by Zhao et al [31]. This discrepancy could be due to the absence of some regulatory elements in a construct that was used for generating transgenic animals in Zhao et al [31]. We recently confirmed the pattern of hmt-1-expression observed in our study using a rescuing hmt-1 genomic fragment (Kim, S., Sharma, A., Vatamaniuk, O.K. in preparation).
Analysis of the distribution of the GFP-mediated fluorescence in the VF15.1 strain showed the pcs-1 promoter activity in the hypodermis, the pharyngeal grinder, the pharyngeal-intestinal valve, and the bodywall and vulval muscles, but not in tissues and cell types expressing hmt-1 (Figure 4). This observation is consistent with the suggestion that pcs-1 and hmt-1 act in distinct tissues and agrees with our genetic studies showing that hmt-1 and pcs-1 function in distinct detoxification pathways.
Although the bulk of the GFP expression, driven by hmt-1 or pcs-1 promoters was found in distinct tissues, we also detected GFP in coelomocytes of both, phmt-1::GFP and ppcs-1::GFP transgenic animals. Coelomocytes are large, ovoid mesodermal cells that are distributed as three pairs in the pseudocoelom (body cavity) and continuously and nonspecifically endocytosing pseudocoelomic fluid (Figure 5A, [18]). Coelomocytes have been regarded to function as a primitive liver, although toxin-mediated ablation of coelomocytes results in viable animals under standard laboratory conditions [18]. Therefore, the function of coelomocytes in C. elegans is still unknown.
Coelomocyte-Deficient Worms Are Sensitive Mainly to Heavy Metals, but Not to Oxidative Stress
Finding that genes required for heavy metal detoxification, hmt-1 and pcs-1, were expressed in coelomocytes raised the intriguing possibility that coelomocytes, whose function was unknown, might be involved in heavy metal detoxification. To test the function of coelomocytes in heavy metal detoxification, coelomocyte-deficient worms were assayed for sensitivity to Cd, Cu and As.
The coelomocyte-deficient strain, NP717, was generated by expressing a variant of the Diphtheria toxin A fragment (E148D) in worms under the control of the coelomocyte-specific unc-122 promoter as described previously [18], [32], [33]. In addition, the NP717 strain was engineered to express ssGFP that is secreted into the pseudocoelom from bodywall muscles [18]. If coelomocytes are present and functional, the ssGFP is taken-up and degraded by coelomocytes as shown for strain GS1912 (Figure 5B, [18]). The lack of coelomocytes function in NP717 worms was confirmed by the accumulation of ssGFP in the pseudocoelom (Figure 5B, C, [18]).
Analysis of heavy metal sensitivity showed that the development of coelomocyte-deficient worms was prematurely arrested or delayed in medium supplemented with heavy metals (Figure 6, Table S4). At 50 µM of Cd, only 38.5±4.3% of NP717 worms had reached adult stage, whereas 100% of GS1912 and N2 control worms were egg-laying adults (Figure 6A, Table S4). At higher concentration of Cd (75 µM), only 15.9±4.6% of NP717 worms had reached adult stage, whereas 99.6±0.4% of GS1912 and 100% of N2 worms were young adults (Figure 6A, Table S4). We also observed a pronounced sensitivity of NP717 worms to Cu. The highest concentration of Cu used in this experiment (200 µM) allowed 100% of N2 wild-type worms to reach adulthood compared to 37.2±6.9% of NP717 worms (Figure 6B, Table S4). Increasing concentrations of As in the medium affected developmental rates and viability of NP717 worms as well (Figure 6C, D; Table S4).
To test if the observed Cd, As and Cu sensitivity of coelomocyte-deficient worms is specific to metals, we examined the response of NP717 worms to oxidative stress, an inevitable consequence of many stresses as well as heavy metal toxicity [2]. Response to oxidative stress was evaluated by comparing the ability of NP717 and wild-type worms to survive in the presence of a reactive oxygen species (ROS), hydrogen peroxide (H2O2). Results showed that the viability of NP717 worms was indistinguishable from wild-type worms when cultured on NGM plates lacking H2O2 (Figure 6E). Addition of H2O2 to the medium significantly affected the survival of N2 and NP717 worms (p = 0.016, and p = 0.005 respectively). Although the viability of NP717 worms in the presence of H2O2 appeared to be lower than of wild-type worms, this difference was not statistically significant (p = 0.829). Therefore, we concluded that coelomocytes are mainly involved in detoxification of heavy metals, but not of oxidative stress.
hmt-1 Acts Primarily outside Coelomocytes
To determine whether hmt-1 acts via coelomocytes, we generated coelomocyte-deficient hmt-1(gk161) worms (VF14 strain) and compared their Cd sensitivity with sensitivities of hmt-1(gk161) worms and of coelomocyte-deficient, NP717, worms. If hmt-1 acts in coelomocytes, their absence may not increase heavy metal sensitivity of hmt-1(gk161) worms. In contrast, if hmt-1 does not act in coelomocytes, Cd sensitivity of coelomocyte-deficient hmt-1(gk161) worms might increase (due to an additive effect of a compromised hmt-1-dependent and coelomocyte-dependent detoxification pathway).
Comparison of Cd sensitivity of hmt-1(gk161), coelomocyte-deficient, and coelomocyte-deficient hmt-1(gk161) worms yielded the following observations: 1) at heavy metal concentrations required for about 50% decrease in the number of worms that have reached adulthood, hmt-1(gk161) worms were about 20-fold more sensitive to Cd than coelomocyte-deficient worms (Figure 7, Table S5); 2) ablation of coelomocytes in hmt-1(gk161) worms did not increase Cd sensitivity of hmt-1 mutants (Figure 7, Table S5). The latter observation is consistent with hmt-1 acting, at least in part, via coelomocytes. Nevertheless, considering that hmt-1(gk161) worms with or without coelomocytes were much more sensitive to Cd than coelomocyte-deficient worms having functional hmt-1, we concluded that hmt-1 acts mainly outside coelomocytes, but may act in part in coelomocytes. Our future analysis of the effect of the cell-type specific expression of HMT-1 in transgenic hmt-1(gk161) worms on their heavy metal sensitivity will identify tissues and cell types requiring HMT-1 for heavy metal detoxification.
Concluding Remarks
Four central conclusions can be derived from these investigations. First, CeHMT-1 is distinct from its S. pombe counterpart in that it confers tolerance not only to Cd, but also to other heavy metals and metalloids, As and Cu. These data along with observations that RnABCB6 provides Cu tolerance [22] and our previous phylogenetic analysis showing that SpHMT1 clusters separately from HMTs from C. elegans, Drosophila and mammals [16] suggest that the functions of HMTs in multicellular organisms have diverged from their counterpart in the unicellular organism S. pombe. Second, results of the genetic analysis of the relationship between hmt-1 and pcs-1 and the expression patterns of hmt-1 and pcs-1 substantiate our previous observations that these genes do not act in a simple linear heavy metal detoxification pathway. Third, although coelomocytes have been regarded to act as a primitive liver, their role in C. elegans was unknown. The findings reported here represent the first demonstration of the function of coelomocytes of C. elegans: these cell types are essential for detoxification of heavy metals, but not of ROS, which are by products of multiple stresses as well as heavy metal toxicity. Whether in addition to heavy metals coelomocytes detoxify other toxins, and whether these toxic substances accumulate in coelomocytes, merits in-depth investigation. Fourth, we showed that hmt-1 is expressed in coelomocytes, head neurons, and intestinal cells. Given that HMT-1 counterpart of humans, ABCB6, is expressed in similar tissues and cell types, and since these tissues are affected by heavy metals [1], [2], [20], [21], [34], [35], future studies of the hmt-1 pathway in C. elegans may lead to the development of novel models for studies of heavy metal-caused neurodegenerative conditions and diseases of the digestive tract.
Materials and Methods
C. elegans Culture Conditions and Strains
C. elegans strains were maintained at 20°C on solid Nematode Growth medium (NGM) using the E. coli OP50 strain as a food source [36]. Heavy metals or H2O2 were added to the nematode growth medium (NGM) at the concentrations indicated and sensitivity tests were performed as described below.
We used the following C. elegans strains in our studies:
Bristol N2 (wild-type, and parent of all mutant strains)
DP38: unc-119 (ed3)III
VF1: unc-119(ed3)III;gfEx1[phmt-1::GFP;unc-119(+)]
VF2: pcs-1(tm1748)II
VF3: hmt-1(gk161)III
VF8: hmt-1(gk155)III
VF9: pcs-1(tm1748)II;hmt-1(gk161)III
VF14: hmt-1(gk161)III;arls37;cdls32(pcc1::DT-A(E148D);unc-119-pmyo-2::GFP)
VF15: unc-119(ed3)III; gfEx2[ppcs-1::GFP; unc-119(+)]
NP717: unc-119(ed3); arls37; cdls32(pcc1::DT-A(E148D); unc-119(+) pmyo-2::GFP)
GS1912: dpy-20(e1282); arls37(pmyo-3::ssGFP). In the GS1912 strain 79 amino acids from SEL-1, including a signal sequence, are fused to GFP (ssGFP). ssGFP is expressed in body wall muscles from the myo-3 promoter. The GFP that is secreted into the pseudocoelom is endocytosed and is accumulated in coelomocytes [18].
Prior to analyses, pcs-1(tm1748), hmt-1(gk161) and hmt-1(gk155) alleles were backcrossed six times to N2 using standard genetic techniques. Deletions were confirmed by PCR and gel electrophoresis. The boundaries of deletions were determined by sequencing gDNA isolated from mutant worms. The following primer pairs were used for PCR and sequencing:
hmt-1(gk155):
5′-CCACGATCCACGTAATTTAG
3′-CAGACATTTCCGCTTTCAAC
hmt-1(gk161):
5′-TGAGCGGTGTGTAGAGTTGG
3′-TTCACTGGCTTTTGCCTTCT
pcs-1(tm1748):
5′- TTTCGAATGGCCACGCTATG
3′- CATGCCGACTCGAGCTGTTA
pcs-1 and hmt-1 are located on chromosome II and III respectively. To create double mutants hmt-1(gk161) was mated to pcs-1(tm1748) using standard genetic techniques [36]. The presence of hmt-1(gk161) and pcs-1(tm1748) deletions in the generated VF9 pcs-1 (tm1748)II; hmt-1(gk161)III strain was confirmed by PCR and gel electrophoresis.
Generation of the Coelomocyte-Deficient Worms
The coelomocyte deficiency of worms (NP717 strain) was achieved by toxin-ablation due to the expression the Diphtheria toxin A fragment (E148D), which possesses 1.6% of the wild-type activity, under the control of a coelomocyte-specific promoter [18], [32]. Specifically, pJF143 plasmid (expressing the Diphtheria toxin A fragment bearing an E148D substitution replacing GFP in plasmid pcc1) and pHD137 plasmid (expressing both wild-type unc-119 and GFP in pharyngeal cells) were introduced into the strain NP660 [unc-119(ed3); arIs37(pmyo-3::ssGFP)] by ballistic transformation [18], [33], [37].
To ablate coelomocytes in hmt-1(gk161) worms, hmt-1(gk161) males were crossed to NP717 hermaphrodites. Coelomocyte-deficient hmt-1(gk161) worms (VF14 strain) were selected in F2 based on acute Cd sensitivity resulting from hmt-1 deficiency (Figure 1C, [8] and accumulation of GFP in the pseudocoelom, resulting from the coelomocytes deficiency [18].
Heavy Metal and Oxidative Stress Sensitivities Tests
For analysis of heavy metal sensitivity, adult worms (P0) were placed individually on NGM plates with or without heavy metals (two adults/plate) and allowed to lay eggs for 4–5 h at 20°C before the adult worms were removed and laid eggs were counted. The effect of heavy metals on hatching was analyzed after 24 h. Heavy metals in concentrations used did not appear to affect hatching of wild-type or mutant strains. Instead, heavy metal sensitivity of mutant strains was manifested as larval arrest or delay in larval stages. Therefore, we evaluated heavy metal sensitivity by assessing the percentage of worms from the total number of hatched worms that have reached the adult stage in media with heavy metals. We assessed heavy metal sensitivity after 4.0 or 4.5 days (for NP717 and VF14) of culturing, when hatched worms have reached the adult stage in control (without heavy metals) conditions. We evaluated the viability of worms after additional 24 h of culturing in the presence of heavy metals. Worms were considered dead if they would not move on a plate and would not respond to a gentle touch with a worm pick. Since we started these assays with synchronous population (eggs), all N2 worms and all worms of some of mutant strains were adults after 4 days of culturing in control (without heavy metals) conditions.
The sensitivity of NP717 to oxidative stress was tested by evaluating the viability of worms during culturing in the presence of hydrogen peroxide (H2O2). Freshly-made NGM plates with or without 4 mM H2O2 were seeded with E. coli OP50. After bacterial loan has dried-out, young adults of NP717 or N2 wild-type worms were placed on plates (10 worms/plate). The viability of worms was evaluated every hour. Worms were considered dead if they would not move on a plate and would not respond to a gentle touch with a worm pick.
The results represent mean values of at least three independent experiments each of which had three experimental replicates. Statistical significance of measurements was determined using ANOVA Single Factor Analysis. The total number of worms used in each experiment and condition is indicated in Tables S1–S5. The absence of standard error (S.E.) bars in some parts of some figures indicates that either all of worms had reached the adult stage or survived at the particular condition, or that the S.E. values were very low and thus S.E. bars were behind symbols.
Measurement of PC Content in Worms
Adult hermaphrodites were collected from NGM plates with M9 medium and washed free from E.coli OP50 by three rounds of centrifugation (3,500×g for 2 min) and resuspension in M9 medium. Collected worms were inoculated at a concentration of 30 worms/100 µl into 250 ml of liquid S-medium with Fe-HBED as the Fe source and E. coli OP50 as the food source. Worms were cultured for 5 days before CdCl2 was added to a final concentration of 100 µM for the activation of PC synthesis. After 24 h of incubation in the presence of Cd, worms were collected, washed free from bacteria in S-buffer and resuspended in lysis buffer containing 50 mM TRIS-HCl, pH 7.8, 10 mM 2-mercaptoethanol and 1 mM phenylmethylsulfonyl fluoride (PMSF), and 1 µg/ml each of leupeptin, aprotinin, and pepstatin. Worms were broken by sonication at 4°C in lysis buffer and worm debris was cleared by centrifugation at 3,500×g for 10 min. PCs were analyzed in the supernatant by reverse-phase high-performance liquid chromatography (RP-HPLC) as described [7].
Generation of Transgenic Worms Expressing phmt-1::GFP
To generate the transcriptional reporter, phmt-1::GFP, a 2.1 kb region of the genomic sequence immediately upstream of the start of the hmt-1 coding sequence was PCR-amplified using 5′-CCCAG2GGGCCGCGGAAACTAGTTTTTTAAATTAATAAATT and 3′-AAGCCCATGGTACCGGATTTTTTGGCCTGAAAATCTATAA primer pairs, designed to introduce SacII and KpnI restriction enzyme recognition sites at the 5′ and 3′ends respectively. After restriction digestion, the PCR product was fused with the gfp gene of the pPD117.01 vector [38]. The resulting pPD117.01-phmt-1::GFP construct was co-injected at 80 ng/µl with the selectable marker, a plasmid carrying a functional unc-119 gene (unc-119(+), 100 ng/µl) into the gonadal syncytium of severely paralyzed (uncoordinated, Unc) unc-119(ed3) adult hermaphrodites [39], [40]. Non-unc transgenic animals exhibiting GFP-mediated fluorescence were selected using Leica MZ16FA automated fluorescence stereozoom microscope with Leica EL6000 metal halide illuminator. One line, VF1.1, of five independently-derived transgenic lines showing the same GFP expression pattern, was used for subsequent analyses.
Generation of ppcs-1::GFP Expressing Transgenic Worms
The transcriptional reporter ppcs-1::GFP was constructed by placing the PCR-amplified 1589 bp genomic DNA fragment upstream of 5′ of the start of pcs-1 into SphI/KpnI sites of the pPD117.01 vector [38]. The primer pairs for PCR-amplification of the pcs-1 promoter were: 5′-CTCCAGAAGCATGCCTATTGTCCTGGGTGCGATATTCT and 3′- CCGACATGGTACCTTTTGAAGTGTCTGCAATTAT. The resulting pPD117.01-ppcs1::GFP construct (80 ng/µl) was co-injected with a plasmid, carrying a functional unc-119 (100 ng/µl) into the gonadal syncytium of unc-119 (ed3) animals [39], [40]. Non-unc transgenic animals exhibiting GFP-mediated fluorescence were selected using Leica MZ16FA automated fluorescence stereozoom microscope equipped with Leica EL6000 metal halide illuminator. Nine independent transgenic lines exhibited a similar pattern of GFP-mediated fluorescence. One line, VF15.1, was used for subsequent analyses.
Microscopy
Worms were mounted onto 2% agarose pads, immobilized in 20 mM NaN3 and viewed with a Zeiss Axioscope 2 plus microscope equipped with differential interference contrast (DIC), polarization, and fluorescence optics. As determined by comparing GFP-mediated fluorescence in mobile worms and NaN3-immobilized worms, this anesthetic did not affect the expression pattern of GFP. Micrographs were captured using a Zeiss AxioCam MRc camera and Zeiss AxioVision 4.6 software.
Supporting Information
Acknowledgments
Some nematode strains used in this work were provided by the C. elegans Genetic Center, which is funded by the National Institutes of Health's National Center for Research Resources; the C. elegans Knockout Consortium and the Mitani laboratory (National Bioresource Project, Tokyo Women's Medical University, Japan). We thank Drs. Phil Rea, Meera Sundaram (University of Pennsylvania), Kelly Liu (Cornell University) and Sheena Gayomba and Sugjin Kim (Cornell University) for advising on the manuscript.
Footnotes
Competing Interests: The authors have declared that no competing interests exist.
Funding: This work was co-funded by Cornell Start-up, National Science Foundation (MCB-0923731) and President's Council of Cornell Women (PCCW) Affinito/Stewart Program grants awarded to O.K.V. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
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