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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2007 Dec 6;64(Pt 1):m46. doi: 10.1107/S1600536807050283

Bis(di-n-propyl­amine-κN)bis­(tri-tert-butoxy­silanethiol­ato-κS)chromium(II)

Anna Ciborska a, Katarzyna Baranowska a,*, Wiesław Wojnowski a
PMCID: PMC2914930  PMID: 21200617

Abstract

The title compound, [Cr(C12H27O3SSi)2(C6H15N)2], is a mol­ecular chromium(II) thiol­ate that is coordinated by two dipropyl­amine ligands in a square-planar environment. The mol­ecule lies on an inversion site.

Related literature

For (tetra­hydro­furan)bis­(tri-tert-butoxy­silanethiol­ato)­chromium(II), see: Ciborska et al. (2007). For the synthetic procedures, see: Perrin & Armarego (1988); Piękoś & Wojnowski (1962); Wojnowska & Wojnowski (1974). For comparison of Cr—S bond lengths, see: Okura et al. (1985); Ito (2002); Ciborska et al. (2007).graphic file with name e-64-00m46-scheme1.jpg

Experimental

Crystal data

  • [Cr(C12H27O3SSi)2(C6H15N)2]

  • M r = 813.35

  • Monoclinic, Inline graphic

  • a = 9.3573 (8) Å

  • b = 15.6328 (12) Å

  • c = 16.4333 (12) Å

  • β = 93.296 (7)°

  • V = 2399.9 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.41 mm−1

  • T = 120 (2) K

  • 0.52 × 0.27 × 0.22 mm

Data collection

  • Oxford Diffraction KM-4 CCDdiffractometer

  • Absorption correction: none

  • 15205 measured reflections

  • 4230 independent reflections

  • 3916 reflections with I > 2σ(I)

  • R int = 0.056

Refinement

  • R[F 2 > 2σ(F 2)] = 0.057

  • wR(F 2) = 0.139

  • S = 1.07

  • 4230 reflections

  • 234 parameters

  • H-atom parameters constrained

  • Δρmax = 0.59 e Å−3

  • Δρmin = −0.37 e Å−3

Data collection: CrysAlis CCD (Oxford Diffraction, 2005); cell refinement: CrysAlis RED (Oxford Diffraction, 2005); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807050283/ng2337sup1.cif

e-64-00m46-sup1.cif (20.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807050283/ng2337Isup2.hkl

e-64-00m46-Isup2.hkl (203.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

This work was carried out with financial support from the Polish State Committee (grant No. 3 T09A 12028).

supplementary crystallographic information

Comment

We present here the crystal structure of the title compound (I), which is the first example of square-planar chromium(II) complex (Fig.1). It was obtained in the reaction of anhydrous Cr(II) chloride with sodium tri-tert-butoxysilanethiolate and dipropylamine. The Cr(II) ion is coordinated by two S atoms of the tri-tert-butoxysilanethiolate ligand, and two N atoms of the amine. The central Cr atom sits on an inversion centre at Wyckoff position a (1/2, 1/2, 1/2). The amine ligand forms intramolecular hydrogen bonds of the N–H···O type. The trans angles of the square base are then described by S–Cr–S and N–Cr–N. The Cr–S bond lengths are typical of Cr-thiolate complexes (Okura et al., 1985; Ito 2002; Ciborska et al., 2007). Selected data on important bond lengths and angles are compared in Table.1. Molecules of (I) pack in the crystal structure as discrete entities with no interactions other than von der Waals. Compound (I) is one of the few structurally defined planar, four-coordinate Cr(II) thiolate complexes.

Experimental

All manipulations were conducted under an atmosphere of nitrogen using standard Schlenk techniques. Solvents and the amine were purified and dried by standard methods (Perrin & Armarego, 1988). The substrate (tBuO)3SiSNa was prepared according to literature methods (Piękoś & Wojnowski, 1962; Wojnowska & Wojnowski, 1974). The compound was synthesized by addition of the CrCl2 solution (0.26 g, 2.13 mmol) in tetrahydrofuran (20 ml) to (tBuO)3SiSNa solution (1.24 g, 4.12 mmol) in toluene (15 ml) and stirring for 1 h. Then, to the pale-green solution dipropylamine (0.55 ml, 0.4 g, 4 mmol) was added and stirred for next 12 h. After that the mixture was filtered. The dark blue filtrate was concentrated and cooled (250 K) afford blue crystals.

Refinement

All H atoms were refined as riding on C atoms with methyl C—H = 0.98 Å, methylene C—H = 0.99 Å, N–H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for CH2 and amino groups and 1.5Ueq(C) for CH3 groups.

Figures

Fig. 1.

Fig. 1.

A view of the molecule of (I), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. C-bound H atoms have been omitted.

Fig. 2.

Fig. 2.

The crystal packing of the title compound, viewed along the a-axis.

Crystal data

[Cr(C12H27O3SSi)2(C6H15N)2] F000 = 892
Mr = 813.35 Dx = 1.126 Mg m3
Monoclinic, P21/n Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 8752 reflections
a = 9.3573 (8) Å θ = 2.9–32.5º
b = 15.6328 (12) Å µ = 0.41 mm1
c = 16.4333 (12) Å T = 120 (2) K
β = 93.296 (7)º Prism, blue
V = 2399.9 (3) Å3 0.52 × 0.27 × 0.22 mm
Z = 2

Data collection

Oxford Diffraction KM-4 CCD diffractometer 3916 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.056
Detector resolution: 8.1883 pixels mm-1 θmax = 25.1º
T = 120(2) K θmin = 2.8º
ω (0.75° width) scans h = −11→11
Absorption correction: none k = −18→16
15205 measured reflections l = −19→14
4230 independent reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057 H-atom parameters constrained
wR(F2) = 0.139   w = 1/[σ2(Fo2) + (0.0625P)2 + 4.3543P] where P = (Fo2 + 2Fc2)/3
S = 1.07 (Δ/σ)max = 0.001
4230 reflections Δρmax = 0.59 e Å3
234 parameters Δρmin = −0.37 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.8592 (3) 0.30282 (17) 0.12476 (17) 0.0227 (6)
C2 0.8284 (3) 0.25962 (19) 0.20505 (17) 0.0282 (6)
H2A 0.775 0.2066 0.1939 0.042*
H2B 0.7715 0.2981 0.2374 0.042*
H2C 0.9189 0.2464 0.2354 0.042*
C3 0.7208 (3) 0.31714 (19) 0.07329 (19) 0.0300 (7)
H3A 0.7428 0.3422 0.0208 0.045*
H3B 0.6588 0.3562 0.1019 0.045*
H3C 0.6717 0.2623 0.0641 0.045*
C4 0.9378 (3) 0.38698 (18) 0.14046 (17) 0.0264 (6)
H4A 1.0292 0.376 0.1708 0.04*
H4B 0.8791 0.4249 0.1723 0.04*
H4C 0.9558 0.4143 0.0883 0.04*
C5 1.2379 (3) 0.35502 (17) −0.01745 (16) 0.0212 (6)
C6 1.1047 (3) 0.35943 (19) −0.07507 (17) 0.0288 (6)
H6A 1.0755 0.3014 −0.0914 0.043*
H6B 1.1258 0.3926 −0.1235 0.043*
H6C 1.027 0.3871 −0.0474 0.043*
C7 1.2852 (4) 0.44407 (18) 0.00984 (18) 0.0310 (7)
H7A 1.2078 0.472 0.0375 0.046*
H7B 1.3084 0.478 −0.0378 0.046*
H7C 1.3701 0.4397 0.0474 0.046*
C8 1.3579 (3) 0.30911 (19) −0.05804 (18) 0.0292 (6)
H8A 1.4401 0.3025 −0.0188 0.044*
H8B 1.3864 0.3426 −0.1048 0.044*
H8C 1.3246 0.2526 −0.0767 0.044*
C9 1.2921 (3) 0.1975 (2) 0.22075 (18) 0.0282 (6)
C10 1.3575 (4) 0.2848 (2) 0.2355 (2) 0.0414 (8)
H10A 1.3828 0.3095 0.1835 0.062*
H10B 1.4438 0.2794 0.2718 0.062*
H10C 1.2883 0.322 0.2607 0.062*
C11 1.3932 (4) 0.1416 (3) 0.1761 (3) 0.0706 (15)
H11A 1.3511 0.0846 0.1682 0.106*
H11B 1.4844 0.1368 0.2083 0.106*
H11C 1.4098 0.1671 0.123 0.106*
C12 1.2512 (4) 0.1601 (3) 0.3016 (2) 0.0618 (13)
H12A 1.1754 0.1949 0.3236 0.093*
H12B 1.3351 0.1598 0.3401 0.093*
H12C 1.2167 0.1014 0.2931 0.093*
C13 0.8096 (3) 0.02560 (17) 0.14156 (15) 0.0203 (5)
H13A 0.7703 −0.033 0.136 0.024*
H13B 0.7394 0.061 0.1693 0.024*
C14 0.9489 (3) 0.02298 (18) 0.19315 (16) 0.0233 (6)
H14A 0.9898 0.0813 0.1973 0.028*
H14B 1.018 −0.014 0.1664 0.028*
C15 0.9268 (3) −0.0110 (2) 0.27823 (17) 0.0311 (7)
H15A 0.8585 0.0256 0.3049 0.047*
H15B 1.0184 −0.011 0.3103 0.047*
H15C 0.8893 −0.0695 0.2744 0.047*
C16 0.6911 (3) 0.06510 (17) 0.01127 (16) 0.0203 (5)
H16A 0.622 0.0987 0.0416 0.024*
H16B 0.6525 0.0064 0.0042 0.024*
C17 0.7052 (3) 0.10509 (19) −0.07170 (17) 0.0254 (6)
H17A 0.7743 0.0717 −0.1023 0.03*
H17B 0.7425 0.1641 −0.065 0.03*
C18 0.5605 (3) 0.1073 (2) −0.12003 (19) 0.0324 (7)
H18A 0.529 0.0487 −0.1325 0.049*
H18B 0.5701 0.1389 −0.171 0.049*
H18C 0.4898 0.1358 −0.0876 0.049*
N1 0.8296 (2) 0.06135 (14) 0.05944 (13) 0.0187 (5)
H1 0.8581 0.1178 0.0677 0.022*
O1 0.94135 (19) 0.24496 (11) 0.07689 (11) 0.0196 (4)
O2 1.2078 (2) 0.31042 (11) 0.05632 (11) 0.0209 (4)
O3 1.15806 (19) 0.20698 (12) 0.17357 (11) 0.0217 (4)
Si1 1.11443 (7) 0.22632 (4) 0.07776 (4) 0.01703 (19)
S1 1.14306 (7) 0.12779 (4) −0.00428 (4) 0.02372 (19)
Cr1 1 0 0 0.01522 (17)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0202 (13) 0.0198 (13) 0.0281 (14) 0.0042 (11) 0.0011 (11) −0.0043 (11)
C2 0.0295 (15) 0.0251 (15) 0.0303 (15) 0.0039 (12) 0.0060 (12) −0.0023 (12)
C3 0.0247 (15) 0.0274 (15) 0.0374 (16) 0.0083 (12) −0.0041 (12) −0.0095 (13)
C4 0.0271 (15) 0.0223 (14) 0.0299 (15) 0.0012 (11) 0.0033 (11) −0.0072 (11)
C5 0.0239 (14) 0.0159 (13) 0.0234 (13) −0.0055 (11) −0.0009 (10) 0.0030 (10)
C6 0.0293 (16) 0.0282 (15) 0.0280 (14) 0.0020 (12) −0.0056 (12) 0.0024 (12)
C7 0.0415 (18) 0.0208 (14) 0.0306 (15) −0.0107 (13) 0.0018 (13) 0.0018 (12)
C8 0.0266 (15) 0.0293 (15) 0.0321 (15) −0.0011 (12) 0.0057 (12) 0.0033 (12)
C9 0.0190 (14) 0.0318 (16) 0.0327 (15) 0.0001 (12) −0.0083 (11) 0.0045 (12)
C10 0.0363 (18) 0.047 (2) 0.0396 (18) −0.0114 (16) −0.0104 (14) −0.0010 (15)
C11 0.040 (2) 0.081 (3) 0.087 (3) 0.033 (2) −0.028 (2) −0.038 (3)
C12 0.040 (2) 0.090 (3) 0.052 (2) −0.025 (2) −0.0263 (17) 0.041 (2)
C13 0.0223 (13) 0.0174 (13) 0.0218 (13) −0.0021 (10) 0.0066 (10) −0.0014 (10)
C14 0.0236 (14) 0.0256 (14) 0.0212 (13) −0.0027 (11) 0.0044 (10) 0.0032 (11)
C15 0.0342 (17) 0.0349 (17) 0.0243 (14) −0.0046 (13) 0.0021 (12) 0.0041 (12)
C16 0.0152 (12) 0.0195 (13) 0.0265 (13) 0.0034 (10) 0.0041 (10) −0.0005 (10)
C17 0.0240 (14) 0.0258 (14) 0.0260 (14) −0.0004 (11) −0.0016 (11) 0.0027 (11)
C18 0.0288 (16) 0.0348 (17) 0.0330 (15) 0.0069 (13) −0.0036 (12) 0.0028 (13)
N1 0.0197 (11) 0.0154 (11) 0.0211 (11) 0.0002 (9) 0.0034 (8) 0.0000 (8)
O1 0.0179 (9) 0.0176 (9) 0.0231 (9) 0.0021 (7) −0.0002 (7) −0.0033 (7)
O2 0.0230 (10) 0.0175 (9) 0.0220 (9) −0.0046 (7) 0.0002 (7) 0.0003 (7)
O3 0.0159 (9) 0.0234 (10) 0.0253 (10) −0.0014 (8) −0.0023 (7) 0.0034 (8)
Si1 0.0162 (4) 0.0147 (4) 0.0202 (4) −0.0003 (3) 0.0011 (3) −0.0008 (3)
S1 0.0239 (4) 0.0162 (3) 0.0321 (4) −0.0046 (3) 0.0113 (3) −0.0061 (3)
Cr1 0.0152 (3) 0.0136 (3) 0.0171 (3) −0.0002 (2) 0.0027 (2) −0.0008 (2)

Geometric parameters (Å, °)

C1—O1 1.448 (3) C11—H11B 0.98
C1—C3 1.522 (4) C11—H11C 0.98
C1—C4 1.522 (4) C12—H12A 0.98
C1—C2 1.524 (4) C12—H12B 0.98
C2—H2A 0.98 C12—H12C 0.98
C2—H2B 0.98 C13—N1 1.482 (3)
C2—H2C 0.98 C13—C14 1.514 (4)
C3—H3A 0.98 C13—H13A 0.99
C3—H3B 0.98 C13—H13B 0.99
C3—H3C 0.98 C14—C15 1.521 (4)
C4—H4A 0.98 C14—H14A 0.99
C4—H4B 0.98 C14—H14B 0.99
C4—H4C 0.98 C15—H15A 0.98
C5—O2 1.440 (3) C15—H15B 0.98
C5—C8 1.519 (4) C15—H15C 0.98
C5—C7 1.521 (4) C16—N1 1.480 (3)
C5—C6 1.523 (4) C16—C17 1.513 (4)
C6—H6A 0.98 C16—H16A 0.99
C6—H6B 0.98 C16—H16B 0.99
C6—H6C 0.98 C17—C18 1.530 (4)
C7—H7A 0.98 C17—H17A 0.99
C7—H7B 0.98 C17—H17B 0.99
C7—H7C 0.98 C18—H18A 0.98
C8—H8A 0.98 C18—H18B 0.98
C8—H8B 0.98 C18—H18C 0.98
C8—H8C 0.98 N1—Cr1 2.144 (2)
C9—O3 1.444 (3) N1—H1 0.93
C9—C11 1.508 (5) O1—Si1 1.6448 (19)
C9—C10 1.509 (4) O2—Si1 1.6283 (19)
C9—C12 1.520 (4) O3—Si1 1.6320 (19)
C10—H10A 0.98 Si1—S1 2.0744 (9)
C10—H10B 0.98 S1—Cr1 2.4080 (7)
C10—H10C 0.98 Cr1—N1i 2.144 (2)
C11—H11A 0.98 Cr1—S1i 2.4080 (7)
O1—C1—C3 104.6 (2) H11B—C11—H11C 109.5
O1—C1—C4 111.4 (2) C9—C12—H12A 109.5
C3—C1—C4 110.8 (2) C9—C12—H12B 109.5
O1—C1—C2 109.0 (2) H12A—C12—H12B 109.5
C3—C1—C2 110.4 (2) C9—C12—H12C 109.5
C4—C1—C2 110.5 (2) H12A—C12—H12C 109.5
C1—C2—H2A 109.5 H12B—C12—H12C 109.5
C1—C2—H2B 109.5 N1—C13—C14 111.8 (2)
H2A—C2—H2B 109.5 N1—C13—H13A 109.3
C1—C2—H2C 109.5 C14—C13—H13A 109.3
H2A—C2—H2C 109.5 N1—C13—H13B 109.3
H2B—C2—H2C 109.5 C14—C13—H13B 109.3
C1—C3—H3A 109.5 H13A—C13—H13B 107.9
C1—C3—H3B 109.5 C13—C14—C15 111.5 (2)
H3A—C3—H3B 109.5 C13—C14—H14A 109.3
C1—C3—H3C 109.5 C15—C14—H14A 109.3
H3A—C3—H3C 109.5 C13—C14—H14B 109.3
H3B—C3—H3C 109.5 C15—C14—H14B 109.3
C1—C4—H4A 109.5 H14A—C14—H14B 108
C1—C4—H4B 109.5 C14—C15—H15A 109.5
H4A—C4—H4B 109.5 C14—C15—H15B 109.5
C1—C4—H4C 109.5 H15A—C15—H15B 109.5
H4A—C4—H4C 109.5 C14—C15—H15C 109.5
H4B—C4—H4C 109.5 H15A—C15—H15C 109.5
O2—C5—C8 109.0 (2) H15B—C15—H15C 109.5
O2—C5—C7 105.2 (2) N1—C16—C17 112.3 (2)
C8—C5—C7 110.6 (2) N1—C16—H16A 109.1
O2—C5—C6 110.6 (2) C17—C16—H16A 109.1
C8—C5—C6 110.3 (2) N1—C16—H16B 109.1
C7—C5—C6 110.9 (2) C17—C16—H16B 109.1
C5—C6—H6A 109.5 H16A—C16—H16B 107.9
C5—C6—H6B 109.5 C16—C17—C18 110.9 (2)
H6A—C6—H6B 109.5 C16—C17—H17A 109.5
C5—C6—H6C 109.5 C18—C17—H17A 109.5
H6A—C6—H6C 109.5 C16—C17—H17B 109.5
H6B—C6—H6C 109.5 C18—C17—H17B 109.5
C5—C7—H7A 109.5 H17A—C17—H17B 108
C5—C7—H7B 109.5 C17—C18—H18A 109.5
H7A—C7—H7B 109.5 C17—C18—H18B 109.5
C5—C7—H7C 109.5 H18A—C18—H18B 109.5
H7A—C7—H7C 109.5 C17—C18—H18C 109.5
H7B—C7—H7C 109.5 H18A—C18—H18C 109.5
C5—C8—H8A 109.5 H18B—C18—H18C 109.5
C5—C8—H8B 109.5 C16—N1—C13 110.5 (2)
H8A—C8—H8B 109.5 C16—N1—Cr1 115.17 (15)
C5—C8—H8C 109.5 C13—N1—Cr1 112.46 (16)
H8A—C8—H8C 109.5 C16—N1—H1 106
H8B—C8—H8C 109.5 C13—N1—H1 106
O3—C9—C11 110.4 (3) Cr1—N1—H1 106
O3—C9—C10 109.0 (2) C1—O1—Si1 131.23 (16)
C11—C9—C10 110.0 (3) C5—O2—Si1 134.93 (16)
O3—C9—C12 104.7 (2) C9—O3—Si1 134.30 (17)
C11—C9—C12 113.5 (4) O2—Si1—O3 104.52 (10)
C10—C9—C12 109.1 (3) O2—Si1—O1 113.29 (10)
C9—C10—H10A 109.5 O3—Si1—O1 103.46 (9)
C9—C10—H10B 109.5 O2—Si1—S1 111.60 (7)
H10A—C10—H10B 109.5 O3—Si1—S1 117.06 (8)
C9—C10—H10C 109.5 O1—Si1—S1 106.85 (7)
H10A—C10—H10C 109.5 Si1—S1—Cr1 120.28 (3)
H10B—C10—H10C 109.5 N1i—Cr1—N1 180.00 (15)
C9—C11—H11A 109.5 N1i—Cr1—S1 85.90 (6)
C9—C11—H11B 109.5 N1—Cr1—S1 94.10 (6)
H11A—C11—H11B 109.5 N1i—Cr1—S1i 94.10 (6)
C9—C11—H11C 109.5 N1—Cr1—S1i 85.90 (6)
H11A—C11—H11C 109.5 S1—Cr1—S1i 180.000 (17)

Symmetry codes: (i) −x+2, −y, −z.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1···O1 0.93 2.14 3.063 (3) 174

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NG2337).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807050283/ng2337sup1.cif

e-64-00m46-sup1.cif (20.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807050283/ng2337Isup2.hkl

e-64-00m46-Isup2.hkl (203.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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