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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2007 Dec 6;64(Pt 1):o23. doi: 10.1107/S1600536807060874

3-Allyl-1-(2-cyano­benz­yl)-2-methyl­benzimidazol-3-ium bromide

Xiong-Bin Xu a, Qiong Ye a,*
PMCID: PMC2914985  PMID: 21200797

Abstract

In the title compound, C19H18N3 +·Br, both the allyl and cyano­phenyl groups are approximately perpendicular to the central benzimidazole unit, making dihedral angles of 89.7 (2) and 85.09 (13)°, respectively. The crystal packing is dominated by C—H⋯Br inter­actions, with each anion inter­acting with five neighboring cations.

Related literature

For olefin–copper coordination compounds, see: Ye et al. (2005). For the synthesis, see: Aakeroy et al. (2005). For a similar structure, see: Herrmann et al. (1997).graphic file with name e-64-00o23-scheme1.jpg

Experimental

Crystal data

  • C19H18N3 +·Br

  • M r = 368.27

  • Triclinic, Inline graphic

  • a = 9.123 (5) Å

  • b = 10.100 (4) Å

  • c = 10.520 (4) Å

  • α = 98.924 (2)°

  • β = 108.490 (18)°

  • γ = 102.851 (11)°

  • V = 869.2 (7) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 2.37 mm−1

  • T = 293 (2) K

  • 0.15 × 0.10 × 0.07 mm

Data collection

  • Rigaku Mercury2 CCD diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.872, T max = 1.000 (expected range = 0.739–0.847)

  • 9212 measured reflections

  • 4233 independent reflections

  • 3434 reflections with I > 2σ(I)

  • R int = 0.035

Refinement

  • R[F 2 > 2σ(F 2)] = 0.045

  • wR(F 2) = 0.143

  • S = 0.92

  • 4233 reflections

  • 209 parameters

  • H-atom parameters constrained

  • Δρmax = 0.38 e Å−3

  • Δρmin = −0.40 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Sheldrick, 1999); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807060874/fl2171sup1.cif

e-64-00o23-sup1.cif (16.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807060874/fl2171Isup2.hkl

e-64-00o23-Isup2.hkl (207.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C13—H13A⋯Br1 0.93 2.91 3.738 (4) 149
C14—H14A⋯Br1i 0.97 2.82 3.740 (3) 158
C20—H20A⋯Br1ii 0.93 2.91 3.787 (4) 158
C29—H29A⋯Br1iii 0.97 2.90 3.798 (3) 155
C29—H29B⋯Br1ii 0.97 2.91 3.848 (3) 164

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

This work was supported by a Start-up Grant from SEU to YQ.

supplementary crystallographic information

Comment

It has been almost a century since the discovery of olefin- copper coordination compounds. We are interested in obtaining stable olefin- copper(I) coordination compounds under solvothermal conditions since these compounds display novel cluster structures and interesting physical properties such as fluorescence, SHG and ferroelectric(Ye et al. (2005)). The title compound (Fig 1) was synthesized as part of this project. No unexpected bond distances and angles were found in (I). Both the allyl and cyano-phenyl groups are approximately perpendicular to the central benzimidazole moiety with dihedral angles of 89.72 (23)° and 85.09 (13)° respectively such that the phenyl ring and the olefin moeity are almost parallel to one another in a conformation similar to that found by Herrmann et al. (1997). Thus, the molecule could adopt an end-to-head or parallel packing mode to form tight stacking. However, no π-π interactions are found. Crystal packing is dominated by C—H···Br interactions with each anion cation interacting with five neighboring cations.

Experimental

2-((2-methyl-1H-benzo[d]imidazol-1-yl)methyl) benzonitrile (2.48 g) synthesized according to the procedure reported by (Aakeroy, et al.(2005) was dissolved in THF (30 ml) and allyl bromide;3- bromopropene (3.7 g) was added.The solution was stirred at 50° C for two days. The resulting white solid resultant was filterered out and washed twice with acetone to get 1.94 g of (I), (yield 66.7%). Colorless crystals suitable for X-ray diffraction were obtained by evaporation from methanol/water.

Refinement

Positional parameters of all the H atoms were calculated geometrically and were allowed to ride on the C atoms to which they are bonded, with Uiso(H) = 1.2Ueq.

Figures

Fig. 1.

Fig. 1.

A view of the title compound with the atomic numbering scheme. Displacement ellipsoids were drawn at the 30% probability level

Fig. 2.

Fig. 2.

Packing and cell box view of the title compound.

Crystal data

C19H18N3+·Br Z = 2
Mr = 368.27 F000 = 376
Triclinic, P1 Dx = 1.407 Mg m3
Hall symbol: -P 1 Mo Kα radiation λ = 0.71073 Å
a = 9.123 (5) Å Cell parameters from 2405 reflections
b = 10.100 (4) Å θ = 3.2–28.2º
c = 10.520 (4) Å µ = 2.37 mm1
α = 98.924 (2)º T = 293 (2) K
β = 108.490 (18)º Prism, colorless
γ = 102.851 (11)º 0.15 × 0.10 × 0.07 mm
V = 869.2 (7) Å3

Data collection

Rigaku Mercury2 CCD diffractometer 4233 independent reflections
Radiation source: fine-focus sealed tube 3434 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.035
Detector resolution: 13.6612 pixels mm-1 θmax = 28.3º
T = 293(2) K θmin = 2.6º
CCD_Profile_fitting scans h = −12→12
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005) k = −13→13
Tmin = 0.872, Tmax = 1.000 l = −13→13
9212 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045 H-atom parameters constrained
wR(F2) = 0.143   w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
S = 0.92 (Δ/σ)max = 0.001
4233 reflections Δρmax = 0.38 e Å3
209 parameters Δρmin = −0.40 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.28828 (4) 0.88178 (3) 0.19130 (3) 0.04548 (14)
N1 −0.1709 (5) 0.4159 (4) 0.1763 (4) 0.0776 (11)
N4 −0.1796 (3) 0.1568 (3) 0.4110 (3) 0.0405 (6)
N6 −0.0363 (3) 0.1395 (3) 0.2796 (2) 0.0363 (5)
C2 −0.3282 (6) 0.3088 (6) 0.4888 (5) 0.0740 (12)
H2A −0.4050 0.3187 0.5274 0.089*
C3 0.3772 (5) 0.3551 (5) 0.1240 (5) 0.0682 (11)
H3A 0.4730 0.3470 0.1146 0.082*
C4 0.3403 (5) 0.4803 (5) 0.1239 (5) 0.0705 (12)
H4A 0.4108 0.5561 0.1133 0.085*
C6 −0.2509 (8) 0.4191 (6) 0.4705 (6) 0.0950 (17)
H6A −0.1700 0.4139 0.4312 0.114*
H6B −0.2708 0.5071 0.4951 0.114*
C8 −0.3359 (4) 0.0951 (5) 0.1562 (4) 0.0572 (9)
H8A −0.4256 0.0966 0.1849 0.086*
H8B −0.3539 0.0031 0.1023 0.086*
H8C −0.3255 0.1618 0.1015 0.086*
C11 −0.0554 (5) 0.3978 (4) 0.1660 (4) 0.0568 (9)
C13 0.1989 (6) 0.4936 (4) 0.1394 (4) 0.0619 (10)
H13A 0.1752 0.5787 0.1416 0.074*
C14 −0.3138 (4) 0.1649 (4) 0.4574 (4) 0.0530 (9)
H14A −0.2991 0.1291 0.5396 0.064*
H14B −0.4139 0.1050 0.3861 0.064*
C17 0.2104 (5) 0.2193 (4) 0.6974 (4) 0.0584 (9)
H17A 0.2618 0.2399 0.7929 0.070*
C18 0.3013 (4) 0.2017 (4) 0.6138 (4) 0.0562 (9)
H18A 0.4098 0.2076 0.6551 0.067*
C20 0.2714 (4) 0.2415 (4) 0.1381 (4) 0.0525 (8)
H20A 0.2975 0.1576 0.1383 0.063*
C22 0.0487 (4) 0.2073 (4) 0.6436 (3) 0.0499 (8)
H22A −0.0116 0.2162 0.6993 0.060*
C26 0.2329 (4) 0.1757 (4) 0.4708 (3) 0.0471 (7)
H26A 0.2925 0.1642 0.4149 0.056*
C29 0.0100 (4) 0.1207 (3) 0.1566 (3) 0.0395 (6)
H29A −0.0867 0.0945 0.0741 0.047*
H29B 0.0584 0.0444 0.1556 0.047*
C30 0.0921 (4) 0.3786 (4) 0.1518 (3) 0.0470 (7)
C32 −0.1857 (4) 0.1316 (3) 0.2799 (3) 0.0398 (6)
C34 −0.0194 (4) 0.1809 (3) 0.5002 (3) 0.0390 (6)
C36 0.0703 (3) 0.1677 (3) 0.4164 (3) 0.0375 (6)
C38 0.1274 (4) 0.2503 (3) 0.1520 (3) 0.0391 (6)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.0481 (2) 0.0486 (2) 0.0420 (2) 0.01498 (14) 0.01626 (15) 0.01637 (14)
N1 0.092 (3) 0.078 (2) 0.094 (3) 0.050 (2) 0.051 (2) 0.034 (2)
N4 0.0351 (13) 0.0511 (15) 0.0358 (13) 0.0106 (11) 0.0139 (10) 0.0129 (11)
N6 0.0338 (12) 0.0422 (13) 0.0345 (12) 0.0112 (10) 0.0135 (10) 0.0118 (10)
C2 0.062 (3) 0.086 (3) 0.079 (3) 0.025 (2) 0.034 (2) 0.011 (2)
C3 0.054 (2) 0.082 (3) 0.076 (3) 0.011 (2) 0.032 (2) 0.032 (2)
C4 0.068 (3) 0.063 (3) 0.069 (3) −0.008 (2) 0.022 (2) 0.028 (2)
C6 0.117 (5) 0.085 (4) 0.096 (4) 0.044 (3) 0.050 (4) 0.015 (3)
C8 0.0373 (17) 0.084 (3) 0.0443 (19) 0.0105 (17) 0.0088 (14) 0.0216 (18)
C11 0.071 (2) 0.055 (2) 0.061 (2) 0.0308 (18) 0.0323 (19) 0.0238 (17)
C13 0.079 (3) 0.0445 (19) 0.062 (2) 0.0124 (18) 0.026 (2) 0.0195 (17)
C14 0.0428 (18) 0.076 (2) 0.0447 (19) 0.0134 (16) 0.0240 (15) 0.0161 (17)
C17 0.055 (2) 0.071 (2) 0.0361 (18) 0.0108 (17) 0.0047 (15) 0.0113 (16)
C18 0.0442 (19) 0.066 (2) 0.050 (2) 0.0148 (16) 0.0039 (15) 0.0172 (17)
C20 0.0500 (19) 0.059 (2) 0.057 (2) 0.0203 (16) 0.0238 (16) 0.0241 (17)
C22 0.055 (2) 0.0531 (19) 0.0370 (16) 0.0115 (15) 0.0142 (14) 0.0107 (14)
C26 0.0394 (16) 0.0554 (19) 0.0463 (18) 0.0166 (14) 0.0118 (14) 0.0158 (15)
C29 0.0415 (15) 0.0431 (16) 0.0354 (15) 0.0120 (12) 0.0161 (12) 0.0100 (12)
C30 0.0554 (19) 0.0478 (18) 0.0404 (17) 0.0164 (14) 0.0184 (15) 0.0143 (14)
C32 0.0357 (14) 0.0451 (16) 0.0380 (15) 0.0087 (12) 0.0117 (12) 0.0164 (12)
C34 0.0389 (15) 0.0416 (15) 0.0342 (15) 0.0108 (12) 0.0106 (12) 0.0102 (12)
C36 0.0364 (14) 0.0368 (14) 0.0375 (15) 0.0103 (11) 0.0089 (12) 0.0143 (12)
C38 0.0415 (15) 0.0428 (16) 0.0332 (14) 0.0121 (12) 0.0123 (12) 0.0130 (12)

Geometric parameters (Å, °)

N1—C11 1.144 (5) C11—C30 1.451 (5)
N4—C32 1.344 (4) C13—C30 1.393 (5)
N4—C34 1.406 (4) C13—H13A 0.9300
N4—C14 1.468 (4) C14—H14A 0.9700
N6—C32 1.348 (4) C14—H14B 0.9700
N6—C36 1.400 (4) C17—C22 1.371 (5)
N6—C29 1.482 (4) C17—C18 1.405 (6)
C2—C6 1.256 (7) C17—H17A 0.9300
C2—C14 1.484 (7) C18—C26 1.389 (5)
C2—H2A 0.9300 C18—H18A 0.9300
C3—C4 1.379 (7) C20—C38 1.388 (5)
C3—C20 1.387 (5) C20—H20A 0.9300
C3—H3A 0.9300 C22—C34 1.392 (4)
C4—C13 1.383 (6) C22—H22A 0.9300
C4—H4A 0.9300 C26—C36 1.389 (4)
C6—H6A 0.9600 C26—H26A 0.9300
C6—H6B 0.9600 C29—C38 1.514 (4)
C8—C32 1.484 (4) C29—H29A 0.9700
C8—H8A 0.9600 C29—H29B 0.9700
C8—H8B 0.9600 C30—C38 1.403 (5)
C8—H8C 0.9600 C34—C36 1.391 (4)
C32—N4—C34 108.8 (3) C22—C17—H17A 118.8
C32—N4—C14 126.9 (3) C18—C17—H17A 118.8
C34—N4—C14 124.3 (3) C26—C18—C17 121.6 (3)
C32—N6—C36 108.6 (2) C26—C18—H18A 119.2
C32—N6—C29 126.6 (2) C17—C18—H18A 119.2
C36—N6—C29 124.8 (2) C3—C20—C38 121.4 (4)
C6—C2—C14 128.9 (5) C3—C20—H20A 119.3
C6—C2—H2A 115.5 C38—C20—H20A 119.3
C14—C2—H2A 115.5 C17—C22—C34 115.8 (3)
C4—C3—C20 120.0 (4) C17—C22—H22A 122.1
C4—C3—H3A 120.0 C34—C22—H22A 122.1
C20—C3—H3A 120.0 C36—C26—C18 116.0 (3)
C3—C4—C13 120.3 (3) C36—C26—H26A 122.0
C3—C4—H4A 119.9 C18—C26—H26A 122.0
C13—C4—H4A 119.9 N6—C29—C38 113.6 (2)
C2—C6—H6A 118.5 N6—C29—H29A 108.9
C2—C6—H6B 121.6 C38—C29—H29A 108.9
H6A—C6—H6B 120.0 N6—C29—H29B 108.9
C32—C8—H8A 109.5 C38—C29—H29B 108.9
C32—C8—H8B 109.5 H29A—C29—H29B 107.7
H8A—C8—H8B 109.5 C13—C30—C38 121.1 (3)
C32—C8—H8C 109.5 C13—C30—C11 117.2 (3)
H8A—C8—H8C 109.5 C38—C30—C11 121.7 (3)
H8B—C8—H8C 109.5 N4—C32—N6 109.3 (3)
N1—C11—C30 178.4 (4) N4—C32—C8 124.5 (3)
C4—C13—C30 119.5 (4) N6—C32—C8 126.2 (3)
C4—C13—H13A 120.3 C36—C34—C22 122.4 (3)
C30—C13—H13A 120.3 C36—C34—N4 106.4 (3)
N4—C14—C2 113.6 (3) C22—C34—N4 131.2 (3)
N4—C14—H14A 108.8 C26—C36—C34 121.7 (3)
C2—C14—H14A 108.8 C26—C36—N6 131.3 (3)
N4—C14—H14B 108.8 C34—C36—N6 106.9 (2)
C2—C14—H14B 108.8 C20—C38—C30 117.8 (3)
H14A—C14—H14B 107.7 C20—C38—C29 119.5 (3)
C22—C17—C18 122.4 (3) C30—C38—C29 122.5 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C13—H13A···Br1 0.93 2.91 3.738 (4) 149
C14—H14A···Br1i 0.97 2.82 3.740 (3) 158
C20—H20A···Br1ii 0.93 2.91 3.787 (4) 158
C29—H29A···Br1iii 0.97 2.90 3.798 (3) 155
C29—H29B···Br1ii 0.97 2.91 3.848 (3) 164

Symmetry codes: (i) −x, −y+1, −z+1; (ii) x, y−1, z; (iii) −x, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FL2171).

References

  1. Aakeroy, C. B., Desper, J. & &Urbina, J. F. (2005). Cryst. Growth Des.5, 1283–1293.
  2. Herrmann, W. A., Goossen, L. J., Artus, G. R. J. & Kocher, C. (1997). Organometallics, 16, 2472–2474.
  3. Rigaku (2005). CrystalClear Version 1.4.0. Rigaku Corporation, Tokyo, Japan.
  4. Sheldrick, G. M. (1997). SHELXS97 and SHELXL97 University of Göttingen, Germany.
  5. Sheldrick, G. M. (1999). SHELXTL/PC Version 5.1. Bruker AXS Inc., Madison, Wisconsin, USA.
  6. Ye, Q., Wang, X.-S., Zhao, H. & Xiong, R.-G. (2005). Chem. Soc. Rev.34, 208–225. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807060874/fl2171sup1.cif

e-64-00o23-sup1.cif (16.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807060874/fl2171Isup2.hkl

e-64-00o23-Isup2.hkl (207.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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