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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2007 Dec 6;64(Pt 1):m110. doi: 10.1107/S1600536807064744

catena-Poly[[silver(I)-μ-N-(3-pyridyl­meth­yl)pyridine-4-carboxamide] nitrate monohydrate]

Yu-Tao Ma a, Qi-Hua Zhao a,*
PMCID: PMC2915063  PMID: 21200470

Abstract

In the title compound, {[Ag(C12H11N3O)]NO3·H2O}n, the Ag atom is coordinated by two N atoms from the heterocyclic ligand, giving a linear polycationic chain. Two long Ag⋯Onitrate inter­actions [2.667 (3) and 2.840 (3) Å] result in a three-dimensional network. The water mol­ecule consolidates the network structure by forming hydrogen bonds, one to the polycationic chain and one to the nitrate anion.

Related literature

For related literature, see: Cordes & Hanton (2007); Kumar et al. (2006); Tong et al. (2002).graphic file with name e-64-0m110-scheme1.jpg

Experimental

Crystal data

  • [Ag(C12H11N3O)]NO3·H2O

  • M r = 401.13

  • Monoclinic, Inline graphic

  • a = 12.177 (2) Å

  • b = 13.022 (3) Å

  • c = 8.9109 (18) Å

  • β = 94.21 (3)°

  • V = 1409.2 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.46 mm−1

  • T = 293 (2) K

  • 0.6 × 0.4 × 0.2 mm

Data collection

  • Rigaku Mercury CCD diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2003) T min = 0.503, T max = 0.742

  • 14304 measured reflections

  • 3230 independent reflections

  • 2399 reflections with I > 2σ(I)

  • R int = 0.065

Refinement

  • R[F 2 > 2σ(F 2)] = 0.042

  • wR(F 2) = 0.101

  • S = 1.06

  • 3230 reflections

  • 199 parameters

  • H-atom parameters constrained

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.43 e Å−3

Data collection: CrystalClear (Rigaku/MSC, 2003); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Sheldrick, 1999); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807064744/pk2069sup1.cif

e-64-0m110-sup1.cif (17.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807064744/pk2069Isup2.hkl

e-64-0m110-Isup2.hkl (158.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N4—H4A⋯O1Wi 0.86 2.04 2.837 (4) 154
O1W—H1WA⋯O1 0.85 1.94 2.790 (4) 174
O1W—H1WB⋯O3ii 0.85 2.04 2.886 (4) 171

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Comment

The reactions of silver(I) salts with flexible pyridyl type ligands have received considerable attention (Cordes et al., 2007; Kumar et al., 2006; Tong et al., 2002). Here, we report a new silver(I) complex (Fig. 1), which was prepared by the reaction of N-(3-pyridinylmethyl)-4-pyridine-carboxamide acting as a bidentate bridge ligand with AgNO3. In the cation, the Ag(I) atom is in a linear coordination environment and the Ag1—N1A and Ag1—N3 bond length are 2.152 (3) and 2.157 (3) Å, respectively. The N3—Ag1—N1i (i = -1 + x, 0.5 - y, 1/2 + z) bond angle is 172.55 (15) °, indicating that the N–Ag–N skeleton that gives rise to a chain structure is distorted by the presence of two Ag···Onitrate interactions. If these are regarded as formal bonds, the compound may be described as a three dimensional network structure (Fig. 2).

Experimental

An aqueous solution (5 ml) of silver nitrate (1.0 mmol) was layered carefully over a methanol (5 ml) solution of N-(4-pyridylmethyl)-4-pyridinecarboxamide (1.0 mmol) in a tube, which was covered and kept away from light. Colorless crystals were obtained after two weeks. These were washed with methanol and collected in 50% yield. CHN elemental analysis: found C 35.86, H 3.55, N 13.79%; calc. for C12H13AgN4O5: C 35.93, H 3.27, N 13.96%.

Refinement

All H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C—H distances of 0.93–0.97 Å, N—H distances of 0.86 Å and OW1—H distances of 0.85 Å, and with Uiso(H) = 1.2Ueq(C, N or O).

Figures

Fig. 1.

Fig. 1.

The structure of the title complex, showing 30% probability displacement ellipsoids and the atom-numbering scheme. Symmetry-generated atoms in the plot are related by (-1 + x, 0.5 - y, 1/2 + z).

Fig. 2.

Fig. 2.

Crystal packing viewed down the c axis.

Crystal data

[Ag(C12H11N3O)]NO3·H2O F000 = 800
Mr = 401.13 Dx = 1.891 Mg m3
Monoclinic, P21/c Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 5866 reflections
a = 12.177 (2) Å θ = 3.2–27.5º
b = 13.022 (3) Å µ = 1.46 mm1
c = 8.9109 (18) Å T = 293 (2) K
β = 94.21 (3)º Block, colorless
V = 1409.2 (5) Å3 0.6 × 0.4 × 0.2 mm
Z = 4

Data collection

Rigaku Mercury CCD diffractometer 3230 independent reflections
Radiation source: fine-focus sealed tube 2399 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.065
T = 293(2) K θmax = 27.5º
ω scans θmin = 3.1º
Absorption correction: multi-scan(CrystalClear; Rigaku/MSC, 2003) h = −15→15
Tmin = 0.503, Tmax = 0.742 k = −16→16
14304 measured reflections l = −11→11

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042 H-atom parameters constrained
wR(F2) = 0.101   w = 1/[σ2(Fo2) + (0.0433P)2 + 0.2355P] where P = (Fo2 + 2Fc2)/3
S = 1.06 (Δ/σ)max < 0.001
3230 reflections Δρmax = 0.35 e Å3
199 parameters Δρmin = −0.43 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Ag1 −0.01568 (2) 0.32484 (2) 0.11987 (4) 0.04917 (14)
N3 0.1306 (2) 0.3030 (2) 0.0011 (3) 0.0377 (7)
C9 0.1867 (3) 0.3832 (3) −0.0444 (4) 0.0453 (9)
H9A 0.1644 0.4486 −0.0176 0.054*
C7 0.2524 (3) 0.1954 (3) −0.1219 (4) 0.0426 (9)
H7A 0.2731 0.1291 −0.1467 0.051*
C8 0.1637 (3) 0.2107 (3) −0.0387 (4) 0.0448 (9)
H8A 0.1249 0.1537 −0.0087 0.054*
C11 0.3109 (3) 0.2785 (3) −0.1690 (4) 0.0321 (7)
C10 0.2755 (3) 0.3746 (3) −0.1283 (4) 0.0418 (9)
H10A 0.3120 0.4331 −0.1580 0.050*
C12 0.4107 (3) 0.2716 (3) −0.2571 (4) 0.0348 (8)
N4 0.4370 (2) 0.1789 (2) −0.3061 (3) 0.0396 (7)
H4A 0.3962 0.1273 −0.2872 0.047*
C13 0.5327 (3) 0.1630 (3) −0.3904 (4) 0.0444 (9)
H13A 0.5431 0.2231 −0.4520 0.053*
H13B 0.5188 0.1051 −0.4576 0.053*
C4 0.6375 (3) 0.1431 (3) −0.2938 (4) 0.0335 (8)
C5 0.7368 (3) 0.1578 (3) −0.3533 (4) 0.0358 (8)
H5A 0.7365 0.1849 −0.4499 0.043*
N1 0.8337 (2) 0.1358 (2) −0.2817 (3) 0.0387 (7)
C1 0.8340 (3) 0.0972 (3) −0.1428 (4) 0.0472 (9)
H1B 0.9007 0.0798 −0.0917 0.057*
C2 0.7385 (3) 0.0825 (3) −0.0737 (4) 0.0485 (10)
H2A 0.7410 0.0577 0.0243 0.058*
C3 0.6391 (3) 0.1044 (3) −0.1492 (4) 0.0413 (9)
H3A 0.5738 0.0933 −0.1038 0.050*
O1 0.4653 (2) 0.3480 (2) −0.2803 (3) 0.0550 (8)
O2 −0.0055 (2) 0.1263 (3) 0.1929 (4) 0.0669 (8)
N2 −0.0802 (3) 0.0813 (3) 0.2490 (3) 0.0427 (7)
O3 −0.1439 (3) 0.1264 (3) 0.3279 (4) 0.0735 (9)
O1W 0.6452 (2) 0.4755 (2) −0.2057 (4) 0.0624 (8)
H1WA 0.5932 0.4332 −0.2267 0.075*
H1WB 0.7033 0.4393 −0.1928 0.075*
O4 −0.0959 (3) −0.0117 (2) 0.2228 (4) 0.0702 (9)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Ag1 0.03123 (18) 0.0563 (2) 0.0621 (2) 0.00455 (13) 0.01775 (14) −0.00438 (15)
N3 0.0300 (16) 0.0400 (18) 0.0435 (18) 0.0011 (13) 0.0066 (13) −0.0052 (13)
C9 0.042 (2) 0.034 (2) 0.061 (3) 0.0054 (17) 0.0109 (19) −0.0029 (18)
C7 0.041 (2) 0.033 (2) 0.057 (2) −0.0023 (16) 0.0209 (18) −0.0077 (16)
C8 0.039 (2) 0.043 (2) 0.055 (2) −0.0071 (17) 0.0197 (18) −0.0027 (18)
C11 0.0277 (17) 0.0366 (19) 0.0319 (18) 0.0012 (15) 0.0013 (14) 0.0008 (14)
C10 0.039 (2) 0.035 (2) 0.053 (2) −0.0021 (17) 0.0105 (17) 0.0004 (17)
C12 0.0267 (18) 0.042 (2) 0.0363 (19) −0.0045 (16) 0.0048 (14) −0.0007 (16)
N4 0.0270 (15) 0.0483 (19) 0.0448 (18) −0.0020 (13) 0.0127 (13) −0.0045 (14)
C13 0.032 (2) 0.062 (3) 0.041 (2) 0.0028 (18) 0.0105 (16) −0.0027 (17)
C4 0.0324 (19) 0.0360 (18) 0.0324 (18) 0.0020 (15) 0.0060 (15) −0.0046 (14)
C5 0.0305 (18) 0.041 (2) 0.0373 (19) 0.0019 (15) 0.0103 (15) 0.0014 (15)
N1 0.0285 (16) 0.0443 (17) 0.0447 (18) −0.0018 (14) 0.0108 (13) 0.0025 (14)
C1 0.036 (2) 0.056 (3) 0.050 (2) 0.0012 (18) 0.0028 (17) 0.0017 (19)
C2 0.045 (2) 0.066 (3) 0.036 (2) 0.002 (2) 0.0075 (17) 0.0058 (18)
C3 0.037 (2) 0.048 (2) 0.041 (2) −0.0032 (17) 0.0150 (16) −0.0004 (17)
O1 0.0404 (16) 0.0537 (17) 0.073 (2) −0.0142 (13) 0.0212 (14) −0.0028 (14)
O2 0.055 (2) 0.068 (2) 0.080 (2) −0.0126 (16) 0.0235 (16) 0.0100 (18)
N2 0.0371 (18) 0.050 (2) 0.0413 (18) −0.0045 (15) 0.0028 (14) 0.0039 (15)
O3 0.066 (2) 0.076 (2) 0.082 (2) −0.0028 (18) 0.0310 (18) −0.0178 (18)
O1W 0.0471 (17) 0.0461 (17) 0.094 (2) −0.0057 (14) 0.0067 (15) −0.0046 (15)
O4 0.068 (2) 0.0443 (18) 0.098 (3) −0.0020 (16) 0.0053 (18) 0.0006 (16)

Geometric parameters (Å, °)

Ag1—N1i 2.152 (3) C13—H13A 0.9700
Ag1—N3 2.157 (3) C13—H13B 0.9700
N3—C8 1.324 (5) C4—C5 1.369 (5)
N3—C9 1.328 (5) C4—C3 1.382 (5)
C9—C10 1.363 (5) C5—N1 1.331 (4)
C9—H9A 0.9300 C5—H5A 0.9300
C7—C8 1.369 (5) N1—C1 1.336 (5)
C7—C11 1.378 (5) N1—Ag1ii 2.152 (3)
C7—H7A 0.9300 C1—C2 1.368 (5)
C8—H8A 0.9300 C1—H1B 0.9300
C11—C10 1.381 (5) C2—C3 1.370 (5)
C11—C12 1.497 (5) C2—H2A 0.9300
C10—H10A 0.9300 C3—H3A 0.9300
C12—O1 1.222 (4) O2—N2 1.220 (4)
C12—N4 1.331 (4) N2—O3 1.234 (4)
N4—C13 1.447 (5) N2—O4 1.245 (4)
N4—H4A 0.8600 O1W—H1WA 0.8499
C13—C4 1.508 (5) O1W—H1WB 0.8500
N1i—Ag1—N3 172.19 (11) C4—C13—H13A 108.7
C8—N3—C9 117.3 (3) N4—C13—H13B 108.7
C8—N3—Ag1 122.0 (2) C4—C13—H13B 108.7
C9—N3—Ag1 120.5 (2) H13A—C13—H13B 107.6
N3—C9—C10 123.3 (3) C5—C4—C3 117.3 (3)
N3—C9—H9A 118.3 C5—C4—C13 119.3 (3)
C10—C9—H9A 118.3 C3—C4—C13 123.3 (3)
C8—C7—C11 119.8 (3) N1—C5—C4 124.2 (3)
C8—C7—H7A 120.1 N1—C5—H5A 117.9
C11—C7—H7A 120.1 C4—C5—H5A 117.9
N3—C8—C7 123.0 (3) C5—N1—C1 117.8 (3)
N3—C8—H8A 118.5 C5—N1—Ag1ii 120.4 (2)
C7—C8—H8A 118.5 C1—N1—Ag1ii 121.6 (2)
C7—C11—C10 117.0 (3) N1—C1—C2 121.7 (4)
C7—C11—C12 124.8 (3) N1—C1—H1B 119.2
C10—C11—C12 118.3 (3) C2—C1—H1B 119.2
C9—C10—C11 119.6 (4) C1—C2—C3 120.0 (4)
C9—C10—H10A 120.2 C1—C2—H2A 120.0
C11—C10—H10A 120.2 C3—C2—H2A 120.0
O1—C12—N4 122.4 (3) C2—C3—C4 119.0 (3)
O1—C12—C11 120.8 (3) C2—C3—H3A 120.5
N4—C12—C11 116.8 (3) C4—C3—H3A 120.5
C12—N4—C13 121.5 (3) O2—N2—O3 121.6 (4)
C12—N4—H4A 119.2 O2—N2—O4 119.9 (4)
C13—N4—H4A 119.2 O3—N2—O4 118.4 (3)
N4—C13—C4 114.1 (3) H1WA—O1W—H1WB 105.6
N4—C13—H13A 108.7
C8—N3—C9—C10 −0.2 (6) C11—C12—N4—C13 −179.1 (3)
Ag1—N3—C9—C10 −175.6 (3) C12—N4—C13—C4 87.7 (4)
C9—N3—C8—C7 0.6 (6) N4—C13—C4—C5 −160.2 (3)
Ag1—N3—C8—C7 175.9 (3) N4—C13—C4—C3 23.9 (5)
C11—C7—C8—N3 −0.5 (7) C3—C4—C5—N1 1.0 (5)
C8—C7—C11—C10 −0.1 (6) C13—C4—C5—N1 −175.1 (3)
C8—C7—C11—C12 178.4 (4) C4—C5—N1—C1 −0.2 (5)
N3—C9—C10—C11 −0.3 (6) C4—C5—N1—Ag1ii −174.5 (3)
C7—C11—C10—C9 0.4 (6) C5—N1—C1—C2 −1.5 (6)
C12—C11—C10—C9 −178.1 (3) Ag1ii—N1—C1—C2 172.8 (3)
C7—C11—C12—O1 −171.7 (4) N1—C1—C2—C3 2.2 (6)
C10—C11—C12—O1 6.7 (5) C1—C2—C3—C4 −1.3 (6)
C7—C11—C12—N4 7.3 (6) C5—C4—C3—C2 −0.3 (5)
C10—C11—C12—N4 −174.2 (3) C13—C4—C3—C2 175.7 (4)
O1—C12—N4—C13 0.0 (6)

Symmetry codes: (i) x−1, −y+1/2, z+1/2; (ii) x+1, −y+1/2, z−1/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N4—H4A···O1Wiii 0.86 2.04 2.837 (4) 154
O1W—H1WA···O1 0.85 1.94 2.790 (4) 174
O1W—H1WB···O3ii 0.85 2.04 2.886 (4) 171

Symmetry codes: (iii) −x+1, y−1/2, −z−1/2; (ii) x+1, −y+1/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PK2069).

References

  1. Cordes, D. B. & Hanton, L. R. (2007). Inorg. Chem.46, 1634–1644. [DOI] [PubMed]
  2. Kumar, D. K., Das, A. & Dastidar, P. (2006). Cryst. Growth Des.6, 1903–1909.
  3. Rigaku/MSC (2003). CrystalStructure Rigaku/MSC, The Woodlands, Texas, USA.
  4. Sheldrick, G. M. (1997). SHELXL97 and SHELXS97 University of Göttingen, Germany.
  5. Sheldrick, G. M. (1999). SHELXTL Version 5.1. Bruker AXS Inc., Madison, Wisconsin, USA.
  6. Tong, M.-L., Wu, Y.-M., Ru, J., Chen, X.-M., Chang, H.-C. & Kitagawa, S. (2002). Inorg. Chem.41, 4846–4848. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807064744/pk2069sup1.cif

e-64-0m110-sup1.cif (17.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807064744/pk2069Isup2.hkl

e-64-0m110-Isup2.hkl (158.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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