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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2007 Dec 6;64(Pt 1):o147. doi: 10.1107/S1600536807063192

3-(1,3-Benzodioxol-5-yl)-1-phenyl-2,3-dihydro-1H-naphtho[1,2-e][1,3]oxazine

Yu-Feng Yang a, Liang-Ru Yang b, Zhi-Gang Yin c,*, Heng-Yu Qian c
PMCID: PMC2915215  PMID: 21200711

Abstract

In the title compound, C25H19NO3, the oxazine ring displays a half-chair conformation. The fused benzene ring is nearly parallel to the naphthyl ring system, the dihedral angle between this benzene ring and the naphthyl system being 8.52 (11)°. The imino group is not involved in hydrogen bonding in the crystal structure.

Related literature

For general background, see: Katayama & Oshiyama (1997); Mahajan et al. (1991); Mishra et al. (1998).graphic file with name e-64-0o147-scheme1.jpg

Experimental

Crystal data

  • C25H19NO3

  • M r = 381.41

  • Monoclinic, Inline graphic

  • a = 9.180 (3) Å

  • b = 5.7585 (18) Å

  • c = 17.320 (5) Å

  • β = 97.707 (4)°

  • V = 907.3 (5) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 291 (2) K

  • 0.30 × 0.26 × 0.24 mm

Data collection

  • Bruker SMART APEX CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.97, T max = 0.98

  • 5964 measured reflections

  • 2412 independent reflections

  • 1824 reflections with I > 2σ(I)

  • R int = 0.041

Refinement

  • R[F 2 > 2σ(F 2)] = 0.063

  • wR(F 2) = 0.134

  • S = 1.18

  • 2412 reflections

  • 265 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807063192/xu2388sup1.cif

e-64-0o147-sup1.cif (18.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807063192/xu2388Isup2.hkl

e-64-0o147-Isup2.hkl (118.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

The authors express their deep appreciation to the Startup Fund for PhDs of the Natural Scientific Research of Zhengzhou University of Light Industry, China (No.2005001).

supplementary crystallographic information

Comment

The oxazine derivatives display various applications and widespresd potential biological and pharmacological activities such as antimicrobial (Mahajan et al., 1991), antitumor (Katayama & Oshiyama, 1997) and antihistaminic (Mishra et al., 1998). In view of these important properties, we reported the crystal strucutre of the tilte compound.

The oxazine ring in the molecular is not planar. The 1,3-benzodioxole ring makes the dihedral angles of 68.24 (11)° and 8.52 (11)° with the benzene ring and the naphthyl ring, respectively, while the plane O1/C1/C10/C11 is co-planar with the naphthalene ring with the dihedral angle 1.43 (11)°. The dihedral angle between the benzene ring and the naphthalene ring is 71.48 (16)°.

Experimental

1-(Amino(phenyl)methyl)naphthalen-2-ol (1 mmol, 0.249 g) was dissolved in anhydrous methanol, the mixture was stirred for several minitutes, 1,3-benzodioxole-5-carbaldehyde (1 mmol, 0.150 g) in methanol (6 ml) was added dropwise and the mixture was stirred at room temperature for 2 h. The product was isolated and recrystallized in dichloromethane. Colorless single crystals of (I) was obtained after 4 d.

Refinement

Imino H atom was located in a difference Fourier map and positional parameters were refined, Uiso(H) = 1.2Ueq(N). Other H atoms were placed in calculated positions, with C—H = 0.93 Å (aromatic) and 0.97 Å (methylene), and refined in riding mode with Uiso(H)=1.2Ueq(C). In absence of significant anomalous scattering, Friedel pairs were merged.

Figures

Fig. 1.

Fig. 1.

The ORTEP plot of (I). Displacement ellipsoids are drawn at the 30% probability level.

Crystal data

C25H19NO3 F000 = 400
Mr = 381.41 Dx = 1.396 Mg m3
Monoclinic, P21 Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2yb Cell parameters from 912 reflections
a = 9.180 (3) Å θ = 2.1–25.1º
b = 5.7585 (18) Å µ = 0.09 mm1
c = 17.320 (5) Å T = 291 (2) K
β = 97.707 (4)º Block, colorless
V = 907.3 (5) Å3 0.30 × 0.26 × 0.24 mm
Z = 2

Data collection

Bruker SMART APEX CCD area-detector diffractometer 2412 independent reflections
Radiation source: sealed tube 1824 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.041
T = 291(2) K θmax = 28.0º
φ and ω scans θmin = 1.2º
Absorption correction: multi-scan(SADABS; Bruker, 2000) h = −12→12
Tmin = 0.97, Tmax = 0.98 k = −7→7
5964 measured reflections l = −15→22

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.063 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.134   w = 1/[σ2(Fo2) + (0.0517P)2 + 0.1645P] where P = (Fo2 + 2Fc2)/3
S = 1.18 (Δ/σ)max < 0.001
2412 reflections Δρmax = 0.21 e Å3
265 parameters Δρmin = −0.20 e Å3
1 restraint Extinction correction: none
Primary atom site location: structure-invariant direct methods

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.4757 (4) 1.2105 (7) 0.2026 (2) 0.0336 (8)
C2 0.5763 (4) 1.3803 (7) 0.1817 (2) 0.0357 (9)
H2 0.5449 1.4902 0.1438 0.043*
C3 0.7154 (4) 1.3826 (8) 0.2163 (2) 0.0394 (9)
H3 0.7794 1.4958 0.2026 0.047*
C4 0.7663 (4) 1.2181 (7) 0.2729 (2) 0.0333 (8)
C5 0.9118 (4) 1.2228 (7) 0.3104 (2) 0.0366 (9)
H5 0.9719 1.3457 0.2999 0.044*
C6 0.9709 (5) 1.0510 (8) 0.3631 (2) 0.0407 (10)
H6 1.0664 1.0603 0.3888 0.049*
C7 0.8740 (4) 0.8566 (8) 0.3752 (2) 0.0402 (9)
H7 0.9091 0.7295 0.4052 0.048*
C8 0.7357 (4) 0.8655 (8) 0.3425 (2) 0.0386 (9)
H8 0.6735 0.7503 0.3568 0.046*
C9 0.6719 (4) 1.0330 (7) 0.2877 (2) 0.0321 (8)
C10 0.5191 (4) 1.0343 (8) 0.2527 (2) 0.0376 (9)
C11 0.4128 (4) 0.8432 (8) 0.2724 (2) 0.0400 (9)
H11 0.4613 0.6936 0.2670 0.048*
C12 0.3653 (4) 0.8494 (7) 0.3526 (2) 0.0362 (8)
C13 0.4046 (4) 1.0273 (7) 0.4006 (2) 0.0328 (8)
H13 0.4569 1.1531 0.3849 0.039*
C14 0.3628 (4) 1.0156 (8) 0.4770 (2) 0.0421 (10)
H14 0.3893 1.1363 0.5118 0.051*
C15 0.2837 (5) 0.8292 (9) 0.5011 (3) 0.0461 (10)
H15 0.2581 0.8223 0.5512 0.055*
C16 0.2441 (4) 0.6531 (8) 0.4472 (2) 0.0395 (9)
H16 0.1881 0.5293 0.4613 0.047*
C17 0.2874 (4) 0.6570 (9) 0.3703 (3) 0.0441 (10)
H17 0.2642 0.5369 0.3349 0.053*
C18 0.2306 (4) 1.0885 (7) 0.2003 (2) 0.0378 (9)
H18 0.2162 1.1499 0.2515 0.045*
C19 0.0807 (5) 1.1079 (8) 0.1429 (2) 0.0411 (9)
C20 0.0568 (4) 1.2985 (8) 0.0972 (2) 0.0368 (9)
H20 0.1311 1.4084 0.0973 0.044*
C21 −0.0776 (4) 1.3335 (8) 0.0497 (2) 0.0360 (8)
H21 −0.0999 1.4701 0.0219 0.043*
C22 −0.1737 (4) 1.1502 (7) 0.0475 (2) 0.0326 (8)
C23 −0.1516 (5) 0.9640 (8) 0.0947 (2) 0.0427 (10)
C24 −0.0182 (4) 0.9259 (8) 0.1459 (2) 0.0360 (9)
H24 0.0002 0.7955 0.1773 0.043*
C25 −0.3700 (5) 0.9157 (8) 0.0285 (2) 0.0459 (11)
H25A −0.4622 0.9372 0.0491 0.055*
H25B −0.3875 0.8163 −0.0170 0.055*
N1 0.2826 (4) 0.8559 (7) 0.2088 (2) 0.0388 (8)
H1 0.246 (5) 0.740 (9) 0.182 (3) 0.047*
O1 0.3362 (3) 1.2333 (5) 0.16696 (15) 0.0380 (7)
O2 −0.3139 (3) 1.1315 (6) 0.00830 (16) 0.0414 (7)
O3 −0.2657 (3) 0.8142 (5) 0.08500 (15) 0.0392 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.039 (2) 0.030 (2) 0.0311 (18) 0.0063 (17) 0.0014 (15) −0.0124 (15)
C2 0.0389 (19) 0.037 (2) 0.0284 (16) −0.0056 (18) −0.0063 (14) −0.0042 (17)
C3 0.0299 (17) 0.043 (2) 0.047 (2) 0.0083 (18) 0.0127 (16) 0.0024 (19)
C4 0.0272 (17) 0.034 (2) 0.0397 (19) 0.0003 (16) 0.0071 (15) −0.0007 (16)
C5 0.045 (2) 0.038 (2) 0.0265 (17) −0.0072 (18) 0.0017 (16) −0.0114 (16)
C6 0.040 (2) 0.041 (2) 0.038 (2) 0.0099 (19) −0.0060 (17) −0.0057 (18)
C7 0.0345 (19) 0.041 (2) 0.044 (2) 0.0158 (19) 0.0009 (16) 0.0089 (19)
C8 0.0339 (18) 0.043 (2) 0.041 (2) 0.0136 (18) 0.0123 (16) 0.0105 (19)
C9 0.0268 (17) 0.033 (2) 0.0381 (18) 0.0110 (16) 0.0101 (14) −0.0079 (17)
C10 0.0371 (19) 0.043 (2) 0.0286 (17) −0.0135 (19) −0.0113 (15) −0.0011 (17)
C11 0.0356 (18) 0.040 (2) 0.044 (2) −0.001 (2) 0.0023 (16) −0.0123 (19)
C12 0.0419 (19) 0.0265 (19) 0.0380 (19) 0.0106 (17) −0.0025 (16) −0.0006 (17)
C13 0.0241 (16) 0.034 (2) 0.0412 (19) 0.0112 (15) 0.0079 (14) −0.0127 (16)
C14 0.046 (2) 0.045 (2) 0.0308 (18) 0.007 (2) −0.0139 (16) 0.0014 (19)
C15 0.044 (2) 0.048 (3) 0.044 (2) 0.011 (2) −0.0022 (18) 0.001 (2)
C16 0.0318 (18) 0.042 (2) 0.044 (2) 0.0108 (18) 0.0020 (16) 0.012 (2)
C17 0.037 (2) 0.044 (2) 0.052 (2) 0.0013 (19) 0.0081 (17) 0.007 (2)
C18 0.045 (2) 0.035 (2) 0.0345 (18) 0.0014 (19) 0.0093 (16) 0.0072 (17)
C19 0.046 (2) 0.035 (2) 0.040 (2) 0.0108 (19) −0.0046 (17) −0.0032 (18)
C20 0.0304 (17) 0.045 (2) 0.0375 (19) −0.0078 (18) 0.0136 (15) 0.0042 (19)
C21 0.0363 (18) 0.037 (2) 0.0359 (18) −0.0073 (18) 0.0113 (15) 0.0153 (17)
C22 0.0390 (19) 0.0253 (18) 0.0303 (16) 0.0039 (17) −0.0076 (14) −0.0012 (16)
C23 0.047 (2) 0.036 (2) 0.042 (2) −0.0057 (19) −0.0068 (18) 0.0018 (18)
C24 0.0367 (19) 0.039 (2) 0.0338 (18) 0.0135 (17) 0.0096 (15) −0.0067 (17)
C25 0.039 (2) 0.049 (3) 0.045 (2) −0.007 (2) −0.0106 (18) −0.001 (2)
N1 0.0329 (16) 0.0346 (19) 0.0460 (18) −0.0174 (15) −0.0059 (13) 0.0043 (16)
O1 0.0395 (14) 0.0368 (15) 0.0384 (14) 0.0117 (13) 0.0078 (11) 0.0163 (13)
O2 0.0378 (14) 0.0425 (17) 0.0416 (14) −0.0021 (14) −0.0035 (12) 0.0058 (14)
O3 0.0398 (14) 0.0368 (16) 0.0396 (13) 0.0003 (13) −0.0003 (11) 0.0185 (13)

Geometric parameters (Å, °)

C1—O1 1.351 (4) C14—H14 0.9300
C1—C10 1.359 (6) C15—C16 1.393 (7)
C1—C2 1.425 (6) C15—H15 0.9300
C2—C3 1.336 (5) C16—C17 1.440 (6)
C2—H2 0.9300 C16—H16 0.9300
C3—C4 1.398 (6) C17—H17 0.9300
C3—H3 0.9300 C18—N1 1.424 (6)
C4—C5 1.405 (5) C18—O1 1.456 (5)
C4—C9 1.419 (5) C18—C19 1.589 (6)
C5—C6 1.405 (6) C18—H18 0.9800
C5—H5 0.9300 C19—C20 1.354 (6)
C6—C7 1.462 (6) C19—C24 1.392 (6)
C6—H6 0.9300 C20—C21 1.403 (5)
C7—C8 1.320 (5) C20—H20 0.9300
C7—H7 0.9300 C21—C22 1.373 (5)
C8—C9 1.423 (5) C21—H21 0.9300
C8—H8 0.9300 C22—C23 1.347 (6)
C9—C10 1.452 (5) C22—O2 1.376 (4)
C10—C11 1.539 (6) C23—O3 1.350 (5)
C11—C12 1.511 (5) C23—C24 1.429 (5)
C11—N1 1.514 (5) C24—H24 0.9300
C11—H11 0.9800 C25—O3 1.401 (5)
C12—C13 1.339 (5) C25—O2 1.408 (6)
C12—C17 1.375 (6) C25—H25A 0.9700
C13—C14 1.428 (5) C25—H25B 0.9700
C13—H13 0.9300 N1—H1 0.86 (5)
C14—C15 1.391 (7)
O1—C1—C10 122.9 (4) C14—C15—C16 117.4 (4)
O1—C1—C2 115.1 (3) C14—C15—H15 121.3
C10—C1—C2 122.0 (3) C16—C15—H15 121.3
C3—C2—C1 120.4 (4) C15—C16—C17 121.9 (4)
C3—C2—H2 119.8 C15—C16—H16 119.0
C1—C2—H2 119.8 C17—C16—H16 119.0
C2—C3—C4 121.2 (4) C12—C17—C16 115.8 (4)
C2—C3—H3 119.4 C12—C17—H17 122.1
C4—C3—H3 119.4 C16—C17—H17 122.1
C3—C4—C5 121.3 (4) N1—C18—O1 110.3 (3)
C3—C4—C9 118.7 (3) N1—C18—C19 112.4 (3)
C5—C4—C9 119.8 (4) O1—C18—C19 106.2 (3)
C4—C5—C6 123.2 (4) N1—C18—H18 109.3
C4—C5—H5 118.4 O1—C18—H18 109.3
C6—C5—H5 118.4 C19—C18—H18 109.3
C5—C6—C7 116.3 (3) C20—C19—C24 125.2 (4)
C5—C6—H6 121.9 C20—C19—C18 118.8 (4)
C7—C6—H6 121.9 C24—C19—C18 116.0 (4)
C8—C7—C6 118.5 (4) C19—C20—C21 121.3 (4)
C8—C7—H7 120.7 C19—C20—H20 119.3
C6—C7—H7 120.7 C21—C20—H20 119.3
C7—C8—C9 126.8 (4) C22—C21—C20 114.6 (4)
C7—C8—H8 116.6 C22—C21—H21 122.7
C9—C8—H8 116.6 C20—C21—H21 122.7
C4—C9—C8 115.0 (3) C23—C22—C21 123.5 (3)
C4—C9—C10 120.0 (3) C23—C22—O2 107.0 (3)
C8—C9—C10 124.8 (4) C21—C22—O2 128.9 (3)
C1—C10—C9 117.0 (4) C22—C23—O3 112.5 (3)
C1—C10—C11 122.3 (3) C22—C23—C24 123.0 (4)
C9—C10—C11 120.6 (3) O3—C23—C24 124.4 (4)
C12—C11—N1 111.8 (3) C19—C24—C23 111.7 (4)
C12—C11—C10 117.1 (3) C19—C24—H24 124.1
N1—C11—C10 105.4 (3) C23—C24—H24 124.1
C12—C11—H11 107.3 O3—C25—O2 107.7 (3)
N1—C11—H11 107.3 O3—C25—H25A 110.2
C10—C11—H11 107.3 O2—C25—H25A 110.2
C13—C12—C17 125.6 (4) O3—C25—H25B 110.2
C13—C12—C11 120.2 (4) O2—C25—H25B 110.2
C17—C12—C11 114.2 (4) H25A—C25—H25B 108.5
C12—C13—C14 117.2 (4) C18—N1—C11 110.0 (3)
C12—C13—H13 121.4 C18—N1—H1 125 (3)
C14—C13—H13 121.4 C11—N1—H1 125 (3)
C15—C14—C13 122.0 (4) C1—O1—C18 113.8 (3)
C15—C14—H14 119.0 C22—O2—C25 107.2 (3)
C13—C14—H14 119.0 C23—O3—C25 105.4 (3)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU2388).

References

  1. Bruker (2000). SMART, SAINT and SHELXTL Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Katayama, H. & Oshiyama, T. (1997). Can. J. Chem.75, 913–919.
  3. Mahajan, R. N., Havaldar, F. H. & Femandes, P. S. (1991). J. Indian Chem. Soc.68, 245–249.
  4. Mishra, P. D., Wahidullah, S. & Kamat, S. Y. (1998). Indian J. Chem. Sect. B, 37, 199–200.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807063192/xu2388sup1.cif

e-64-0o147-sup1.cif (18.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807063192/xu2388Isup2.hkl

e-64-0o147-Isup2.hkl (118.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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