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Acta Myologica logoLink to Acta Myologica
. 2010 Jul;29(1):1–20.

Mendelian bases of myopathies, cardiomyopathies, and neuromyopathies

G Piluso 1, S Aurino 2, M Cacciottolo 2, F Del Vecchio Blanco 1, A Lancioni 2, IL Rotundo 2, A Torella 1, V Nigro 1,2,3
PMCID: PMC2954584  PMID: 22029103

Summary

A second genetic revolution is approaching thanks to next-generation DNA sequencing technologies. In the next few years, the 1,000$-genome sequencing promises to reveal every individual variation of DNA. There is, however, a major problem: the identification of thousands of nucleotide changes per individual with uncertain pathological meaning. This is also an ethical issue. In the middle, there is today the possibility to address the sequencing analysis of genetically heterogeneous disorders to selected groups of genes with defined mutation types. This will be cost-effective and safer.

We assembled an easy-to manage overview of most Mendelian genes involved in myopathies, cardiomyopathies, and neuromyopathies. This was entirely put together using a number of open access web resources that are listed below. During this effort we realized that there are unexpected countless sources of data, but the confusion is huge. In some cases, we got lost in the validation of disease genes and in the difficulty to discriminate between polymorphisms and disease-causing alleles. In the table are the annotated genes, their associated disorders, genomic, mRNA and coding sizes. We also counted the number of pathological alleles so far reported and the percentage of single nucleotide mutations.


Gene; symbol (OMIM) Chrom Gene size (bp) RefSeq (mRNA) Exon no. mRNA (ORF) Disease symbol (OMIM) Inh Variants(unique) Subst%
Abhydrolase domain containing 5; ABHD5 (604780) 3p21 27,000 NM_016006 7 5,370 (1,050) Chanarin-Dorfam syndrome; CDS (275630) AR H=20 80%
Acetylcholine receptor cholinergic receptor, nicotinic, alpha1 muscle; CHRNA1 (100690) 2q31.1 16,877 NM_001039523 10 2,094(1,449) Myasthenic syndrome,fast-channel congenital; FCCMS (608930) AD H=18 89%
Myasthenic syndrome,slow-channel congenital; SCCMS (601462) AD
Acetylcholinesterase collagen-like tail subunit; COLQ (603033) 3p24.2 71,618 NM_005677 17 3,007(1,368) Congenital myasthenicsyndrome with endplate acetylcholinesterase deficiency; EAD (603034) AR H=28 75%
Acid alpha-glucosidase preproprotein;GAA (606800) 17q25.3 18,324 NM_000152 20 3,847(2,859) Glycogen storage disease II; GSDII (232300) AR L=230H=284 75%
Actin, alpha 1, skeletal muscle; ACTA1 (102610) 1q42.13 2,849 NM_001100 7 1,509(1,134) Myopathy, congenital, with fiber-type disproportion; CFTD (255310) AD L=325(199)H=87 85%
Nemaline myopathy;NEM3 (161800) AD
Actin, alpha, cardiac muscle precursor; ACTC1 (102540) 15q14 7,630 NM_005159 7 3,693(1,134) Familial hypertrophic cardiomyopathy, 11; CMH11 (612098) AD H=9 O=9 100%
Actinin alpha2; ACTN2 (102573) 1q43 77,789 NM_001103 21 4,528(2,685) Cardiomyopathy, dilated, 1AA; CMD1AA (612158) AD H=5
Activin A receptor,type II-like kinase 2;ACVR1 (102576) 2q24.1 138,666 NM 001105 9 3,062(1,530) Fibrodysplasia ossificans progressiva;FOB (135100) AD H=13 92%
Acyl-Coenzyme Adehydrogenase, very long chain; ACADVL (609575) 17p13.1 5,432 NM_000018 20 2,205(1,968) Acyl-CoA dehydrogenase, very long-chain, deficiency of; VLCAD (201475) AR H=108 74%
Adipose triglyceridelipase (desnutrin);PNPLA2 (609059) 11p15.5 6,315 NM_020376 9 2071(1,515) Neutral lipid storage disease with myopathy; NLSDM (610717) AR H=8
Aldehyde dehydrogenase 3 family, member A2; ALDH3A2 (609523) 17p11.2 28,840 NM_001031806 11 3823(1,458) Spastic paraplegia, complicated recessive (Sjögren-Larsson syndrome); SLS (270200) AR H=77 57%
Alsin; ALS2 (606352) 2q33.1 80,908 NM_020919 34 6935(4,794) Amyotrophic lateral sclerosis 2, juvenile; ALS 2 (205100) AR H=12 100%
Primary lateral sclerosis, juvenile; PLSJ (606353) AR
Spastic paralysis, infantile onset ascending; IAHSP (607225) AR
Amylo-1,6-glucosidase, 4-alpha-glucanotransferase; AGL (610860) 1p21 73,900 NM_000642 34 7,368(4,599) Glycogen storagedisease IIIa; GSDIIIa (232400) AR H=91 56%
Androgen receptor; AR (313700) Xq12 180,245 NM_000044 8 4314(2,763) Androgen insensitivity;AIS (300068) XR H=363 82%
Breast cancer, male, with Reifenstein syndrome;DHTR (312300) XR
Prostate cancer; AR (176807) XR
Spinal and bulbar muscular atrophy of Kennedy; SBMA (313200) XR
Ankyrin 2; ANK2(106410) 4q25-q26 334,110 NM_001148 46 14,241(11,874) Cardiac arrhythmia, ankyrin-B-related; LQT4 (600919) AD H=10 O=15
Anoctamin 5; ANO5 (608662) 11p14.3 90,192 NM_213599 22 6,661(2,742) Limb-Girdle, Muscular dystrophy, type 2L; LGMD2L (611307) AR L=58 (28) H=2 82%
Aprataxin; APTX(606350) 9p13.3 29,018 NM_175073 9 2,086(1,029) Ataxia, Early-Onset, with Oculomotor Apraxiaand Hypoalbuminemia; EAOH (208920) AR H=15 80%
Ataxin 1; ATXN1 (601556) 6p22.3 462,378 NM_000332 8 10,636(2,448) Spinocerebellar Ataxia 1; SCA1 (164400) AD CAG repeat expansion in coding seq
Ataxin 10; ATXN10 22q13.31 173,142 NM_013236 12 3,340(1,428) Spinocerebellar ataxia 10; SCA10 (603516) AD ATTCT repeat expansion in intron 9
Ataxin 2; ATXN2(601517) 12q24.1 147,462 NM_002973 25 4,712(3,942) Spinocerebellar Ataxia 2; SCA2 (183090) AD CAG repeat expansion in coding seq
Ataxin 3; ATXN3 (607047) 14q32.12 48,069 NM_004993 11 6923(1,086) Spinocerebellar Ataxia 3; SCA3 (109150) AD CAG repeat expansion in coding seq
Ataxin 7; ATXN7 (607640) 3p14.1 138,902 NM_000333 13 7242(2,679) Spinocerebellar Ataxia 7; SCA7 (164500) AD CAG repeat expansion in coding seq
Ataxin 8 opposite strand; ATXN8OS (613289) 13q21.33 32,541 NR_002717 5 1,472(0) Spinocerebellar Ataxia 8; SCA8 (608768) AD ‘CTG*CAG’ repeat expansion in opposite genes
Atlastin GTPase 1; ATL1 (606439) 14q22.1 73,040 NM_015915 14 2,652(1,677) Spastic paraplegia 3(Strumpell disease); SPG3A (182600) AD H=27
ATPase, Ca++ transporting, fast twitch 1; ATP2A1 (108730) 16q12 26,000 NM_004320 23 3,570(2,985) Brody myopathy; 601003 AR H=8
ATP-binding cassette, sub-family C (member 9); ABCC9 (601439) 12p12.1 139,303 NM_020297 38 8,312(4,650) Cardiomyophaty, dilated, 1o; CMD1O (608569) AD H=5
BCL2-associated athanogene 3; BAG3 (603883) 10q26.11 26,446 NM_004281 4 2,608(1,728) Myofibrillar myopathy with BAG3 defect; -612954 AD L=14 (9)H=1 79%
Berardinelli-Seip congenital lipodystrophy 2 (seipin); BSCL2 (606158) 11q12.3 19,300 NM_001130702 11 2,014(1,389) Neuronopathy, distal hereditary motor, type V; HMN5 (600794) AD H=21 48%
Spastic paraplegia 17; SPG17 (270685) AD
Bridging integrator 1; BIN1 (601248) 2q14.3 59,258 NM_139343 19 2637(1,782) Centronuclear myopathy, recessive; 255200 AR
Calcium channel, voltage-dependent, beta 2 subunit; CACNB2 (600003) 10p12.33-p12.31 401.083 NM_201596 14 4,078(1,983) Brugada syndrome 4; BRUGADA SYNDROME 4 (611876) AD H=2
Calcium channel,voltage-dependent, L type, alpha 1C subunit; CACNA1C (114205) 12p13.33 644,700 NM_000719 47 13,480(6,417) Timothy syndrome/Brugada syndrome 3; TS (601005)/BRUGADA SYNDROME (611875) AD H=4
Calcium channel, voltage-dependent, L type, alpha 1S subunit; CACNA1S (114208) 1q31-q32 73,054 NM_000069 44 6,168(5,622) Hypokalaemic periodic paralysis; HOKPP1 (170400) AD L=86 (14) 100%
Malignant hyperthermia susceptibility 5; MHS5 (601887) AD
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit; CACNA1A (601011) 19p13 300,020 NM_001127221 47 8,626(6,786) Acetazolamide-responsive hereditary paroxymal cerebellar ataxia; APCA/ EA2 (108500) AD L=101 (88) 98
Calpain 3; CAPN3 (114240) 15q15.1 52,818 NM_000070 24 3,316(2,466) Limb-Girdle, Muscular dystrophy, type 2A; LGMD2A (253600) AR L=1,848 (452)H=258 60%
Calsequestrin 2 (cardiac muscle); CASQ2 (114251) 1p13.1 68,799 NM_001232 11 2,527(1,200) Ventricular tachycardia,catecholaminergic polymorphic, 2; CPVT2 (611938) AR H=11
Carboxy-terminal domain, RNA polymerase II, polypeptide A phosphatase, subunit 1; CTDP1 (604927) 18q23 74,707 NM_004715 13 3,775(2,886) Congenital cataracts, facial dysmorphism and neuropathy; CCFDN (604168) AR H=1
Carnitine palmitoyltransferase II; CPT2 (600650) 1p32.3 17,767 NM_000098 5 3,092(1,977) Carmitine palmitoyltransferase deficiency; CPT2 (255110) AR H=72 75%
Carnitine-acylcarnitine translocase; SLC25A20 (212140) 3p21.31 42,046 NM_000387 9 1,219(906) Carnitine acylcarnitine translocase deficiency; CACT Deficiency (212138) AR H=27 56%
Caveolin 3; CAV3 (601253) 3p25.3 12,955 NM_001234 2 1,420(456) Distal myopathy with caveolin defect; AD L=319 (64) H=27 O=17 (14) 92%
Familial hypertrophic cardiomyopathy, 13; CMH (192600) AD
Hyperckemia, idiopathic; CPK Elevated (123320) AD
Limb-Girdle, Muscular dystrophy, type 1C; LGMD1C (607801) AD
Long QT syndrome 9; LQT9 (611818) AD
Rippling muscle disease, recessive; RMD (606072) AR
Rippling muscle disease; RMD2 (606072) AD
Chaperone-activity of bc1 complex homolog; CABC1 (606980) 1q42.13 47,308 NM_020247 15 2,924(1,944) Spinocerebellar Ataxia 9; SCAR9 (612016)Coenzyme q10 deficiency (607426) AR
Chloride channel 1, skeletal muscle; CLCN1 (118425) 7q34 35,879 NM_000083 23 3,093(2,967) Myotonia congenita, autosomal recessive,Becker disease; MCR (255700) AR H=134 89%
Myotonia dominant (Thomsen disease); THD (160800) AD
Choline acetyltransferase isoform; CHAT (118490) 10q11.23 51,997 NM_020986 15 2,124(1,893) Myasthenic syndrome, congenital, associated with episodic apnea; CMS-EA (254210) AR H=15
Cholinergic receptor, nicotinic, beta 1 muscle; CHRNB1 (100710) 17p13.1 12,526 NM_000747 11 2,436(1,506) Myasthenic syndrome,congenital, Ie, included -; CMS1E (608931) AR H=5
Myasthenic syndrome, slow-channel congenital; SCCMS (601462) AR
Cholinergic receptor, nicotinic, gamma; CHRNG (100730) 2q37.1 6,602 NM_005199 12 2,187(1,554) Escobar syndrome; CHRNG (265000) AR L=34 (25) H=14 50%
Cholinergic receptor, nicotinic, delta; CHRND (100720) 2q37.1 9,283 NM_000751 12 1,740(1,554) Myasthenic syndrome, fast-channel congenital; FCCMS (608930) AD H=4
Myasthenic syndrome, slow-channel congenital; SCCMS (601462) AD
Cholinergic receptor, nicotinic, epsilon; CHRNE (100725) 17p13.2 5,306 NM_000080 12 2,460(1,482) Myasthenic syndrome,fast-channel congenital; FCCMS (608930) AD/AR H=89 56%
Myasthenic syndrome,slow-channel congenital; SCCMS (601462) AD/AR
Chromosome 10 open reading frames; C10orf2 (606075) 10q24.31 6,866 NM_021830 5 3,621(2,055) Progressive External Ophthalmoplegia with Mitochondrial Deletion 3; PEOA3 (609286) AD H=19
Spinocerebellar Ataxiainfantile-onset; IOSCA (271245) AR
Cofilin 2 (muscle); CFL2 (601443) 14q13.1 3,436 NM_021914 4 3,125(501) Nemaline myopathy; NEM7 (610687) AR L=17 (11) 13
Collagen, type VI,alpha 1; COL6A1 (120220) 21q22.3 23,301 NM_001848 35 4,225(3,087) Bethlem myopathy; 158810 AD L=92 (41) H=28 89%
Ullrich syndrome; UCMD (254090) AR
Collagen, type VI,alpha 2; COL6A2 (120240) 21q22.3 34,731 NM_001849 28 3,439(3,060) Bethlem myopathy;158810 AD L=145 (55)H=31 91%
Ullrich syndrome; UCMD (254090) AR
Collagen, type VI, alpha 3; COL6A3 (120250) 2q37.3 90,196 NM_004369 44 10,581(9,534) Bethlem myopathy (recessive); 158810 AR L=218 (47) H=20 93%
Bethlem myopathy; 158810 AD
Ullrich syndrome; UCMD (254090) AR
Connexin 40; GJA5 (121013) 1q21.2 17,153 NM_005266 2 3,176(1,077) Atrial fibrillation, familial, 1; ATFB1 (608583) AD H=2
Contactin 1; CNTN1 (600016) 12q12 377,737 NM_001843 24 3,427(3,057) Congenital lethal myopathy; 612540 AR 214
Crystallin, alpha B;CRYAB (123590) 11q23.1 3,124 NM_001885 3 691(528) Cataract, posterior polar 2; CRYA2(123590) AD L=47 (19)H=13 76%
Myofibrillar myopathy, alpha-B crystallin related; MFM (608810) AD
Cysteine and glycine-rich protein 3 (cardiac LIM protein); CSRP3 (600824) 11p15.1 20,012 NM_003476 6 1,341(585) Cardiomyopathy, dilated, 1m; CMD1M (607482) AD H=13
Desmin; DES (125660) 2q35 8,361 NM_001927 9 2,246(1,413) Cardiomyopathy, dilated, 1I -; CMD1I (604765) AD L=202 (57) H=52 89%
Myopathy MyofibrillarDesmin related; DRM (601419) AD
Desmocollin 2; DSC2 (125645) 18q12.1 36,445 NM_024422 16 5,197(2,706) Arrhythmogenic right ventricular dysplasia, 11; ARVD11 (610476) AD L=64 (60) H=3 O=69 61%
Desmoglein 2; DSG2 (125671) 18q12.1 50,787 NM_001943 16 5,652(3,357) Arrhythmogenic right ventricular dysplasia, 10; ARVD10 (610193) AD L=113 (92) H=23 O=107 78%
Desmoplakin; DSP (125647) 6p24.3 45,077 NM_004415 24 9,730(8,616) Arrhythmogenic right ventricular dysplasia, familial, 8; ARVD8 (607450) AD H=35 O=5 83%
Docking protein 7; DOK7 (610285) 4p16.3 31,176 NM_173660 7 2,565(1,515) Familial limb-girdle myasthenia; LGM (254300) AR L=129(34) H=19 15%
Dynactin 1; DCTN1(601143) 2p13.1 19,194 NM_004082 32 4,492(3,837) Neuronopathy, distal hereditary motor, typeVIIB; HMN7B (607641) AD H=5O=1 100%
Dynamin 2; DNM2 (602378) 19p13.2 113,825 NM_001005360 21 3633(2,613) Centronuclear myopathy, dominant; CNM (160150) AD H=7 O=6 71%
Charcot-Marie-Toothneuropathy, dominantintermediate B; CMTDIB (606482) AD
Congenital musculardystrophy with dynamin 2 defect; AD
Dynamin2 related distal myopathy; CNM (160150) AD
Dysferlin; DYSF (603009) 2p13.2 220,061 NM_001130987 56 6,771(6,360) Distal recessive myopathy (Miyoshi myopathy); MMD1 (254130) AR L=1122(415) H=151 68%
Muscular dystrophy, limb-girdle, type 2B; LGMD2B (253601) AR
Myopathy, distal, with anterior tibial onset;DMAT (606768) AR
Dystrobrevin, alpha; DTNA (601239) 18q12.1 398,555 NM_032975 22 6,522(2,061) Left ventricular noncompaction with congenital heart defects; LVNC with CHD (606617) AD H=1
Left ventricular noncompaction, familial isolated; LVNC (604169) AD
Dystrophin; DMD (300377) Xp21.2-p21.1 2,092,329 NM_004006 79 13,993(11,058) Dilated cardiomyopathy due to dystrophin defect; XLCM; CMD3B (302045) XR L=21,361 (3,793) H=1,070 O=2,898 71% of small mut.14.9%
Duchenne/Becker Muscular Dystrophies; BMD (300376); DMD (310200) XR
Early growth response 2 protein; EGR2 (129010) 10q21.3 4,367 NM_000399 2 2,974(1,431) Charcot-Marie-Tooth disease, type 1D; CMT1D (607668) AD H=10 O=12 95%
Charcot-Marie-Tooth neuropathy Type 4E; CMT4E (605253) AD
Dejerine-Sottas neuropathy; DSN (145900) AD
Electron-transfer-flavoprotein, alpha polypeptide; ETFA (608053) 15q24.2-q24.3 95,182 NM_000126 12 1,352(1,002) Multiple acyl-CoA dehydrogenase deficiency; MADD (231680) AR H=25 64%
Electron-transfer-flavoprotein, beta polypeptide; ETFB (130410) 19q13.41 21.263 NM_001985 6 915(768) Multiple acyl-CoA dehydrogenase deficiency; GAIIB (231680) AR H=12 75%
Electron-transferring-flavoprotein dehydrogenase; ETFDH (231675) 4q32.1 36,563 NM_004453 13 2,346(1,854) Glutaric aciduria type IIC; GAIIC (231680) AR H=70 89%
Emerin; EMD (300384) Xq28 2,285 NM_000117 6 1,337(765) Emery-Dreifuss muscular dystrophy, X-linked , type 1; EDMD1 (310300) XR L=324 (106) H=81 41%
Enolase 3, beta muscle specific; ENO3 (131370) 17p13.2 6,037 NM_001976 12 1,521(1,305) Glycogen storage disease XIII; GSD13 (612932) AD H=2
Epsilon-sarcoglycan;SGCE (604149) 7q21.3 70,986 NM_001099401 12 1,773(1,389) Myoclonus-dystonia syndrome; DYT11 (159900) AD L=80 (53)H=39 67%
Eyes absent 4; EYA4 (603550) 6q23.2 290,763 NM_004100 20 5,692(1,920) Cardiomyophaty, dilated, 1J; CMD1J (605362) AD H=8
Deafness, autosomal dominant 10; DFNA10 (601316) AD
Fibroblast growthfactor 14; FGF14 (601515) 13q33.1 680,920 NM_175929 5 2,829(759) Spinocerebellar Ataxia 27; SCA27 (609307) AD H=2
Filamin A, alpha (actin binding protein 280); FLNA (300017) Xq28 26,106 NM_001456 47 8,486(7,920) Cardiovalvular dysplasia, X-linked (Myxomatous valvular dystrophy); CVD1 (314400)Frontometaphyseal dysplasia; FMD (305620)FG syndrome 2; FGS2 (300321)Heterotopia, periventricular, X-linked dominant (300049)Otopalatodigital syndrome, type I; OPD1 (311300) XR L=413(83) 80%
Filamin C, gamma (actin-binding protein - 280); FLNC (102565) 7q32.1 28,845 NM_001458 48 9,137(8,178) Myopathy miofibrillarfilaminC-related; MFM (609524) AD L=1H=2 1
Four and a half LIMdomains 1; FHL1 (300163) Xq26.3 63,960 NM_001159702 8 2,706(843) Emery-Dreifuss muscular dystrophy, X-linked, type 2; EDMD6 (300696) XR L=64 (22) 82%
X-linked myopathy with postural muscle atrophy; XMPMA (300696) XR
Scapuloperoneal myopathy; SPM (300695) XD
Frataxin; FXN (606829) 9q21.11 43,515 NM_000144 5 7,168(633) Friedreich Ataxia 1; FRDA (229300) AR H=39GAA expansion 69%
Fukutin related protein; FKRP (606596) 19q13.32 12,530 NM_024301 4 3,422(1,488) Congenital muscular dystrophy and abnormal glycosylation of dystroglycan; MDC1C (606612) AR L=536(142)H=57 94%
Limb-Girdle, Muscular dystrophy, type 2I; LGMD2I (607155) AR
Muscle-eye-brain disease; MEB (253280) AR
Walker-Warburg syndrome; WWS (236670) AR
Fukutin; FKTN (607440) 9q31.2 82,988 NM_001079802 11 7,455(1,386) Dilated cardiomyopathy, 1X; CMD1X (611615) AR L=141(45) H=18 53%
Fukuyama congenital muscular dystrophy; FCMD (253800) AR
Limb-Girdle, Muscular dystrophy, type 2M; LGMD2M (611588) AR
Walker-Warburg syndrome; WWS (236670) AR
FYVE RhoGEF and PH domain-containing protein 4; FGD4 (611104) 12p11.21 143,942 NM_139241 17 8,393(2,301) Charcot-Marie-Tooth neuropathy Type 4H; CMT4H (609311) AR H=3 O=5
Galactosidase alfa;GLA (300644) Xq22.1 10,223 NM_000169 7 1,418(1,290) Fabry disease; 301500 XR H=472 73%
Ganglioside-induceddifferentiation-associated protein 1;GDAP1 (606598) 8q21.11 16,716 NM_018972 6 3,887(1,077) Charcot-Marie-Tooth disease, axonal, with vocal cord paresis; CMT4A (=CMT2H) (607706) AR H=27 O=28 74%
Charcot-Marie-Tooth disease, axonal, type 2K; CMT2K (607831) AR
Charcot-Marie-Tooth disease, type 4A; CMT4A (214400) AR
Gap junction protein, beta 1; GJB1 (304040) Xq13.1 2,010 NM_000166 2 1,654(852) Charcot-Marie-Toothneuropathy X-linked 1; CMTX1 (302800) XD H=278 O=305 83%
Déjerine-Sottas hypertrophic neuropathy - digenic with EGR2; o(145900) XR
Gigaxonin; GAN (605379) 16q23.2 65,231 NM_022041 11 4,542(1,794) Giant axonal neuropathy; GAN (256850) AR H=32 O=44
GLE1: S. Cerevisiae, homolog-like (yeast); (603371) 9q34.11 37,609 NM_001003722 16 3,341(1,980) Lethal arthrogryoposis with anterior horn cell disease; LAAHD (611890)
Lethal congenital contracture syndrome 1; LCCS1 (253310)
AR
Glucan (1,4-alpha-),branching enzyme; GBE1 (607839) 3p12.2 272,101 NM_000158 16 3,099(2,109) Glycogen storage disease type IV; GSDIV (232500) AR H=33
Glycogen phosphorylase; PYGM (608455) 11q13.1 14,326 NM_005609 20 3,615(2,529) Glycogen storage disease V; (McArdle disease) GSD5 (232600) AR H=131
Glycogen synthase3 glycogen synthase 1 (muscle) glycogen synthase 1 (muscle); GYS1 (138570) 19q13.33 25,228 NM_002103 16 3,617(2,214) Glycogen storage disease 0, muscle; GSD0b (611556) AR H=3
Glycyl-tRNA synthetase; GARS (600287) 7p14.3 39,466 NM_002047 17 2,747(2,220) Charcot-Marie-Tooth disease, axonal, type 2D; CMT2D (601472) AD H=4
Neuropathy, distal hereditary motor type V;HMNV (600794) AD
Heat shock27kDa protein 1; HSPB1(602195) 7q11.23 1,739 NM_001540 3 896(618) Charcot-Marie-Toothneuropathy, axonal, Type 2F; CMT2F (606595) AD H=6 100%
Neuronopathy, distal hereditary motor, type IIB neuronopathy, distal her; HMN2B (608634) AD
Heat shock 22kDaprotein 8; HSPB8 (608014) 12q24.23 15,956 NM_014365 3 2,001(591) Charcot-Marie-Tooth neuropathy Type 2L; CMT2L (608673) AD H=3 O=4
Neuropathy, distal hereditary motor, type IIA; HMN2A (158590) AD
Heat shock 60kDa protein 1 (chaperonin); HSPD1 (118190) 2q33.1 13,689 NM_199440 12 2,299(1,722) Leukodystrophy, hypomyelinating, 4; HLD4 (612233) AR H=1O=2
Spastic paraplegia 13; SPG13 (605280) AD
Homeobox D10; HOXD10 (142984) 2q31.1 3,178 NM_002148 2 1,803(1,023) CMT with Congenital vertical talus; CVT (192950) AD H=1
Hyperpolarization activated cyclic nucleotide-gated potassium channel 4; HCN4 (605206) 15q24.1 49,405 NM_005477 8 7,227(3,612) Sick sinus syndrome, dominant; SSS2(163800)Brugada syndrome 8 (613123) AD H=3 O=2
Immunoglobulin mu binding protein 2; IGHMBP2 (600502) 11q13.3 36,751 NM_002180 15 3,954(2,982) Spinal muscular atrophy with respiratory distress; DSMA1 (SMARD1) (604320) AR H=45 O=55 78%
Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein; IKBKAP (603722) 9q31.3 66,808 NM_003640 37 6,113(3,999) Familial dysautonomia (Riley-Day syndrome); HSAN3 (223900) AR H=3 O=4
Inositol 1,4,5-triphosphate receptor type 1; ITPR1 (147265) 3p26.1 354,491 NM_001099952 59 10,096(8,133) Spinocerebellar Ataxia 15; SCA15 (606658) AD
Integrin, alpha 7; ITGA7 (600536) 12q13.2 23,331 NM_002206 25 4,120(3,414) Congenital musculardystrophy with integrin defect; 613204 AR L=3 (3) 2
Junction plakoglobin;JUP (173325) 17q21.2 32,106 NM_002230 14 3,508(2,238) Arrhythmogenic rightventricular dysplasia,familial, 12; ARVD12 (611528) AD L=85 (39)H=1O=15
Naxos disease; 601214 AD
Kinesin family member 1B; KIF1B (605995) 1p36.22 170,896 NM_015074 47 10,579(5,313) Charcot-Marie-Tooth disease, type 1A; CMT2A1 (118210) AD H=1
Kinesin family member 21A; KIF21A (608283) 12q12 150,162 NM_017641 37 6,601(4,686) Congenital fibrosis ofthe extraocular muscles; CFEOM1(135700) AD H=11
Kinesin family member 5A; KIF5A (602821) 12q13.3 34,708 NM_004984 29 3,897(3,099) Spastic paraplegia 10;SPG10 (604187) AD H=4
L1 cell adhesion molecule; L1CAM (308840) Xq28 14,426 NM_000425 28 5,026(3,774) Spastic paraplegias, X-linkedtype 1 (MASA syndrome X-linked hydrocephalus); SPG1 (303350), HSAS (307000) XR H=179 68%
Lactate dehydrogenase A;LDHA (150000) 11p15.1 13,830 NM_005566 8 2,208(999) Glycogen storage disease XI (Lactate dehydrogenase-A deficiency); GSD11 (612933 AR H=8
Lamin A/C; LMNA (150330) 1q22 25,418 NM_170707 12 3,225(1,995) Charcot-Marie-Toothneuropathy Autosomal recessive 2B1; CMT2B1 (605588) AR L=608(252)H=142O=347 80.2%
Dilated cardiomyopathy, 1A; CMD1A (115200) AD
Emery-Dreifuss muscular dystrophy(autosomal dominant);EDMD2 (181350) AD
Emery-Dreifuss muscular dystrophy (autosomal recessive);EDMD3 (181350) AR
Hutchinson-Gilford progeria syndrome; HGPS (176670) AD
Limb-Girdle, Muscular dystrophy, type 1B; LGMD1B (159001) AD
Lipodystrophy, familialpartial, type 2; FPLD2 (151660) AD
Mandibuloacral dysplasia with type A lipodystrophy; MADA (248370) AR
Laminin, alpha 2 (Merosin); LAMA2 (156225) 6q22.33 633,423 NM_000426 65 9,690(9,369) Muscular dystrophy, congenital merosin-deficient, 1A; MDC1A (607855) AR L=550(266)H=79 67.6%
Acetylglucosaminyltransferase-like protein; LARGE (603590) 22q12.3 647,354 NM_004737 16 4,200(2,271) Muscular dystrophy, congenital, type 1D; MDC1D (608840)Walker-Warburg syndrome (236670) AR L=29 (24)H=2 79%
LIM domain binding 3; LDB3 (605906) 10q23.2 67,397 NM_007078 13 5,296(2,184) Cardiomyopathy dilated 1C; CMD1C (601493) AD L=79 (17) H=5 61%
myofibrillar myopathy ZASP-related -; MFMZ (609452) AD
Lipopolysaccharide-induced TNF alpha factor; LITAF (603795) 16p13.13 39,225 NM_001136473 5 2,565(459) Charcot-Marie-Tooth neuropathy Type 1C;CMT1C (601098) AD H=9 O=19
Lysosomal-associated membrane protein2 precursor; LAMP2 (309060) Xq24 43,201 NM_002294 9 6,587(1,233) Danon disease; Glycogen storage disease IIb; GSD IIb (300257) XD L=11 (6)H=35 57%
Member RAS-associated protein RAB7; RAB7 (602298) 3q21.3 88,663 NM_004637 5 2,232(624) Charcot-Marie-Tooth neuropathy Type 2B;CMT2B (600882) AD
Mitofusin 2; MFN2 (608507) 1p36.22 33,334 NM_014874 19 4,676(2,274) Hereditary motor and sensory neuropathy 2A;CMT2A2 (609260) AD H=50 96%
Myelin protein zero; MPZ (159440) 1q23.3 5,236 NM_000530 6 1,953(777) Charcot-Marie-Tooth disease, dominant intermediate D; CMTDID (607791) AD H=128 82%
Charcot-Marie-Tooth disease, type 1B; CMT1B (118200) AD
Charcot-Marie-Toothdisease, type 2I; CMT2I (607667) AD
Charcot-Marie-Tooth disease, type 2J; CMT2J (607736) AD
Dejerine-Sottas syndrome; DSS (145900) AD
Neuropathy, congenital hypomyelinating; CMT4E (605253) AD
Myosin binding protein C, cardiac; MYBPC3 (600958) 11p11.2 21,296 NM_000256 33 4,216(3,865) Familial hypertrophic cardiomyopathy, 4;CMH4 (115197) AD H=168C=150 71%
Myosin heavy chain 3; MYH3 (160720) 17p13.1 27,623 NM_002470 40 6,017(5,823) Distal arthrogryposis type 2A, Freeman-Sheldon syndrome; DA2A (193700) AD H=15 93%
Distal arthrogryposis type 2B, Sheldon-Hall syndrome; DA2B (601680) AD
Myosin heavy chain 6; MYH6 (160710) 14q11.2 26,288 NM_002471 39 5941(5,820) Cardiomyopathy, dilated, 1EE; CMD1EE (613252)Cardiomyopathy, familial hypertrophic; CMH14 (613251) AD H=7
Myosin heavy chain 8; MYH8 (160741) 17p13.1 31,626 NM_002472 40 6,038(5,814) Trismus-pseudocamptodactyly Syndrome; DA7 (158300)Carney complex variant; (608837) AD H=1
Myosin light chain 2; MYL2 (160781) 12q24.11 9,779 NM_000432 7 827(501) Cardiomyopathy, familial hypertrophic 10; MYL2 (608758) AD
Myosin light chain 3; MYL3 (160790) 3p21.31 5,617 NM_000258 7 877(588) Cardiomyopathy, familial hypertrophic, 8; CMH8 (608751) AD H=9 C=5
Myosin light chainkinase 2; MYLK2 (606566) 20q11.21 15,323 NM_033118 13 2,793(1,791) Cardiomyopathy, familial hypertrophic; CMH (192600) AD
Myosin heavy chain 7, cardiac muscle, beta; MYH7 (160760) 14q11.2 22,923 NM_000257 40 6,029(5,808) Dilated cardiomyopathy, 1S; CMD1S (160760) AD H=229 94.7%
Distal myopathy (Laing);MPD1 (160500) AD
Familial hypertrophic cardiomyopathy, 1; CMH1 (192600) AD
Hyaline bodymyopathy,dominant (myosin storage myopathy); 608358 AD
Myosin storage myopathy and cardiomyopathy, recessive; AR
Myostatin, growth/differentiation factor 8; GDF8; MSTN (601788) 2q32.2 7,029 NM_005259 3 2,818(1,128) Muscle Hypertrophy (601788) AD H=1
Myotilin; MYOT (604103) 5q31.2 19,995 NM_006790 10 2,271(1,497) Distal myopathy with myotilin defect; AD L=111(17) H=7 100%
Limb-Girdle, Muscular dystrophy, type 1A; LGMD1A (159000) AD
Myopathy myofibrillar(Myotilinopathy); MFM (609200) AD
Spheroid body myopathy; 182920 AD
Myotonic dystrophy protein kinase; DMPK (605377) 19q13.32 12,840 NM_004409 15 2,863(1,890) Myotonic dystrophy(Steinert disease); DM (160900) AD CTG repeat expansion in the 3’UTR
Myotubularin; MTM1 (300415) Xq28 104,568 NM_000252 15 3,434(1,812) Myotubular myopathy 1; MTM1 (310400) XR L=382 (236) H=224 68%
Myotubularin-related protein 2; MTMR2 (603557) 11q21 91,326 NM_016156 15 4,593(1,932) Charcot-Marie-Tooth disease, type 4B1;CMT4B1(601382) AR H=13 O=18
Nebulin; NEB (161650) 2q23.3 249,147 NM_001164507 182 26,200(25,578) Nemaline myopathy 2;NEM2 (256030) AR L=172(94)H=61 57%
Neurofilament, light polypeptide 68kDa; NEFL (162280) 8p21 5,660 NM_006158 4 3,602 Charcot-Marie-Tooth disease, type 1F; CMT1F (607734) AD H=30 O=19
Charcot-Marie-Toothdisease, type 2E; CMT2E(607684) AD
N-myc downstream regulated gene 1; NDRG1(605262) 8q24 60,133 NM_006096 16 3,123(1,185) Charcot-Marie-Tooth disease, type 4D; CMT4D (601455) AR H=2 O=2
Non imprinted in Prader-Willi/Angelman syndrome 1; NIPA1 (608145) 15q11.2 43,563 NM_001142275 5 6,386(765) Spastic paraplegia 6; SPG6 (600363) AD H=4
O-linked mannosebeta 1,2-N-acetylglucosaminyltransferase; POMGNT1 (606822) 1p34.1 9,768 NM_017739 22 2,753(1,983) Limb-Girdle, Muscular dystrophy, type 2O; LGMD2O AR L=143 (58) H=29 87%
Muscle-eye-brain diseas; MEB (253280) AR
Walker-Warburg syndrome; WWS (236670) AR
Optic atrophy 1; OPA1 (605290) 3q28-q29 104,667 NM_015560 31 6,345(2,883) Progressive external ophthalmoplegia, optic atrophy 1 with and without deafness; (125250) Optic Atrophy; OPA1 (165500) AD H=122 64%
Paired-like homeobox 2a; PHOX2A (602753) 11q13.4 5,099 NM_005169 3 1,716(855) Congenital fibrosis of the extraocular muscles; CFEOM2 (602078) AR H=6
Patatin-like phospholipase domain containing 6; PNPLA6 (603197) 19p13.2 27,616 NM_006702 35 4,490(3,984) Spastic paraplegia 39; SPG39 (612020) AR O=3
Periaxin; PRX (605725) 19q13 19,600 NM_020956 6 5,533(444) Charcot-Marie-Tooth neuropathy Type 4F;CMT4F (145900) AR H=10 O=22 72%
Peripheral myelinprotein 22; PMP22 (601097) 17p12 35,548 NM_000304 5 1,828(483) Charcot-Marie-Toothneuropathy Type 1A, demyelinating; CMT1A (118220) AD H=65 O=69 71%
Charcot-Marie-Toothneuropathy Type 1E; CMT1E (118300) AD
Déjerine-Sottas hypertrophic neuropathy; DSN (145900) AD
Hereditary neuropathy with liability to pressure palsies; HNPP (162500) AD
Perlecan; HSPG2 (142461 1p36.12 115,013 NM_005529 97 14,287(13,176) Dyssegmental dysplasia, Silverman-Handmaker type; DDSH(224410) AD H=32 80%
Schwartz-Jampel Syndrome; SJS1 (255800) AD
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma; PIP5K1C (606102) 19p13.3 70,264 NM_012398 18 5,047(2,007) lethal congenital contractural syndrome 3;LCCS3 (611369) AR
Phosphofructokinase, muscle; PFKM (610681) 12q13.11 40,532 NM_001166686 25 3,526(2,343) Glycogen storage disease VII; GSD VII (232800) AR H=17 94%
Phosphoglycerate kinase 1; PGK1 (311800) Xq21.1 22,657 NM_000291 11 2,421(1,254) Phosphoglycerate kinase 1 deficiency; PGK1 (300653) XR L=4 H=19 89%
Phosphoglycerate mutase 2 (muscle); PGAM2 (612931) 7p13 2,860 NM_000290 3 2,860(762) Glycogen storage disease X; GSD10 (261670) AR H=8
Phospholamban; PLN (172405) 6q22.31 12,145 NM_002667 2 1,713(159) Cardiomyophaty, dilated, 1p; CMD1P (609909 AD H=5
Phosphoribosyl pyrophosphate synthetase 1; PRPS1 (311850) Xq22.3 22,602 NM_002764 7 2,155(957) Charcot-Marie-Tooth neuropathy X-linked5 (with hearing lossand optic neuropathy);CMTX5 (311070) Deafness, X-linked 1; DFNX1 (304500) XR H=7
Plakophilin 2; PKP2 (602861) 12p11.21 106,099 NM_001005242 13 4,305(2,514) Arrhythmogenic right ventricular dysplasia, familial, 9; ARVD9 (609040) AD L=246 (161)H=74 74.4%
Pleckstrin homology domain containing,family G (with RhoGef domain) member 5;PLEKHG5 (611101) 1p36.31 53,918 NM_198681 22 5,221(3,189) spinal muscular atrophy, distal, autosomal recessive, 4; DSMA4 (611067) AR H=1
Plectin 1, intermediate filament binding protein 500kDa; PLEC (601282) 8q24.3 61,593 NM_000445 32 14,798(13,548) Epidermolysis bullosa simplex associated with late-onset muscular dystrophy; MDEBS (226670) AR H=46 52%
Epidermolysis bullosasimplex, Ogna type;EBS1(131950) AR
Poly(A) binding protein, nuclear 1; PABPN1 (602279) 14q11.2 5,971 NM_004643 7 3,075(921) Oculopharyngeal muscular dystrophy; OPMD (164300) AD H=14 7%
AR
Polymerase (DNAdirected), gamma 2;POLG2 (604983) 17q23.3 19,281 NM_007215 8 1,592(1,458) Progressive external ophthalmoplegia withmitochondrial DNA deletions type 4; PEOA4 (610131) AD H=1
Polymerase (DNA directed), gamma; POLG (174763) 15q26.1 18,490 NM_002693 23 4,447(3,720) Mitochondrial Neurogastrointestinal Encephalopathy Syndrome; MNGIE (603041) AR H=76 93%
Progressive External Ophthalmoplegia with mitochondrial DNA deletions; PEOB (258450) AR
Progressive external ophthalmoplegia with mitochondrial DNA deletions type 1; PEOA1 (157640) AD
Sensory Ataxic Neuropathy, Dysarthriaand Ophthalmoparesis;SANDO (607459) AR
Polyphosphoinositide phosphatase activity;FIG4 (609390) 6q21 134,211 NM_014845 23 3,105(2,724) Charcot-Marie-Tooth neuropathy Type 4J;CMT4J (611228) AR
Potassium inwardly-rectifying channel J2; KCNJ2 (600681) 17q24.3 10,506 NM_000891 2 5,384(1,284) Andersen Cardiodysrhythmic periodic paralysis; LQT7 (170390) AD O=39 92%
Potassium voltage-gated channel, Isk-related family, member 1; KCNE1 (176261) 21q22.12 64,625 NM_000219 1 3,320(390) Long QT Syndrome 5;LQT5 (176261) AD O=9
Potassium voltage-gated channel, Isk-related family, member 3; KCNE3 (604433) 11q13.4 12,713 NM_005472 3 3,068(312) Brugada syndrome 6 (613119) AD
Potassium voltage-gated channel, KQT-likesubfamily, member 1;KCNQ1 (607542) 11p15.5-p15.4 404,119 NM_000218 16 3,245(1,650) Long QT Syndrome 1; LQT1 (192500) AD O=90 91%
Jervell and Lange-Nielsen syndrome 1; JLNS1; (220400) AD
Potassium voltage-gated channel, shaker-related subfamily, member 1; KCNA1 (176260) 12p13 8,348 NM_000217 2 7,981(1,488) Episodic ataxia, type 1; EA1 (160120) AD
Potassium voltage-gated channel, Shaw-related subfamily, member 3; KCNC3 (176264) 19q13.33 13,870 NM_004977 5 3,176(2,274) Spinocerebellar Ataxia 13; SCA13 (605259) AD H=2
Presenilin 2; PSEN2 (600759) 1q42.13 25,532 NM_000447 13 2,298(1,344) Cardiomyopathy, dilated,1V, included; CMD1V (600759) AD H=20 95%
Presenilin 1; PSEN1 (104311) 14q24.2 87,256 NM_007318 12 6,067(1,404) Cardiomyopathy, dilated,1U, included; CMD1U (104311) AD L=1
Protein kinase C, gamma; PRKCG (176980) 19q13.42 25,435 NM_002739 18 3,128(2,094) Spinocerebellar Ataxia14; SCA14 (605361) AD H=23 0%
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit; PRKAG2 (602743) 7q36.1 321,114 NM_016203 16 3,405(987) Cardiomyopathy, familial hypertrophic, 6; CMH6 (600858) AD H=14
Protein phosphatase2 regulatory subunit B, beta isoform; PPP2R2B (604325) 5q32 491,964 NM_181677 11 2,001(1,299) Spinocerebellar Ataxia 12; SCA12 (604326) AD CAG repeat expansion in coding seq
Protein-O-mannosyltransferase 1; POMT1 (607423) 9q34.13 20,904 NM_007171 20 3,145(1,827) Limb-Girdle, Musculardystrophy, type 2K; LGMD2K (609308) AR L=324(115)H=28 78%
Walker-Warburg syndrome; WWS (236670) AR
Protein-O-mannosyltransferase 2; POMT2 (607439) 14q24.3 45,927 NM_013382 21 4,872(2,253) Limb-Girdle, Muscular dystrophy, type 2N; LGMD2N AR L=118(68) H=5
Walker-Warburg syndrome; WWS (236670) AR
Proteolipid protein 1;PLP1 (300401) Xq22.2 16,107 NM_001128834 8 3,133(729) Pelizaeus-Merzbacherdisease; PMD (312080) XR H=128 77%
Spastic paraplegia 2; SPG2 (312920) XR
Rapsyn; RAPSN (601592) 11p11.2 11,416 NM_005055 8 1,664(1,062) Myasthenic syndrome,congenital; CMS1D (608931) AR H=28 78%
Receptor accessory protein 1; REEP1 (609139) 2p11.2 124,085 NM_001164730 7 3,735(606) Spastic paraplegia 31;SPG31 (610250) AD H=6
Ribonucleotide reductase M2 B (TP53 inducible); RRM2B (604712) 8q22.3 34,.618 NM_015713 9 4,932(1,056) Mitochondrial DNAdepletion myopathy; 612075 AR H=7
Mitochondrial Neurogastrointestinal Encephalopathy Syndrome; MNGIE (603041) AR
Ryanodine receptor 1; RYR1 (180901) 19q13.2 153,864 NM_000540 106 15,390(15,102) Malignant HyperthermiaSusceptibility to 1; MHS1 (145600) AD L=653 (261)H=282 97.7%
Malignant HyperthermiaSusceptibility to 1; MHS1 (145600) AR
Central Core Disease of Muscle; CCD (117000) AD
Central Core Disease of Muscle; CCD (117000) AR
Multiminicore diseasewith external ophtalmopegia; 255320 AR
Ryanodine receptor 2; RYR2 (180902) 1q43 791,587 NM_001035 105 16,365(14,904) Arrhythmogenic rightventricular dysplasia, familial, 2; ARVD2 (600996) AD H=130 95%
Ventricular tachycardia, catecholaminergic polymorphic, 1; CPVT1 (604772) AD
Sarcoglycan, alpha;SGCA (600119) 17q21.33 9,927 NM_000023 10 1,432(1,164) Limb-Girdle, Muscular dystrophy, type 2D; LGMD2D (608099) AR L=596 (109)H=50 89.7%
Sarcoglycan, beta;SGCB (600900) 4q12 17,625 NM_000232 6 4,277(957) Muscular dystrophy, limb-girdle, type 2E; LGMD2E (604286) AR L=345 (79)H=30 68.4%
Sarcoglycan, delta;SGCD (601411) 5q33.3 441,030 NM_000337 9 9,787(873) Dilated cardiomyopathy, 1L; CMD1L (606685) AD L=76 (37) H=9 77%
Limb-Girdle, Muscular dystrophy, type 2F; LGMD2F (601287) AR
Sarcoglycan, gamma;SGCG (608896) 13q12.12 144,245 NM_000231 8 1,655(876) Limb-Girdle, Musculardystrophy, type 2C; LGMD2C (253700) AR L=473(95)H=25 49.1%
Selenoprotein N, 1; SEPN1 (606210) 1p36.11 18,047 NM_020451 7 4,332(1,773) Desmin-related myopathywith Mallory bodies; RSMD1 (602771) AD L=198(61)H=20 76%
Multiminicore disease,classical form; RSMD1 (602771) AR
Myopathy, congenital, with fiber-type disproportion; CFTD (255310) AR
Rigid spine syndrome; RSMD1 (602771) AR
Senataxin; SETX (608465) 9q34.13 93,545 NM_015046 26 11,015(8,034) Neuropathy, distal hereditary motor, with pyramidal features; Amyotrophic lateral sclerosis 4, juvenile, ALS4 (602433) AD H=27 O=3 77%
Spinocerebellar ataxia, autosomal recessive 1; SCAR1 (606002) AR
Septin 9; SEPT9 (604061) 17q25.2-q25.3 219,185 NM_001113491 12 3,823(1,761) Hereditary neuralgicamyotrophy (familial brachial plexus neuropathy); HNA (162100) AD H=3 O=3
Serine palmitoyltransferase long-chain base subunit 1; SPTLC1 (605712) 9q22.31 84,264 NM_006415 15 2,780(1,422) Neuropathy, hereditary sensory and autonomic, type 1; HSN1 (162400) AD H=4 O=4
SET binding factor 2;SBF2 (607697) 11p15.3 515,541 NM_030962 40 7,439(5,550) Charcot-marie-tooth disease, type 4b2;CMT4B2 (604563) AR H=5 O=5
SH3 domain and tetratricopeptide repeat domain 2; SH3TC2 (608206) 5q32 81,023 NM_024577 17 26,578(3,867) Charcot-Marie-Tooth neuropathy Type 4C;CMT4C (601596) AR H=19 84%
SIL1 homolog, endoplasmic reticulum chaperone; SIL1 (608005) 5q31.2 251,654 NM_022464 10 1,898(1,386) Marinesco-Sjogren Syndrome; MSS (248800) AR H=13 61%
Skeletal muscle receptor tyrosine kinase; MUSK (601296) 9q31.3 132.228 NM_005592 14 2,754(2,610) Congenital myasthenicsyndrome with MuSKdeficiency; CMS1B (608931) AR H=2
Slow troponin C;TNNC1 (191040) 3p21.1 2,950 NM_003280 6 695(486) Cardiomyopathy, dilated,1z; CMD1Z (611879) AD H=7
Slow troponin T;TNNT1 (191041) 19q13.4 16.445 NM_003283 14 1,047(837) Nemaline Myopathy 5, Amish type; NEM5 (605355) AR L=25 (12) H=1 60%
Sodium channel, voltage-gated, type IV, alpha; SCN4A (603967) 17q23.3 34,365 NM_000334 24 7,805(5,511) Hyperkalemic periodic paralysis; HYPP (170500)
Myotonia, potassium-aggravated (9608390)
Hypokalemic periodic paralysis, type 2; HOKPP2 (613345)
Myasthenic syndrome, congenital, associated with episodic apnea (254210)
Paramyotonia congenita of Von Eulenburg; PMC (168300)
AD L=613(101) 99.1%
Solute carrier family12, (potassium/chloride transporters) member 6; SLC12A6 (604878) 15q14 108,068 NM_001042495 26 7,362(3,276) Agenesis of the corpus callosum with peripheral neuropathy; (Charlevoix disease); ACCPN (218000) AR H=8 O=5
Solute carrier family 22 member 5; SLC22A5 (603377) 5q31.1 25,902 NM_003060 10 3,234(1,674) Carnitine deficiency, systemic primary; CDSP (212140) AR H=68
Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4; SLC25A4 (103220) 4q35.1 7,121 NM_001151 4 4,419(897) Progressive externalophthalmoplegia withmitochondrial DNA deletions type 2; PEOA2 (609283) AD H=6 O=7
Spastic ataxia of Charlevoix-Saguenay (sacsin); SACS (604490) 13q12.12 104,877 NM_014363 10 15,639(13,740) Spastic ataxia of Charlevoix-Saguenay; ARSACS (270550) AR H=21 48%
Spatacsin; SPG11 (610844) 15q21.1 100,982 NM_025137 40 7,787(7,332) Spastic paraplegia 11;SPG11 (604360) AR H=10
Spastic paraplegia 20 (spartin); SPG20 (607111) 13q13.3 44,870 NM_015087 9 5,013(2,001) Spastic paraplegia 20 (Troyer); SPG20 (275900) AR H=1 O=4
Spastica paraplegia 21 Acidic cluster protein, 33-kD; SPG21 (608181) 15q22.31 26,888 NM_016630 9 1,797(927) Mast syndrome (Spastic paraplegia 21); SPG21 (248900) AR H=1
Spastic paraplegia 7 Paraplegin;SPG7 (602783) 16q24.3 49,369 NM_003119 17 3,081(2,388) Spastic paraplegia 7;SPG7 (607259) AR H=14
Spastic paraplegia 4 Spastin; SPG4 (604277) 2p22.3 94,026 NM_014946 17 5,212(1,851) Spastic paraplegia 4;SPG4 (182601) AD H=237 58%
Synaptic nuclear envelope protein 1; SYNE1 (608441) 6q25.1-q25.2 515,712 NM_182961 146 27,744(26,394) Arthrogryposis multiplexcongenita with nesprin-1defect AR L=72 (28)H=5 80%
Autosomal recessive spinocerebellar ataxia, 8; SCAR8 (610743) AR
Emery-Dreifuss with nesprin-1 defect; EDMD4 (612998) AD
Synaptic nuclear envelope protein 2; SYNE2 (608442) 14q23.2 373,483 NM_182914 116 21,875(20,724) Emery-Dreifuss with nesprin-2 defect; EDMD5 (612999) AD L=12 (4) H=1 7
Spectrin, beta, non-erythrocytic 2; SPTBN2 (604985) 11q13.2 36,150 NM_006946 37 7,866(7,173) Spinocerebellar Ataxia 5;SCA5 (600224) AD H=3
Strumpellin; KIAA0196 (610657) 8q24.13 67,557 NM_014846 29 4,163(3,480) Spastic paraplegia 8; SPG8 (603563) AD H=3
Succinate-CoA ligase, ADP-forming, beta subunit; SUCLA2 (603921) 13q14.2 58,671 NM_003850 11 2,163(1,392) Mitochondrial DNA depletion myopathy, encephalomyopathic form with methylmalonic aciduria; (612073) AR H=4 O=4
Superoxide dismutase 1; SOD1 (147450) 21q22.11 9,307 NM_000454 5 963(465) Amyotrophic lateral sclerosis 1; ALS1 (105400) AD H=138 93%
Tafazzin; TAZ (300394) Xq28 10,185 NM_000116 11 1,901(879) Barth syndrome; BTHS (302060) XR H=41 70%
Cardiomyopathy, X-linked dilated; CMD3A (300069) XR
Endocardial fibroelastosis-2; G4.5 (300394) XR
Noncompaction of left ventricular myocardium, isolated; INVM (300183) XR
TATA box binding protein; TBP (600075) 6q27 18,537 NM_003194 8 1,903(1,020) Spinocerebellar Ataxia 17; SCA17 (607136) AD H=5
Tau tubulin kinase 2;TTBK2 (611695) 15q15.2 176,466 NM_173500 15 5,621(3,735) Spinocerebellar Ataxia11; SCA11 (604432) AD
Thymidine kinase mitochondrial; TK2 (188250) 16q21 42,409 NM_004614 10 5,113(924) Mitochondrial DNAdepletion myopathy;609560 AR H=18 77%
Titin; TTN (188840) 2q31.2 281,431 NM_133378 312 101,516(100,272) Autosomal dominant myopathy with proximal muscle weakness and early respiratory muscle involvement (Edstrom myopathy); HMERF (603689) AD L=60 (35) H=16 62%
Congenital myopathywith fatal cardiomyopathy; EOMFC (617105) AR
Dilated cardiomyopathy,1G; CMD1G (604145) AD
Familial hypertrophic cardiomyopathy, 9; CMH9 (188840) AD
Limb-Girdle, Musculardystrophy, type 2J; LGMD2J (608807) AR
Tardive tibial musculardystrophy (Udd myopathy); TMD (600334) AD
Titin-cap (Telethonin);TCAP (604488) 17q12 1,208 NM_003673 2 962(504) Dilated cardiomyopathy, 1N; CMD1N (607487) AD L=53 (28) H=8 75%
Limb-Girdle, Musculardystrophy, type 2G; LGMD2G (601954) AR
Tocopherol (alpha) transfer protein; TTPA (600415) 8q12.3 26,565 NM_000370 5 2,630(837) Ataxia with isolated vitamin E deficiency; TTPA (277460) AR H=19 68%
Torsin family 1,member A; TOR1A (605204) 9q34.11 11,220 NM_000113 5 2,105(999) Torsion dystonia, early onset; EOTD, DYT1 (128100) AD H=4
Transforming growthfactor, beta 3; TGFB3 (190230) 14q24.3 23,651 NM_003239 7 3,183(1,239) Arrhythmogenic right ventricular dysplasia; TGFB3 (107970) AD L=23H=2 78%
Transmembrane protein 43; TMEM43 (612048) 3p25.1 18,741 NM_024334 12 3,342(1,203) Arrhythmogenic rightventricular dysplasia, familial, 5;ARVD5 (604400) AD H=1
Transthyretin; TTR (176300)) 18q12.1 7,255 NM_000371 4 926(444) Carpal Tunnel Syndrome; CTS1 (115430) AD H=101 O=115 99%
Dysthyretinemic euthyroidal hyperthyroxinemia; 145680 AD
Familiar hereditary amyloidoses; FAP (105210) AD
Tripartite motif-containing 32;TRIM32 (602290) 9q33.1 13,999 NM_012210 2 3,719(1,962) Limb-Girdle, Muscular dystrophy, type 2H; LGMD2H (254110) AR L=27 (11) H=2 73%
Bardet-Biedl syndrome; BBS (209900) AR
Tropomyosin 1 (alpha); TPM1 (191010) 15q22.2 29,274 NM_001018020 9 1,786(855) Cardiomyopathy, dilated, 1Y; CMD1Y (611878)Familial hypertrophic cardiomyopathy, 3; CMH3 (115196) AD H=13 O=13 100%
Tropomyosin 2 (beta); TPM2 (190990) 9p13.3 7,130 NM_003289 9 1,326(855) Cap disease; NEM4 (609285) AD L=39 (17) H=3 62%
Distal arthrogryposistype 1; DA1 (108120) AD
Distal arthrogryposis type 2B, Sheldon-Hall syndrome; DA2B (601680) AD
Nemaline myopathy; NEM4 (609285) AD
Tropomyosin 3; TPM3 (191030) 1q21.3 30,320 NM_152263 10 7,096(747) Myopathy congenital,with fiber-type disproportion; CFTD (255310) AR L=52 (16) H=5 84%
Nemaline myopathy;NEM1 (609284) AD
Troponin I fast-twitch skeletal muscle isoform; TNNI2 (191043) 11p15.5 2,678 NM_003282 7 731(549) Distal arthrogryposis type 2B (Sheldon-Hall syndrome); DA2B (601680) AD L=26 (16) H=4 53%
Troponin I, cardiac muscle isoform; TNNI3 (191044) 19q13.42 5,964 NM_000363 7 839(633) Cardiomyopathy, familial hypertrophic-CMH7; CMH7 (191044) AD H=34 O=35 87%
Cardiomyopathy, familial restrictive -RCM1; RCM1(115210)Cardiomyopathy, dilated, 2A; CMD2A (611880) AD
Troponin T3, fast skeletal; TNNT3 (600692) 11p15.5 19,137 NM_006757 16 1,202(777) Distal arthrogryposis type 2B (Sheldon-Hall syndrome); DA2B (601680) AD L=13 (8) H=1
Troponin T2, cardiac; TNNT2 (191045) 1q32.1 18,663 NM_000364 14 1,152(888) Cardiomyopathy, familial hypertrophic, 2; CMH2 (115195)Cardiomyopathy, dilated, 1D; CMD1D (601494) AD H=53 O=31 91%
Tyrosyl-DNA phosphodiesterase 1;TDP1 (607198) 14q32.11 88,861 NM_018319 17 3,745(1,827) Spinocerebellar Ataxiawith axonal neuropathy; SCAN1 (607250) AR H=2
Tyrosyl-tRNA synthetases; YARS (603623) 1p35.1 42,794 NM_003680 13 3,117(1,587) Charcot-Marie-Toothneuropathy, dominantintermediate C; CMTDIC (608323) AD H=3
UDP-N-acetylglucosamine-2- epimerase/N-acetylmannosamine kinase; GNE (603824) 9p13.3 62,601 NM_001128227 12 5,283(2,262) Inclusion body myopathy 2; IBM2 (600737) Nonaka Myopathy; NM (605820) AR H=60
Vacuolar H+-ATPasehomolog; VMA21 (310440) Xq28 12,179 NM_001017980 3 4,735(306) Myopathy with excessive autophagia; MEAX (310440) XR L=28 (7)H=6 50%
V-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian);ERBB3 (190151) 12q13.2 23,236 NM_001982 28 5,510(4,029) lethal congenital contracture syndrome 2; LCCS2 (607598) AR
Vesicle-associatedmembrane protein-associated protein B and C; VAPB (605704) 20q13.32 57,717 NM_004738 6 3,673(732) Amyotrophic lateral sclerosis; ALS8 (608627) AD H=1
Vinculin; VCL (193065) 10q22.2 122,041 NM_003373 21 5,280(3,201) Cardiomyopathy, familialhypertrophic, 15; CMH15 (613255) AD H=1
Voltage-gated potassium channel,subfamily H, member2; KCNH2 (152427) 7q36.2 32,965 NM_000238 15 3,896(3,480) Long QT Syndrome 2; LQT2 (152427) AD O=98 77%
Voltage-gated sodiumchannel type V alpha;SCN5A (600163) 3p22.2 101,610 NM_198056 28 8,503(6,051) Brugada syndrome 1 (601144)
Cardiomyopathy, dilated, 1E; CMD1E (601154)
Long QT syndrome 3 (603830)
Progressive familial heart block, TYPE IA (113900)
AD O=20 80%
Zinc finger protein 9; CNBP/ ZNF9 (116955) 3q21.3 16,152 NM_001127192 5 3,383(534) Myotonic dystrophy; DM2 (602668) AD CCTG repeat expansion in intron 1
Zinc finger, FYVE domain containing 26,spastizin; ZFYVE26 (612012) 14q24.1 70,070 NM_015346 42 9,675(7,620) Spastic paraplegia15 (Kjellin syndrome);SPG15 (270700) AR O=4
Zinc finger, FYVE domain containing 27;protrudin, ZFYVE27 (610243) 10q24.2 23.786 NM_144588 13 3,048(1,236) Spastic paraplegia 33;SPG33 (610244) AD H=1

Legenda

Abbreviations

Gene; symbol (OMIM)

indicates the official name of the gene, the symbol and the number as in the Online Mendelian Inheritance in Man database (3).

Chrom

indicates the chromosomal position assigned by the GRCh37/hg19 release at http://genome.ucsc.edu/cgi-bin/hgGateway.

Gene size

indicates the total size in base pairs of the most relevant transcript of the gene (for example, for the dystrophin gene we considered the skeletal muscle promotor and the 427kDa product).

RefSeq (mRNA)

is the official number of the most relevant gene product.

Exon no.

is the number of exons.

mRNA (ORF)

is the length of the mRNA and within brackets the length of the open reading frame also counting the first stop codon.

Disease symbol (OMIM)

indicates the official name of the associated disorders, the symbol and the number as in the Online Mendelian Inheritance in Man (3).

Inh

indicates the disease inheritance AR = autosomal recessive; AD = autosomal dominat, XR = X-linked recessive, ecc.

Variants (unique)

is the number of total variants (unique) reported in the Leiden database (L) Human Genome Mutation Database (H) or other specifica databases (O).

subst%

indicates the percentage of substitutions of mutated alleles found in patients: this may be important to address the strategy for mutation scanning.

Databases

  • 1.Alzheimer Disease & Frontotemporal Dementia Mutation Database (http://www.molgen.ua.ac.be/ADMutations/)
  • 2.ARVD/C Genetic Variants Database (http://www.arvcdatabase.info/)
  • 3.The Human Genome Mutation Database (www.hgmd.org)
  • 4.Cardiogenomics: Sarcomere Gene Mutation Screening (http://cardiogenomics.med.harvard.edu/project-detail?project_id=230)
  • 5.FHC Mutation Database (http://www.angis.org.au/Databases/Heart/heartbreak.html)
  • 6.The Gene Connection for the Heart (http://www.fsm.it/cardmoc/)
  • 7.Database on Transthyretin Mutations (http://www.ibmc.up.pt/mjsaraiva/ttrmut.html)
  • 8.The Mutation Database of Inherited Peripheral Neuropathies (IPNMDB) (http://www.molgen.ua.ac.be/CMTMutations/)
  • 9.Leiden Muscular Dystrophy pages (http://www.dmd.nl/)
  • 10.MOONEY Laboratory MutDB (http://mutdb.org/)
  • 11.Online Mendelian Inheritance in Man(OMIM) (http://www.ncbi.nlm.nih.gov/omim/)
  • 12.ALSOD - The Amyotrophic Lateral Sclerosis Online genetic Database (http://alsod.iop.kcl.ac.uk/Als/Index.aspx) [DOI] [PubMed]
  • 13.The Androgen Receptor Gene Mutations Database WWW Server (http://androgendb.mcgill.ca/)
  • 14.Mutation Database of the Protein Kinase C (http://www.retina-international.org/sci-news/prkcgmut.htm)
  • 15.The DMD mutations database UMD-DMD France (http://www.umd.be/DMD/W_DMD/index.html)
  • 16.Zhejiang University Center for Genetic and Genomic Medicine (http://www.china-hvp.org/LOVD/?select_db=CAV3)
  • 17.The Long QT syndrome Database (http://www.ssi.dk/graphics/html/lqtsdb/lqtsdb.htm)

Articles from Acta Myologica are provided here courtesy of Pacini Editore

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